Oryzias melastigma (Indian medaka): 112161657
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Entry
112161657 CDS
T07439
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112161657 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112161657 (gbf1)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112161657 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
CYTL1
Motif
Other DBs
NCBI-GeneID:
112161657
NCBI-ProteinID:
XP_024152753
LinkDB
All DBs
Position
LG15:complement(9218943..9310729)
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AA seq
1861 aa
AA seq
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MVDKNIYIVQGEITTVVGAIKRNSRWNTHTSLDEEQDPLLNSFGQLKEILNNIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSYVGANMKKLKMRAGGMSESSKWKKQKRSPRPPRHM
VRSASGGMDHSQPSTLSNNLTGGVPFIDQGSGSGLPASDSAGSSISSPTDSGLDTCSKAT
SRDDLSDLDQCSSSVNTPCSAASPPGSESGSHDAPLEGKLAEPAPSASVESIPEVLEDKE
SDNTSVHDMDYVNPRGVRFTQSTQRDGVSLIPYGLPCLRELFRFLISLTNPHDRHNTDAM
MHMGLQLLTVALESANIANYQSLLILVKEELSRHLFQLLSVERMNLYAASIRVCFLLFES
MRVHLKFQLEMYLKKLMDIITSENIKMPYEMKEMALEALVQLWRIPSFVTELFINYDCDF
YCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSIEAHCQAKVPDAVAQQDQS
DTLLAEGEASSTNGTDSTTELTQLGNTNVNHAPADSSPVCPPTSGHLMAERMRLGRQDQG
AAEAEKRTPKKPQRFSSYLPDSQELLEIRTKKKLLITGTEQFNQKPKKGIQFLQEKGLLS
DPLDNNQVAQWLKENPRLDKKMIGEYISDRKNLELLDSFVNTFTFQGLRIDEALRLYLEA
FRLPGEAPVIQRLLETFTDNWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNHNVRKQNIP
MTVEQFKKNLKGVNGNKDFDQDMLEDIYNAIKNEEIVMPDEQTGLVKENYVWSVLLHRGA
ASEGVFLHLPPSSYDHDLFTMTWGPTIAALSYVFDKSLDDSIIQKAISGFRKCAVIAAHY
GFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNSKAQTAAKTVFDLSHRHGNILREGWK
NIMESMLQLFRAELLPKAMVEVEDFVEPNGKISLQREETPSNRGESAVLSFVNWLTLSGA
EQSGLRGPSTENQEAKQAAILCIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETY
DEEDAAFCLEMLLRIVLENRDRVSCVWQTVRDHLYHLCVHATESCFLVERAVVGLLRLAI
RLLRREDISSQVLLSLRLLLMMKPHVLSRVSREVSFGLHELLKTNAANIHCTDDWYTLFS
LLECIGAGVKPPASFQLASTTADSDAGAQSDSELSSYHASEVSSDRGYTSDSEVYTEHSK
ARMPRSTTDVDVASSGWLVVGKDDLEINKTPQVNSKAQLNHPLVNQYSLTLGQDLGQHDT
KSLVKCVETLSFIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNHDKKKSHKYDSSKS
RMRKKAGGKEKDGGAGLRRGGGGRASGQRLSRSHSDDEEDEGVPASYHTVSLQVSQDLLD
LMHTLHTRAANIYSSWAEEQRHLETAGKKIEADSQTLWTSCWCPLLQGIAWLCCDARRQV
RMQALTYLQRALLVHDLQTLDATEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMRAC
TLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDT
AGIFHSTDSRTGYSDLWEITWERIVCFLPNLREELFKQTVIQDPTPAPPAEASTPAPQRP
SSPQAPQTQQPSPVPAGQAETPSSLESPQKPKPLSTNGSDQSPPTPPAIPATPPPLTTPP
IPAPSPLSQSPLILQPLASPLQVGVPPMSLPIILNPALIEATSPVPLLSGVKPATSTDEV
K
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaacatctacattgtccaaggtgaaattaccactgttgttggagcgata
aagagaaactccagatggaatactcatacatcactggatgaggaacaggatccattactg
aacagctttggacagctcaaggaaatactcaataacattaaagaactctcagatgttgaa
cccaacgttttcctgagaccttttctggaagtcgttcgctccgaggacaccactggacca
atcacaggcctcgctcttacctcagtcaacaagttcctctcctatggccttattgatgca
aaccacgaggcagcagcagaggccattgagaacatggcggacgcagtcacacacgctcgg
tttgtgggaaccgatcctgccagcgacgaggtcgttctcatgaagattctgcaggtgttg
aggacgctgctgctgacgccagttggagcccacctgaccaatgagtccgtctgtgaaatt
atgcagtcctgctttagaatctgcttcgagatgcgtctgagcgagcttctcaggaagtcg
gctgaacacactctggttgacatggtacagctgctgttttccagactgccccagttcaaa
gaagaggccaagagttacgtgggtgccaacatgaaaaagttgaaaatgcgtgctggtggg
atgagcgaatcttccaaatggaagaagcaaaagcgctcaccaaggcctcctcgccacatg
gtacgaagtgcctcaggtgggatggaccacagtcagcccagcaccctcagcaacaacctc
actggtggtgttccattcatcgaccaaggctccggttctggactcccagcctcagacagc
gccggctcctccatatccagccccacagacagcggcctggatacctgttccaaagccacg
tctagagatgacctttctgacctggaccagtgtagctcctctgtgaacaccccctgttct
gctgcttcaccccctggctctgagtctggctcacacgatgcaccgcttgagggaaagctg
gctgagccagctccgtcagcctcagtggagtccattccagaagttctcgaggataaagaa
tctgacaacacctctgtgcatgacatggactacgtcaatcctcgtggagtccggtttaca
cagtccacccaacgagatggtgtatccctcattccttacggcttgccatgtctaagggaa
ctcttccgcttcctgatctccttgaccaaccctcatgaccgacacaacaccgatgccatg
atgcacatgggccttcagctgctgactgtcgcactcgaatcagcaaacatcgctaactac
cagtctttgctcatcttggtcaaagaagagctatctagacacctatttcagttgctgagt
gtggagcgcatgaacctctatgctgcttccatacgagtgtgcttcctgctctttgagagc
atgagagtccatctaaagtttcagctggagatgtacctgaagaaactgatggacatcatc
acatcagagaacattaagatgccctacgagatgaaggagatggctctggaggcgctggtc
cagctgtggagaatccccagcttcgtcactgagctgttcatcaactacgactgcgacttc
tactgctccaatctctttgaagacctcaccaagctgctgtccaagaatgcgttcccagtg
tcggggcagctgtacactacccacctgctgtcactggaggccctgctgacggtcattgat
agtattgaagcccactgccaagccaaggtccccgacgccgtggcgcagcaagaccagtcg
gacacgctgctggctgaaggtgaagcctccagcacaaatggtacagactctaccactgaa
ctaactcagcttggcaacactaatgtaaaccatgcaccagctgacagttcaccagtatgc
ccgcccaccagtggacatttgatggcggagcggatgagattaggccgacaggaccaagga
gccgctgaagctgagaagagaactccgaaaaagccccagcgtttctcctcatacctaccc
gactctcaagagttgctggagattagaacgaagaaaaagctgctgatcacaggtactgag
cagtttaaccagaagcccaagaagggaatccagttcctccaggagaaaggactcctcagt
gaccccctggacaacaaccaggtggcccagtggttgaaggaaaacccccgccttgacaag
aaaatgatcggcgagtacatcagtgatcgcaagaacttggagctcttggacagctttgtg
aatactttcaccttccaggggcttcggatcgacgaggctctgcggctttacctggaggcc
ttcagactacccggagaggctcctgtcattcagaggctgctggaaaccttcacagacaac
tggcataaagtgaacggctctccattcatgaccaacgacgccggctttgccctggcctac
gccgtcatcatgctaaacactgaccagcataaccacaacgtccggaaacagaacattccc
atgacggtggagcaatttaagaaaaacctgaagggcgtcaacggaaacaaagactttgac
caggacatgctggaagatatctacaacgccatcaagaatgaggagatcgtgatgccagat
gaacagacgggcttagtgaaggagaactatgtctggagcgtgctgctgcatcgcggagcg
gcttcggagggcgttttcctccatcttccacccagcagctacgaccacgacctgttcacc
atgacgtgggggcccaccatcgctgcactctcctacgtgtttgacaagagcctggatgac
agcatcatccagaaggccatcagtggcttcagaaaatgtgctgtgatcgctgctcattat
ggcttcagtgacgtgtttgacaacctgatcatctccctctgcaaattcaccactctgagc
agtgagtcggtggaaaacctcccgacagtgtttggcagcaacagcaaggctcagacggca
gccaaaactgtgtttgacctgtcccatcggcacggcaacatcctgagagagggctggaag
aacatcatggagtccatgctgcagctgttccgggcagagctgctgcccaaagccatggtt
gaggtggaggatttcgtggagccaaacgggaaaatttctcttcagagggaggaaacccct
tcaaatcgcggtgagtctgccgttttgagttttgtcaactggctgactctgagtggagcc
gagcagtctggactccgaggaccgtcaacggaaaaccaggaagcaaagcaggccgccatc
ctctgcatcaagcaatgtgacccagagaagttgatcacggagagcaagttcctccagctg
gagtctctgcaggagctgatgaaggcgctgatatcggtcaccccagatgaggagacgtat
gatgaagaggatgctgccttctgcctggagatgctgctgcgcatcgtcctggagaacagg
gaccgcgtgtcctgcgtttggcagacggtccgagaccacctctaccacctgtgcgttcac
gccacggagagctgcttcctggtggagcgggccgtggtgggcctgctgagactcgccatc
cgccttctgcgccgagaagacatcagctcgcaggttctcctctctctgcgcctcctcctc
atgatgaagccccatgtgctgtcccgggtcagcagggaggtttcctttggccttcacgag
ctcctgaagactaatgccgccaacatccactgcacggacgactggtacactctcttctct
ctgctggagtgcatcggtgctggagtcaagcctccggcctcgttccagctcgcctccacc
accgccgacagcgacgcaggcgctcagtccgacagtgaactctcatcgtaccacgccagt
gaagtgagctccgaccgtggatacacgtctgactctgaggtctacaccgagcacagcaag
gccaggatgccgcgctccaccacagacgtggatgtagcgagtagcggatggctggtggtg
ggtaaggatgatctggagataaataagaccccccaggtgaactccaaagctcagctgaat
caccctctagtcaaccagtacagcctgactctgggtcaggacctgggccagcacgacacc
aagtctctggtcaagtgtgtggagactctgtccttcatcgtgcgggacgcggcccacgtc
acacccgacaactttgagctgtgtgtgcgagccatccgagtgttcgtggaggccagcctg
aacggaggctaccgcaatcatgacaagaagaagagccacaagtacgactcctcaaagtcc
cggatgaggaagaaggccggggggaaggagaaggacggtggagccgggttgaggcggggc
ggcggcggcagagcatccggtcagcggctttcccgttcccacagtgatgatgaggaggat
gaaggagtccctgccagctatcacactgtgtcattacaggttagtcaagacctgttggac
ctgatgcacacgctgcacacccgggcagccaacatctacagctcctgggcagaggaacag
cgccacctagagaccgcaggcaagaagatcgaggctgattcacagactctgtggaccagc
tgctggtgcccgctgctgcagggcattgcttggctctgctgtgatgccaggcgacaggtg
cgcatgcaggcgctcacctacctccagagggcgctgctggtgcacgacctgcagaccctg
gatgctacagagtgggagtcctgcttcaacaaggtgctgttccctctgctcaccaaactg
ctggataacatcagcccagcagacgtaggaggcatggaggagaccagaatgagggcctgc
acgctgctgtcaaaggttttcctgcagcacctctctcctctgctgtcgctgcccaccttc
gctgctctctggctcaccatcctggacttcatggacaagtacatgcatgcaggctccagc
gacctgctgctggaggccatacccgagtctttgaagaacatgctgctggtgatggacaca
gccggcatcttccacagcaccgactccaggacgggctactccgacctgtgggagatcacc
tgggaaaggatcgtctgtttcctgcctaacctgagggaggagctcttcaaacagaccgtc
attcaggaccccacccccgcaccacctgctgaggcatccacccccgcaccacagaggcct
tcatccccccaggcgcctcaaacccaacaaccctctcctgttccagcaggccaagctgag
acacccagcagtctagagtctccacagaagcccaagccgctcagcaccaacggttcagac
cagtctcctcccactccaccggccattcctgccactcccccaccattaaccacgcccccc
attccagcgccgtcccctctgagccagtcccccctcatcctgcagcccctcgcctcccct
ctacaggtgggggttcctcccatgtccctccccatcattctgaaccccgccctcatcgag
gccacctcccccgtaccgctgctgtccggagtcaaacccgccacctctaccgatgaagtc
aagtaa
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