KEGG   Oryzias melastigma (Indian medaka): 112161446
Entry
112161446         CDS       T07439                                 
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
  KO
K19472  homeobox protein SIX2
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oml03000]
    112161446 (six2a)
Transcription factors [BR:oml03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    112161446 (six2a)
SSDB
Motif
Pfam: SIX1_SD Homeobox_KN Homeodomain HTH_3 YdaS_toxin HTH_72 Phage_mat-A
Other DBs
NCBI-GeneID: 112161446
NCBI-ProteinID: XP_024152312
Ensembl: ENSOMEG00000012151
LinkDB
Position
LG15:2412312..2416508
AA seq 290 aa
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLTSSMNGNKTLLGSSDDEKTPSGTPDHTSQSPALLLGSTA
GLPSLHGLAPPPGPSAIPVPGGADSVHHHHSLHHETILNPMSSNLVDLGS
NT seq 873 nt   +upstreamnt  +downstreamnt
atgtcaatgcttccgacctttggttttacgcaggagcaagtggcgtgtgtctgcgaagtc
ctccaacaagggggcaacatcgagcggctgggacgcttcctctggtccctcccggcgtgc
gagcacctccacaaaaacgagagcgtcctcaaggcgaaagccgtggtcgccttccaccgg
ggcaacttccgagagctgtacaagatcctggagagccaccagttctccccgcacaaccac
ccgaagctgcagcagctgtggctgaaagcgcactacatcgaggcggagaagctgaggggc
cgcccgctgggcgccgtcgggaagtaccgcgtccggagaaagttccccctgccccgctcc
atctgggacggagaggagaccagctactgcttcaaggagaagagcaggagcgtcctgcgg
gagtggtacacccacaacccctatccgtccccgcgggagaaacgagagctggccgaggcc
acgggactcacgaccacgcaggtcagcaactggttcaaaaaccgacggcagcgggatcga
gccgccgaggcgaaggaaagagaaaacaacgaaaactccaacagcaacagtcacaaccct
ctgacttcttctatgaatggaaataaaactcttttggggagctcggatgacgagaaaacc
ccctccgggactccggatcacacgtcccagagccccgctctgctcctgggctccaccgcc
ggtttaccgtccttacacggcctcgcgcctccgccgggacccagcgccatcccggtgccc
ggcggcgcagactcggtgcaccaccaccactctttgcaccacgaaaccatactgaaccct
atgtcttcaaatctagtggacctcggctcttaa

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