KEGG   Oryzias melastigma (Indian medaka): 112161580
Entry
112161580         CDS       T07439                                 
Symbol
snx5
Name
(RefSeq) sorting nexin-5
  KO
K17920  sorting nexin-5/6/32
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112161580 (snx5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112161580 (snx5)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:oml04990]
    112161580 (snx5)
Membrane trafficking [BR:oml04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    112161580 (snx5)
Domain-containing proteins not elsewhere classified [BR:oml04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   112161580 (snx5)
SSDB
Motif
Pfam: Vps5 PX LcrG DASH_Dad3
Other DBs
NCBI-GeneID: 112161580
NCBI-ProteinID: XP_024152579
Ensembl: ENSOMEG00000021241
UniProt: A0A3B3DWK3
LinkDB
Position
LG15:complement(26261351..26267483)
AA seq 398 aa
MSSFDDNNKERLRSVSVDLNNDASLLIDIPDALCERDKVKFTVHTKTTLSSFQKPEFSVP
RQHEDFIWLHDTLVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYTKMKQ
ELEAEYLAVFKKTVQVHEVFLQRLSSHPILSKDRNFQIFLEYDQDLSVRRKNAKEMFGGF
FKNMVKSADEVLIAGVKEVDDFFEQEKTFLLDYFSKIKDATAKAEKMTRSHKNIADDYIR
LSATLNSLSAEESTANKKTLDHISDLFEKLRKVEGRVASDEELKLTELLRYYMRDIQAAK
DLLYRRARALADYENSNKALDKARLKGKDVSQAEEHQQRCLQKFDNLSESGKKELTNFKA
RRVVAFRKNLVEMAELEVKHAKNNMTLLQGCIELLSSN
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgtcctcgtttgacgataacaacaaagaaaggctgcgttctgtgtctgtggatttaaac
aatgatgcatctcttctcatcgacatccccgacgcgctctgtgaaagggataaagtcaag
ttcacggtccacacaaagaccacactaagctcattccagaagccagagttctctgttccc
aggcagcatgaagacttcatctggttacacgacactttggttgaaactgaggactacgct
ggtctaataatacccccagcccccccaaagcctgactttgagagccccagagagaagatg
cacaaacttggggaaggtgaagccactatgacaaaagaggaatacactaaaatgaagcag
gagctggaggctgaatacctggctgtcttcaagaaaaccgttcaagttcatgaagtcttc
ctgcaaagactgtcgtctcatcccattttaagcaaagacagaaactttcagatttttctg
gagtatgaccaggatctgagtgtcaggagaaagaatgccaaggagatgtttggagggttc
tttaaaaacatggttaagtctgcagacgaggtcctcatcgctggagtaaaggaagtggat
gacttttttgagcaggagaagacgtttttgctcgactacttcagcaagataaaagatgcc
actgccaaggcggagaaaatgacacgctctcacaaaaatattgcagatgattacattcgc
ctttctgccactttaaacagcctgtctgccgaagagagcacagcaaacaagaaaaccttg
gaccatatctccgatctgtttgagaagctcagaaaagtggaagggagagtggcatcagat
gaggagctgaaactcacagagttactgagatattacatgagggacatccaagctgcaaag
gaccttctgtaccggagagcccgagctttggccgactacgagaactccaacaaggcgttg
gacaaagctcggctcaaaggcaaggacgtttctcaggcagaggagcaccagcagcgctgc
ctgcagaaatttgacaatctctcagagtctggaaagaaagaactcactaatttcaaggcc
agacgtgttgttgccttcaggaagaacctggtcgaaatggctgagcttgaagtaaaacac
gccaagaacaacatgactcttttgcaaggatgcattgagctgctcagcagtaactga

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