Oryzias melastigma (Indian medaka): 112161468
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Entry
112161468 CDS
T07439
Symbol
ptpn20
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 13 isoform X1
KO
K23955
FERM and PDZ domain-containing protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112161468 (ptpn20)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Other domain-containing proteins
FERM domain-containing proteins
112161468 (ptpn20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
Y_phosphatase
PDZ_6
PDZ_2
FERM_M
FERM_N
FERM_C
KIND
Tc-R-P
DUF6288
DSPc
PTP-NADK
Y_phosphatase3
SNX17-27-31_F1_FERM
RA_2
PTP-SAK
PI3K_P85_iSH2
PhyR_sigma-like
Motif
Other DBs
NCBI-GeneID:
112161468
NCBI-ProteinID:
XP_024152345
LinkDB
All DBs
Position
LG15:complement(23006534..23034987)
Genome browser
AA seq
2376 aa
AA seq
DB search
MSSTFVTLAEVLEARGGPLLEEEVWSLLLGAAECLMDISYRGHNNMCSIISPTTLLLSAT
GSLAFKNCGLSDEVSTFAAPEMLQDQASSTKPATDRMLVYSLGMTLYWSVDFQLSQNQPV
QLSDHLNSLLLSMCEDLAHRRVNLNSILEACESQLKASMLLPPAKIIKQLVEEVFHESMD
QSSLPDSSVPLSGRSQMIRERLHGKRGPFSDFSDGSAEGRRYSTDSDSKSGSLPQRPWRQ
RPRSSPTVLYQSSLERLHRGVHRRDSNSSWLGRSPHHDFSPKISGRSHSPSITFSESSLS
LSQRKAKALGPEFIRMPDEQQILLELPGSIVSRKGHSSASQREVTVVLPNGQYMVVRCDI
KSRARDVFDMVVAHANLVEHFYFGLSFLDDDEYFFLDHETKISKVAPDSWKKGQISSFVV
FLRVKFFVDDISFILHRLTRHQYYLQLRKDILEDRLYCNEETGLFLAALALQVEFGDYMP
ELYGKNYYQPEYYVSRRMLEKLAVPIIREELPRLHASHAHLLPEEAEIEYLKIVQQLPEY
GVMFHRVGREKRPVIGELILGVCAKGTIVYENKNHIRTVTRRFLWRETDSISTGRRKLVI
ECGGPSGKKHSFVTESTKIAQYLLNLCSAQHKFHSEMTSRQLNHTMIPDENISAYRARSM
SLKRISCSEGMLNHVGLAPGQRDSISKSCEDLTAKLEARLRQQREMRREMSRELNKEVPE
AGDLRDVKERPCWSSPGTIPRMMSTVSLQKQDSDFSSIRVDTPTKNPPEREIVCVSLKKD
PKLGFGFVIVGEDSTGKLDLGIFIASIVPDGPADKDGRIKPGGRLISLNKTSLEGVTFSD
AAAILQSSPDEVELIVSQPKQSLKDRQRSLSQSTLGLSMEKSFGSQTTLSGIEFRPAVEE
LEEAITLSNMATPKQKRKLHIPVVRIQDAQDVRPRSPSILSLKTGERFTVELRKSSGSLG
ISVAGGINTGVRYGGIYIKSLVPRGAAEQDGRIQIGDRLLEVDGSNLRGVTHQQAVECLK
RTGEVVNLLLEREPTLVFEPRSDSPCPVLVHSPSHMQPPRTEASMETTLSSRARDYSFVT
DDNTHEVVLKKSLSGLGFSFYISQLCSGADRCSVVRIKRLFPGQPAQESGLLREGDVILA
VNNERVKDLSYQRVLFLLRGAPSTVHLLICRPVAGVLCDVDDNTLSLASVRGVRSRSLDI
RLGEDYSRFLKSPDDNIGPAQIVPPVKDEDLTTEKNLEFPPPPPPFPSPPPESHQSFSSE
AQANKTFPSPPRTPPSPTSPPSPPSPVSPASPASPASPSLPSSPVSASPPAPTEQQLTSG
TQRTQSDEEAERRNKAEVEEAATTLSTTVMLMDISPKTGSKPLYTSGVREEADGSVTYCL
MGNGLTIMEDEEYLTISSTLEPPHNVPTNITPESNLSDLSSQIPRAFQNPNLSPHITASP
LSFSTDTPTTCSLSHPSQPLTTQPPKAKDHPIQQGLLPSQYKAASKNIRPTVPPPQPPPT
PITAQIIASVPPCAGTPAPMLLSAAPLSPGLIQPREEPERRRREYKDDNEEELDEEEEES
RRKGIVKEFELSVVLTKSRSGSFGFTITRSKLDNCYYIQEILDNPAKADGRLRAGDRLVT
VNGHNVTSVTDDVAMTILRSSPRRLSMTLGRAVSNLVAPPPCDSLPDVVLHKTPSGQLGI
KLTGGIGSKWQGIYCLEVVPGSPASEEGSVQPNDKILYICGRCTLGMTLEDAVKACEIAP
RKVKLKVIREEQPVTPKAKWNVGLFDWKRDRKFFARFEEPVPPEREFPTEDTEAASRSTK
KYRCLSLVQEKDSCIMQVEFKKPEGGGLGFALVGGTNGSMLRVKEICSGGAAEQDGRLKV
GDILLEVNGVIVSGLSHGKVVDILRKAEGAVQLTICRDILPLTYSESPTPPNMSAHPEVF
QTEIKTSVSSPDPCCTPVALSRPVERPPEPTPDPVLIEAEVILTPPPPPPHRLTVVTDEA
SVEEKSCNNTPSHQACCPSLNVTDMLHGASDRTQIVTKLLDQSCKDIHKAQSDSWSSEDD
DVFDATCQEVSSSQTGPPLVTQEELASLALITPAKTSQYSGSRVKALIQILQHQLDQQEL
VKEFMALEHLKPSDDCLVGKAPENREKNRYRDILPYDKTRVALGENQDYINASYIRMKVG
AEEFFYISCQGPLPSTVPAFWQMVWENKSDVIAMMTQELERGRIKCHKYWPEKQDVPLDT
GKYRLHLENQQYLEYFHIKVIRIVEAETGETHFVHHLKFTHWPDHGVPHCSEELVRFIRY
MRALHHRGPITVHCSAGIGRTGVLICTDIILNLIEKDLNINVSDIVKEMRLQRHGMIQTK
EQYLFCYKVWLEVLQGILQLQGNQWQPESPRDHKVV
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacatttgttactttagctgaggtactggaggcgcgagggggacctctgctg
gaggaggaggtgtggtctttgctgctgggtgctgcagagtgtttaatggatatttcatat
aggggtcacaacaacatgtgcagtatcatcagcccaaccacgctgctgctgtcagccact
ggaagcttagcatttaagaactgtggcctgtcggatgaggtttctacctttgctgctcca
gagatgctgcaagaccaagccagctcaaccaaacctgccacggataggatgctggtgtat
tctctgggaatgactctctactggtcagttgattttcagctttctcaaaatcagcctgtc
cagttgagtgaccatctgaacagcctcctgctcagcatgtgtgaggacctggcccaccgc
agggtaaatctcaactccatcctggaagcctgtgaatctcagttaaaagcctccatgctg
ctgccccctgccaaaatcatcaaacagctcgtggaggaggttttccatgaatcgatggac
cagagctcgctgccagacagcagcgttcctctaagtggaaggagccagatgatcagagaa
agacttcatggaaagcgagggccgttttcagacttcagcgatggtagtgctgaagggagg
aggtactccacagactcggattcaaagtcagggagtctgcctcagagaccttggaggcag
agaccgagaagctctcccacagtgctgtaccagtcatctttagagagactccatcgtggt
gtccatcgcagagatagcaacagcagttggctgggaagaagccctcatcacgatttctcc
cccaagatatcaggcagatctcacagcccgtccatcaccttcagtgagtcctcgctcagc
ctgagtcagagaaaagcaaaggcactgggtcctgagttcataagaatgccagacgaacag
caaatcctgcttgagcttccaggatctattgtgtccagaaagggccattccagtgcgtct
cagagagaagtgactgtagtgctgcctaacggacagtacatggttgtgcgctgtgacatt
aaatccagagcgagagatgtgtttgacatggtggtggctcacgcaaacttggtggagcac
ttttactttggtctttccttcctagatgatgatgaatacttcttcttggaccatgaaaca
aaaatctccaaagttgcacctgatagttggaaaaaaggccaaatatcttcctttgtggtg
tttctccgagtcaaattttttgttgatgatatctcctttattctgcacagactgactcgt
caccagtattacttacagctgcgtaaggatatcctagaggacagactttactgcaacgag
gagacgggcttgttcctggctgctcttgctcttcaggtcgagtttggtgattacatgcca
gagttgtatgggaagaattattaccagccagagtactatgtgtccagaaggatgctggag
aagcttgctgtgcccatcatcagggaggagttaccaaggcttcacgcaagccacgcccat
ttattaccagaagaggcagaaattgagtacttaaagattgtccaacagctgccagagtac
ggagttatgttccaccgagtgggacgagagaaaaggccggtgattggagagttaattttg
ggagtctgtgccaagggaactattgtctatgaaaacaagaaccacatcagaaccgtcacc
aggcgcttcctgtggagagagactgactccatatcaactgggaggcgtaaactggttatt
gaatgtggtggaccaagtggaaaaaagcacagttttgtgacagagagcacaaaaatagca
cagtacctccttaacctctgctcagcacaacacaagtttcacagtgagatgacgtcacgg
cagctgaaccacaccatgatacctgatgaaaacatttctgcctacagagcccgcagcatg
agcctgaagagaatatcttgctctgaaggcatgttgaaccacgtgggtttggcaccgggg
cagcgggactccatctccaaatcctgcgaagatctaacggccaagcttgaagctcggctc
cggcagcagcgagagatgaggagggaaatgagcagagagctgaacaaggaggtgcctgaa
gcaggagacctcagggatgtgaaagagcgaccgtgttggagttctccagggacgattccc
agaatgatgtccaccgtctcactacagaagcaggactctgatttctcctccatacgagtt
gacacaccaaccaagaatccaccagaaagagagattgtctgtgtttcactgaaaaaagat
cccaaattgggttttgggtttgttatagtgggagaggacagcacaggaaaacttgacctg
ggaatctttattgcctctattgtgcctgatgggcctgcagacaaagatggacgaatcaaa
cctggtgggcgtctcatctccttaaacaagaccagtttggaaggcgtgaccttcagcgac
gctgccgccatcctccagagcagcccagacgaagtggagctcatcgtgtcccagcctaaa
cagtctctgaaggacagacagcgctctctgagtcaaagtactcttggattatcaatggag
aagagcttcggatcacagaccaccttgagtggcattgagttccgtcctgctgtggaggag
ctggaggaggccatcacactgtccaacatggcaacaccaaaacaaaagaggaagctccac
attcctgttgtcagaatacaggatgcccaggatgtgcgtccgagatccccgtccatctta
agccttaaaacaggagagaggtttacagtggagctcaggaagagcagtggtagccttgga
atcagcgttgctggtggaataaacactggcgtgcgatatggagggatttatatcaagagc
ctggtgccaagaggtgctgctgaacaggacgggcgcattcagatcggtgacagactgctg
gaggttgatgggtccaacctgaggggagtgactcaccaacaagctgtcgagtgcctgaag
aggaccggggaggtggtgaacctgctgttggagagggagcccacactagtctttgagccc
agatctgactcaccctgccctgtcttggtccacagtccatcacacatgcagccccccagg
actgaagcctccatggaaacgaccttgagtagtcgagccagggactacagctttgtcact
gatgataacactcatgaagttgtcctgaagaaaagcctgtctggtctcggcttcagcttc
tacatctcacagctgtgttcgggagcagaccgctgcagcgtggtccgcatcaaacgtctg
ttcccgggtcagcccgctcaggaaagtggcctcctgcgagagggagacgttattctggcc
gtcaacaatgaacgggtcaaagatctctcctaccagagagttttgttcctgctccgcgga
gctccatctacagttcatctgctgatctgtcgacccgttgctggagtgctgtgcgatgtc
gatgataacacattgagtcttgcatctgtgcgcggggttcgatcccgctctctggacatc
cggcttggtgaggactacagccggttcctgaagtctccagatgataacattggacctgcc
caaattgttccccccgtcaaggacgaggatctgaccactgagaaaaacctggagtttcct
cctcctcctcctccttttccttctccacctccagagagccaccaaagttttagcagtgaa
gctcaagccaataaaacgttcccatcgcctcctcgaacgccaccttcacctacatcacca
ccatctcctccatcgccagtctccccagcctcgccggcttcacctgcctcaccttcttta
ccctcctcacctgtgtctgcatctccaccggctccaacggagcaacagttgacttctggg
acgcaaaggacccaaagtgacgaggaagctgaaagacggaacaaggcggaggtggaggag
gctgcaacaacactgagcaccacagtaatgcttatggatatttcccccaagacaggctcc
aaacctttgtacaccagtggcgtcagagaggaggcagatggaagtgtgacctactgcctt
atggggaatggactgaccatcatggaggatgaggagtacctgaccatcagctccacactg
gagcctcctcacaacgttcccaccaacatcacaccagaaagcaacctctcagacctcagc
tcacagatccctcgtgcttttcagaacccgaacctcagcccccacattactgcctcaccc
ctcagcttctcaactgacacccccaccacctgctcgctgtctcacccgtctcagcccctc
accacacaacctccaaaagccaaggaccatcccatccaacaggggcttcttccgagccaa
tataaagctgcttccaaaaacatcaggcccaccgtacccccacctcagccaccgccgacc
cccatcacagcccagattattgcctctgtgcctccctgtgccggtacgcctgcaccaatg
ctgctgtccgcagcaccgctgtctcccgggctgatccagccgagagaggaaccagagagg
agaagaagggaatacaaggatgataatgaggaggaactggacgaagaggaggaggagagt
cggagaaagggcattgtaaaagagtttgaactttccgtggttttgaccaagtccagaagt
ggaagttttggttttacgatcactcggagcaaactggacaactgctactacatacaagaa
atactggacaacccagccaaggcagacggacgcctcagggcaggagaccggctcgtcaca
gtaaatggccataatgtcacaagtgtgacagatgatgttgccatgacgattctcaggtca
tctccaagaagattgagcatgactttggggagagctgttagcaacctggtggcgccgcct
ccctgcgacagcctgcctgatgttgtcctccacaaaacgccttcaggacagctgggaata
aaactgacaggtggcataggcagcaaatggcagggaatctactgtttggaggtggtgcca
ggctctccagccagcgaggagggcagtgtccaacccaacgacaaaatcctgtacatctgc
ggcaggtgcaccctgggcatgaccttagaggatgcagtcaaagcctgtgagattgcccct
cgaaaagtcaaactgaaagtcatcagagaggaacagcccgtaactcctaaggctaagtgg
aacgtaggcctgtttgactggaaaagagacaggaagttttttgctcgttttgaagagcct
gtccctccagagagagagtttcccactgaagatactgaagctgcatctaggagcacaaag
aagtatcgatgcctctctctcgtccaagagaaagatagttgcatcatgcaagtggagttc
aaaaaaccagagggtgggggccttggctttgctttggtggggggaaccaatggcagcatg
ctgagagtgaaagaaatctgctctggtggagcagccgagcaggacggacgactaaaagtg
ggcgatattcttctggaggtgaatggggtcattgtgtctgggctgagtcatgggaaggtg
gtggacatcttgagaaaggccgagggggccgttcaactcaccatctgcagggatatcctc
ccactcacctactcagagtcaccaacaccgcccaacatgtctgctcaccccgaagtcttt
caaacggagatcaagacgtccgtgtccagtcctgatccctgctgcacacctgtcgcactg
agcagaccagtcgaacgccccccagagccaaccccagacccagtgcttatcgaagcagag
gtcatcctaaccccacccccaccccctcctcacaggctcaccgtagtaacagatgaagct
tcagttgaagagaagagttgcaacaacacaccttctcatcaagcttgctgcccatccctc
aatgtcactgacatgttgcatggagcctctgacaggacacagattgtgaccaaacttttg
gatcagtcttgtaaagacatccacaaagctcagtcagatagctggagcagcgaggatgat
gacgtgtttgacgcaacatgccaggaagtgtcttcttcacaaacaggtccaccgctggtc
acacaggaggagctggccagcctggcactcatcacacctgccaagaccagccagtattca
ggttccagggtcaaagctctcatccagattctgcagcatcagctggaccagcaagaactg
gtcaaagagttcatggccttggagcatcttaaaccttctgatgattgtctggtgggaaaa
gcccctgagaacagagaaaagaaccgctacagagacattctaccctatgataaaacgcgt
gttgcacttggagagaaccaggactacatcaacgcaagctacatccgcatgaaagttgga
gcagaggagttcttttacatctcctgccaggggcctctgccttccacggtgcccgccttc
tggcaaatggtctgggaaaataaatcggacgtcattgccatgatgacccaggagctggaa
cggggaaggatcaaatgtcacaagtactggcctgaaaagcaagatgtgcctttggacacg
ggcaagtaccggctccacctggagaaccaacagtacctggaatacttccacattaaagtc
atccgcattgtggaggcagagacgggcgagacacactttgttcatcacctcaagttcaca
cactggcctgaccacggcgtgccacactgctctgaagagcttgtgcgcttcatccgctac
atgagagcgctgcatcacagggggccaatcaccgtccactgcagcgccggcatcgggcgc
acgggagtcctcatctgcactgacatcatcctgaacctcattgagaaagacctgaatatt
aatgtgagtgacatcgtgaaagaaatgagacttcagcggcacggtatgatacaaactaag
gaacagtacctcttctgctacaaagtctggttggaggttttacagggaattttacagctt
caaggcaaccagtggcagccagaaagccctagggatcacaaagtagtttga
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integrated database retrieval system
