Oryzias melastigma (Indian medaka): 112161540
Help
Entry
112161540 CDS
T07439
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a
KO
K03231
elongation factor 1-alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112161540 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112161540 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
oml03016
]
112161540 (eef1a1a)
03012 Translation factors [BR:
oml03012
]
112161540 (eef1a1a)
04131 Membrane trafficking [BR:
oml04131
]
112161540 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112161540 (eef1a1a)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112161540 (eef1a1a)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112161540 (eef1a1a)
Translation factors [BR:
oml03012
]
Eukaryotic type
Elongation factors
112161540 (eef1a1a)
Membrane trafficking [BR:
oml04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112161540 (eef1a1a)
Exosome [BR:
oml04147
]
Exosomal proteins
Proteins found in most exosomes
112161540 (eef1a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112161540
NCBI-ProteinID:
XP_024152509
Ensembl:
ENSOMEG00000023456
LinkDB
All DBs
Position
LG15:14736219..14742106
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMTWFKGWKINRKEGNASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALT
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKVSTTGKVTKSAQKAQRNK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaaactccacatcaacatagtcgtgatcggacatgtcgactccggcaaa
tcaaccaccacaggccacctcatctacaagtgtggcggcatcgacaagagaaccatcgag
aagtttgagaaggaagcagctgagatggggaaagggtcattcaagtacgcctgggtgttg
gacaaactaaaggcagagagggagcgcggcatcaccatcgacatctctctgtggaagttt
gagaccagcaagtattacgtgaccatcatcgatgcgccgggccacagggacttcatcaag
aacatgatcaccgggacctcccaggctgattgtgctgtcttgatcgtggcggctggcgtc
ggtgagttcgaggctggcatttccaagaacggacagacccgcgaacatgccctgctggct
tacactcttggggtgaagcagctcattgtgggcgtcaacaagatggactccacggagcca
aactacagccagaagcgctacgaagagattgtgaaggaagtgagcacctacatcaagaag
atcggctacaatcccgacaccgttgcctttgtgcccatttctggctggaatggagacaac
atgcttgagcccagtcccaatatgacctggtttaaaggatggaagatcaataggaaggaa
ggtaacgcatcaggcaccacactgctggaagctctggatgccatccagccgccgactcgt
ccaacagacaaacccctacgtcttcccctgcaggatgtctacaaaatcggaggtattgga
acagtccctgtaggtcgtgtggaaacggggatactaaaacctggcatggtggtgaccttt
gcccccgtcaatgtgaccactgaggtgaaatctgtggagatgcatcacgaggctctaact
gaggctcttcctggagacaatgtgggcttcaatgtcaagaacgtgtctgtgaaggatatc
cgccgtgggaatgtggctggcgacagcaagaatgaccccccgcaggaagctgccaacttc
actgctcaggtgattattctcaaccacccaggccagattagtgcaggttacgctcctgtg
ctggactgccacactgctcacattgcctgcaagtttgcagagctgaaagaaaagattgat
cgtcgctcagggaagaagctcgaggacaaccccaagtctctgaagtcaggagatgccgct
attgtagacatgattccagggaagcccatgtgtgttgagagcttttccgagtaccctcca
ctgggtcgctttgcagttcgcgatatgcgccagaccgttgctgttggcgtgatcaagggg
gtggagaagaaagtctccaccactggtaaggtcaccaagtctgctcagaaggcccagagg
aacaaatga
DBGET
integrated database retrieval system