Oryzias melastigma (Indian medaka): 112161446
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Entry
112161446 CDS
T07439
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112161446 (six2a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
112161446 (six2a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
112161446
NCBI-ProteinID:
XP_024152312
Ensembl:
ENSOMEG00000012151
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Position
LG15:2412312..2416508
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AA seq
290 aa
AA seq
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MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLTSSMNGNKTLLGSSDDEKTPSGTPDHTSQSPALLLGSTA
GLPSLHGLAPPPGPSAIPVPGGADSVHHHHSLHHETILNPMSSNLVDLGS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcttccgacctttggttttacgcaggagcaagtggcgtgtgtctgcgaagtc
ctccaacaagggggcaacatcgagcggctgggacgcttcctctggtccctcccggcgtgc
gagcacctccacaaaaacgagagcgtcctcaaggcgaaagccgtggtcgccttccaccgg
ggcaacttccgagagctgtacaagatcctggagagccaccagttctccccgcacaaccac
ccgaagctgcagcagctgtggctgaaagcgcactacatcgaggcggagaagctgaggggc
cgcccgctgggcgccgtcgggaagtaccgcgtccggagaaagttccccctgccccgctcc
atctgggacggagaggagaccagctactgcttcaaggagaagagcaggagcgtcctgcgg
gagtggtacacccacaacccctatccgtccccgcgggagaaacgagagctggccgaggcc
acgggactcacgaccacgcaggtcagcaactggttcaaaaaccgacggcagcgggatcga
gccgccgaggcgaaggaaagagaaaacaacgaaaactccaacagcaacagtcacaaccct
ctgacttcttctatgaatggaaataaaactcttttggggagctcggatgacgagaaaacc
ccctccgggactccggatcacacgtcccagagccccgctctgctcctgggctccaccgcc
ggtttaccgtccttacacggcctcgcgcctccgccgggacccagcgccatcccggtgccc
ggcggcgcagactcggtgcaccaccaccactctttgcaccacgaaaccatactgaaccct
atgtcttcaaatctagtggacctcggctcttaa
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