Oryzias melastigma (Indian medaka): 112161577
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Entry
112161577 CDS
T07439
Name
(RefSeq) transcription factor COE3 isoform X1
KO
K09103
early B-cell factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112161577
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112161577
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
112161577
NCBI-ProteinID:
XP_024152571
Ensembl:
ENSOMEG00000007721
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All DBs
Position
LG15:complement(6690108..6759560)
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AA seq
574 aa
AA seq
DB search
MFGIQETIPRGGTTMKEEPLGGLNSVRSWMHTAGVVDANTAAQSGVGLARAHYEKQPPSN
LRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPTSEKTNNGIHYKLQLLYSNGVR
TEQDLYIRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPV
IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHG
RRARRLDPSEAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPH
AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPG
DPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPSLANTA
SHGMMGVNSFSSQLAVNVSESQGNDQVGYSRNTSSVSPRGYISSSTPQQSSYNTVSNSMN
GYGNAGMNLGVPSSPGFLNGSSANSPYGIKQKSAFAPVVRPQASPPPSCTSANGNGLQGE
PPSPPHPFPTDYWSDTAAQASVRFAMSGLVVPPM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaactataccgcgaggtgggacgacgatgaaggaggaaccgctg
ggtggactgaactcggtccgctcctggatgcacacagctggggtggtggatgcaaacaca
gccgcccaaagcggtgtcggcttggcacgggcacattatgaaaagcagcccccttccaac
ctcagaaaatccaattttttccatttcgtcctggcgctgtatgacaggcagggtcagccc
gtggagatcgaaaggacagcttttgtggactttgtggagaaagaaaaagaaccaaccagt
gaaaaaactaacaatgggatacattacaaactacagttattgtacagcaacggtgtcaga
acagaacaggatctttacatacggttaatcgattccatgacgaagcaggccatagtttat
gagggtcaagacaagaatccagaaatgtgcagagttcttcttactcatgaaataatgtgc
agccgatgctgcgacaagaaaagctgtgggaacaggaacgagactccgtcagacccagtg
atcatcgacaggttcttcctaaagttcttcctcaagtgcaatcagaactgtctgaagaat
gcgggcaacccacgagacatgcgcagatttcaggttgtcgtatcgacgaccgtcaatgtg
gacggccatgtcttggctgtctctgacaacatgttcgtacacaacaattccaagcatggg
cgaagggctcgcagactcgacccttcagaagcagccaccccatgcatcaaggctatcagc
cccagcgagggatggaccactggaggagctactgtcatcatcatcggagacaacttcttt
gatggcctacaagtcgtctttggcaccatgcttgtatggagcgagctgataactccccac
gccatccgggtccagactccacctcggcatattcctggcgttgtggaagtcacgctgtcc
tacaagtccaagcagttctgcaaaggtgctcctgggagatttgtctatactgccctgaat
gagccaaccattgactatggtttccagaggctgcagaaggtcatccccagacaccccggc
gaccccgagaggttaccaaaggaggtgttactgaagagggcggctgatcttgttgaagcc
ctgtatggaatgcctcacaacaatcaggagatcatactgaagagggcggccgacatcgcc
gaggccctgtacagtgttccacgcaaccacaaccagatcccctctctcgctaacacagcc
tcccacggcatgatgggagtcaactccttcagcagccaactagcagtcaatgtgtctgag
tcacaagggaacgaccaagtgggctacagccggaacaccagcagcgtgtcccctcggggc
tacatctccagcagtaccccacagcagtcaagctacaacaccgtcagcaacagcatgaat
ggctacggcaacgccggcatgaacctgggagtgccaagctcccctgggttcctcaacgga
tcctctgccaactccccatatggaattaaacaaaagagcgccttcgcccctgtggtccga
ccccaggcctccccacccccttcctgcaccagcgccaacggcaacggactgcaaggtgag
cccccctcaccccctcatcccttccctacggactactggtcagataccgctgctcaggcc
tctgtccggtttgccatgtccggcctggttgtcccaccaatgtaa
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