Oryzias melastigma (Indian medaka): 112161580
Help
Entry
112161580 CDS
T07439
Symbol
snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112161580 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112161580 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112161580 (snx5)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Macropinocytosis
Sorting nexins
112161580 (snx5)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112161580 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
LcrG
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
112161580
NCBI-ProteinID:
XP_024152579
Ensembl:
ENSOMEG00000021241
UniProt:
A0A3B3DWK3
LinkDB
All DBs
Position
LG15:complement(26261351..26267483)
Genome browser
AA seq
398 aa
AA seq
DB search
MSSFDDNNKERLRSVSVDLNNDASLLIDIPDALCERDKVKFTVHTKTTLSSFQKPEFSVP
RQHEDFIWLHDTLVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYTKMKQ
ELEAEYLAVFKKTVQVHEVFLQRLSSHPILSKDRNFQIFLEYDQDLSVRRKNAKEMFGGF
FKNMVKSADEVLIAGVKEVDDFFEQEKTFLLDYFSKIKDATAKAEKMTRSHKNIADDYIR
LSATLNSLSAEESTANKKTLDHISDLFEKLRKVEGRVASDEELKLTELLRYYMRDIQAAK
DLLYRRARALADYENSNKALDKARLKGKDVSQAEEHQQRCLQKFDNLSESGKKELTNFKA
RRVVAFRKNLVEMAELEVKHAKNNMTLLQGCIELLSSN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtttgacgataacaacaaagaaaggctgcgttctgtgtctgtggatttaaac
aatgatgcatctcttctcatcgacatccccgacgcgctctgtgaaagggataaagtcaag
ttcacggtccacacaaagaccacactaagctcattccagaagccagagttctctgttccc
aggcagcatgaagacttcatctggttacacgacactttggttgaaactgaggactacgct
ggtctaataatacccccagcccccccaaagcctgactttgagagccccagagagaagatg
cacaaacttggggaaggtgaagccactatgacaaaagaggaatacactaaaatgaagcag
gagctggaggctgaatacctggctgtcttcaagaaaaccgttcaagttcatgaagtcttc
ctgcaaagactgtcgtctcatcccattttaagcaaagacagaaactttcagatttttctg
gagtatgaccaggatctgagtgtcaggagaaagaatgccaaggagatgtttggagggttc
tttaaaaacatggttaagtctgcagacgaggtcctcatcgctggagtaaaggaagtggat
gacttttttgagcaggagaagacgtttttgctcgactacttcagcaagataaaagatgcc
actgccaaggcggagaaaatgacacgctctcacaaaaatattgcagatgattacattcgc
ctttctgccactttaaacagcctgtctgccgaagagagcacagcaaacaagaaaaccttg
gaccatatctccgatctgtttgagaagctcagaaaagtggaagggagagtggcatcagat
gaggagctgaaactcacagagttactgagatattacatgagggacatccaagctgcaaag
gaccttctgtaccggagagcccgagctttggccgactacgagaactccaacaaggcgttg
gacaaagctcggctcaaaggcaaggacgtttctcaggcagaggagcaccagcagcgctgc
ctgcagaaatttgacaatctctcagagtctggaaagaaagaactcactaatttcaaggcc
agacgtgttgttgccttcaggaagaacctggtcgaaatggctgagcttgaagtaaaacac
gccaagaacaacatgactcttttgcaaggatgcattgagctgctcagcagtaactga
DBGET
integrated database retrieval system