Oryzias melastigma (Indian medaka): 112161491
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Entry
112161491 CDS
T07439
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112161491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112161491
03036 Chromosome and associated proteins [BR:
oml03036
]
112161491
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112161491
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
112161491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
DUF1543
Motif
Other DBs
NCBI-GeneID:
112161491
NCBI-ProteinID:
XP_024152409
Ensembl:
ENSOMEG00000004338
LinkDB
All DBs
Position
LG15:complement(21392608..21406728)
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AA seq
1184 aa
AA seq
DB search
MADQVAAMCDQLTKAVLVMMDAETSQVYRLEALKFCEDFKESSSLCIPCALQLADKTKPA
VVRHFGLQTLEHVIKFRWNNMPQEEKVQIKECAMQLLSRGTHSILEEESHVKDALSRIIV
EMIKREWPQHWPDMLKEMESLTSQGDVQTEVVMWILLRLAEDVITFQTLPNQRRRDIQQT
LTQNMDNIFSFLLAVLHIHVDSYHKVKGLPGHELKVRAHCRVAVATLNTLAGYIDWVSLT
HITSGNGHLLEMLCLLLSEPELQLEASECLLIALNRKGKLEEREPFMLLFDDVAIQCILS
AAQSADGPSTSMNSSESLAGEVVERRYVFLKRLCQVLCALGVQLCSLVGSDVNVEVPANL
SKYTEALLAFTTHPSQFLKSCTLATWGALFKHEVLSKEAVVVQMAVNYLKVSMTNFVKTG
FPSQNDNPSSDYSRMDFHSDEDFHFFFYSFRGQQGDVLKIVSRIVPLEAFQTAADWLHYQ
IACPIDPGQSASKSSRGLCSPKSPSVVQWDAMTVFMECVVWQILKTLPEEKLPIDQSMEL
LQAVLNYDTKDPLILSCLLTTVSVLLPFLVHRQQLVPQVLFKLFKTLTFEFDQENKVPRT
KSVKNVRRHACSSIIRICRDYPQFILPSFDMFYSNVKKLLSSDALQTCLERASLVEALVL
ISNKFQDFEKQKAFLDELLAPVLAEWTSEEMRSVLWDPVKFLSFVGADQVVAEQEAVTNV
ASLKRAQLSFCLSAMLSVVKRARWPADVEEAKSGGFVVGHDLNGAPIYRNPCSAQFLAFM
PNLLALIRTQNSLFMPENIARLSETLVRAYDLMDMEKNIVIGLPQLPQDVYDSPVYRSNL
ERMQGFLGTLYDNCFTLLGSAGASLQKEFYTIDGLAELIAGSAFVSLDQVPDHRLRSIIR
LFMRPLVVSCPSEYSDSLLRPLLAPLFAYMMQRLSMKWQVISQRASVDGDDEEEQVACQK
SEVTQEMLEEQLVRLVTKEVLDLLNVSCVSKKVAEPAASKEENGDEDMMMDSVQPASVPE
GLTELGKCLMKHEDVCMLLLTLSFTSLSWKDTANCHRTASMVCWTLLKQVAAGNLLPEAV
TWFFTSVLRALQIHGQHDQCNLTLSQLAMVIYENLRPRYEELRGVMIQIPNINIQALDQF
DQKLMDPSGPKLTEKKKKDLFRKLIAGTVGKALCEQFRKEDQHR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggtggccgccatgtgcgatcagctcacaaaggctgtgctggtgatgatg
gacgcagaaacgagccaagtttaccggctagaggccctaaagttttgtgaagattttaaa
gagtcaagcagcctctgcatcccatgtgctctacaattagcggataaaaccaagccagct
gtagtgagacactttgggctgcaaacattggagcatgtcattaagttcaggtggaataac
atgccacaagaggagaaagtgcagataaaggagtgtgccatgcagcttttatccaggggt
acccattccatcctggaggaggagagccacgtgaaggatgctctgtcaagaatcatagtg
gaaatgatcaagagggagtggcctcaacactggcctgacatgctgaaagagatggagtcc
ctaaccagccagggggacgtgcagacagaggtggtgatgtggattctcctgaggcttgca
gaggatgtgatcaccttccagacgttgcccaaccagaggcgcagagacatccagcagacg
ctcacccaaaacatggacaacatcttcagtttcttgttggcggttttgcacatccacgta
gacagctatcacaaagtgaaaggtctgcctggtcatgaactgaaggtcagagctcactgt
cgagttgccgtggcgacgctgaacacacttgcaggctacatcgactgggtttcgttgacc
cacatcacctctggaaacggtcatctactggagatgctgtgtctgttgctgagtgagccg
gagctgcagcttgaggcttcagagtgtctactaatcgctttgaaccgaaagggcaaactg
gaggagagggagccatttatgctgctcttcgatgacgtggccattcagtgcatcctctcc
gcagctcagtcagctgatggaccgtcgacgtctatgaattcctctgaatccttagcaggg
gaggtggtggagcgccgttacgtcttcctgaagaggctctgtcaggtgctgtgcgctttg
ggagtccagctctgctcactggtggggtccgatgtaaacgttgaagtccctgcaaatctt
agcaagtacaccgaagctttattagccttcactacacatcccagtcagtttttaaaatcc
tgcactctggcaacatggggagctttattcaaacacgaggttctgtcaaaagaggctgtg
gttgtgcagatggctgtcaattacctcaaagtgtccatgactaactttgtcaagaccggg
tttccctcccaaaacgataatcccagctccgactactcccgcatggacttccacagcgat
gaggacttccactttttcttctactctttccgaggacagcagggagacgttttgaagatt
gtgagtcgcatcgtccctctggaggcgttccagactgcagcagactggttgcattaccag
attgcctgtccgattgatcccggacaatccgcctcgaagagctccaggggtttgtgctcc
cccaagtctccatcagtggtccagtgggatgcgatgactgttttcatggagtgtgtggtg
tggcagatcctcaaaactctcccagaagagaagttgcccatagatcagagcatggagctg
ctgcaggcggtgctgaactacgacaccaaagacccgctgatcctctcctgcctgctcacc
accgtctctgtcctccttcccttcctcgtccacagacaacagctggtgccccaagttctc
tttaagttatttaaaacattgacgtttgaatttgatcaggaaaataaggtacctcgaact
aaatctgtgaagaatgtgaggagacacgcctgctcctccatcatcaggatctgccgggat
tacccacagttcatcttgcccagctttgacatgttttacagtaacgtgaagaagctactg
tcaagtgatgccttacagacctgcttggagagggcctccctggtggaagccctggtgctc
atcagcaacaagtttcaagactttgaaaagcagaaggcgtttctagatgagctgctggct
cctgtccttgcagagtggacgtcagaggagatgaggagtgtgctctgggatccagtcaag
ttcttgtcttttgttggggctgatcaggtagtcgctgagcaagaggcagtaacaaatgtg
gcaagccttaaaagggcacagctgagtttctgcttgagcgccatgctgtcggtggttaag
cgagcgcgctggcctgcagatgtggaagaagccaagtctggggggtttgttgtgggtcac
gacctcaacggagcccccatctacagaaacccctgcagcgcacagttcctggcctttatg
cccaacctgctggcactaatcaggactcagaacagtctcttcatgccagagaatattgct
cgtctcagtgagactttagtcagagcctacgacttgatggacatggagaagaacatagtc
attggtctccctcagcttccacaggatgtgtatgactcgcccgtgtataggagcaacctg
gagcggatgcaggggtttctgggaacgttatacgacaactgcttcactttgctcggaagc
gcaggcgcatccctgcagaaggaattctacaccattgacgggctagctgaactaatcgcc
ggctctgctttcgtctcactcgatcaagtgcctgaccacagactccgttccataattcgt
ctgtttatgagaccacttgtggtttcatgcccttcagaatacagcgacagtctgctgcgc
cccctgctggcacctctgtttgcttacatgatgcagagactcagcatgaagtggcaagtc
atcagccagagagcatctgtcgatggtgatgatgaggaggagcaggtggcctgccagaag
agcgaggtgacgcaggagatgttggaggagcagctggtgcgcctggtcaccaaagaagtc
ctggatcttctcaacgtgagctgtgtctccaaaaaagtggctgaaccggcagcaagcaag
gaggaaaatggtgacgaagacatgatgatggattcagtgcagcccgcgtccgtcccagaa
ggcctgaccgagctggggaagtgcctcatgaaacacgaggacgtctgcatgttgctgctg
acgctgtccttcacttcactgtcatggaaggacaccgctaactgtcatcgcacggcttcc
atggtctgctggactcttctcaaacaggttgcagctggtaatctacttcctgaagcggtc
acatggttcttcaccagtgttcttagggcgcttcagattcacgggcagcatgaccagtgc
aacttaacgctctctcagcttgctatggtcatctatgaaaacctgcggccgcgctacgag
gagctgagaggagtgatgatccaaattccaaacatcaacattcaggctctggaccagttc
gatcaaaagctcatggaccccagcggtccgaaactcacagagaaaaagaagaaagacctg
ttcaggaagctcattgcaggaaccgttgggaaagctctgtgtgagcagttcaggaaggag
gaccagcatcgatga
DBGET
integrated database retrieval system