KEGG   Oryzias melastigma (Indian medaka): 112161588
Entry
112161588         CDS       T07439                                 
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112161588 (tial1)
   03041 Spliceosome [BR:oml03041]
    112161588 (tial1)
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     112161588 (tial1)
Spliceosome [BR:oml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    112161588 (tial1)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Nup35_RRM_2 Calcipressin RRM_Nup35 XOO_2897-deam Toxin-deaminase
Other DBs
NCBI-GeneID: 112161588
NCBI-ProteinID: XP_024152591
Ensembl: ENSOMEG00000016815
LinkDB
Position
LG15:complement(29076965..29086957)
AA seq 379 aa
MDDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA
AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVKAAFTPFG
KISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPK
SLQDNVSKQLRFEEVVTQSSPQNCTVYCGGIQSGLSEHLMRQTFSPFGQIMEIRVFPEKG
YSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTDVAKNPQQFEYNQWGQWNQVYG
NPQQQQQQQQYGQYVTDGWQVPSYNMYGQSWSQQGFGTEQSQSSAWMGSFGSSSAQGAAP
PGSGLPNMGNFSMAGYQSQ
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggacgacgaaagccaccccagaacactgtatgttggaaacctttctagagacgttacc
gaaattttgatcctgcagctcttcacccagatcggaccatgcaaaagctgcaaaatgatc
acagagcacactagcaatgatccctactgctttgtggagtttttcgaacacagagatgct
gcagcggctctggcagccatgaacgggaggaagatactgggaaaggaagtcaaagtaaac
tgggccaccaccccaagtagccagaaaaaagacacttccaatcacttccatgtttttgtg
ggtgatttgaaccctgacatttccacagaagatgttaaggctgctttcacaccatttggg
aaaatctcagacgctcgtgttgtgaaggacttgacgaccggaaagtcaaaggggtatgga
tttgtgtccttctacaacaaactggatgcagaaaacgccatcgttcacatggcgggtcag
tggcttggaggacgccagatcagaaccaactgggccacgcgtaaacctccggcccctaaa
agccttcaagacaatgtttcaaagcagctgaggtttgaagaggtggtgacccagtccagc
ccccagaactgcaccgtctactgtggggggatccagtcaggactatcagaacatctgatg
agacagacgttctcaccgttcggtcaaataatggaaatcagggttttcccagaaaaaggg
tattctttcatcaggttttcctcccatgacagtgcggcccacgccatcgtttcagtgaac
ggaacatccatcgagggacacgcagtcaaatgctactgggggaaggagtccacagacgtg
gcaaagaaccctcagcagtttgagtacaaccagtggggtcagtggaaccaggtgtacggg
aacccgcagcagcagcagcaacagcagcagtatgggcagtatgtgaccgatggctggcag
gttccctcttacaacatgtacggccagagctggagccagcaaggcttcggaactgagcaa
tcgcagtcttcagcctggatggggagttttggatcttcttcagcccagggagctgctcct
cctggctccgggttgcccaacatggggaacttcagcatggctgggtatcagtcgcaataa

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