Oryzias melastigma (Indian medaka): 112161663
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Entry
112161663 CDS
T07439
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03460
Fanconi anemia pathway
oml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112161663 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
112161663 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112161663 (fancl)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112161663 (fancl)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112161663 (fancl)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112161663 (fancl)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
112161663 (fancl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d1
FANCL_d2
FANCL_C
zf-RING_2
SLX1_C
DUF2286
FhbB
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
112161663
NCBI-ProteinID:
XP_024152764
Ensembl:
ENSOMEG00000001252
UniProt:
A0A3B3B448
LinkDB
All DBs
Position
LG15:complement(12496542..12531163)
Genome browser
AA seq
378 aa
AA seq
DB search
MSMSFTEDSLCRDNPLLLPVNEQKTVYDGFITVQDKDLRIKIILPPDLQLKKAKLHCCWQ
LKHLLRGYEAIVKQRLQQSADLSSFILELKTILEVGLKSRPECRSIPPPQYYSQIISEME
TLGWDKMVYIDMEFQTLKLKAEDSSGRQHMFTVRLKAKHPAEAPECSADLPVPLSVTWTP
QSTLEQLYSQFLLVLDSLTEFWDVLDEIDEKTWILEPENPSRSDTMRRIAIGNNVSIKVE
VDPRHPKMLPECCLLGAEHAVTPLRNKLNANMHLWNPDSSVLHNLRDVLEIEFPSPATHE
KSSFSVECGICYSYRLESAIPDQVCNDPRCGQPFHQACLYEWLRALPTCRQSFSIIFGEC
PYCSKPITVKMPSEVQKL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcgtttacggaggactcgctgtgtagagacaacccgcttcttctgcctgta
aacgagcagaagactgtttatgatggattcatcactgtccaggacaaagatctacgaatc
aaaataattctgccaccagatttacagctgaagaaagctaaactgcactgctgttggcag
ctgaaacatctgttgcgtggatacgaggccattgtgaagcagcgtctccagcagtcggct
gatctttccagcttcattctagagttgaagactattctggaagtgggtctgaagagccgt
cctgagtgccgctccatcccgcctcctcagtattactctcagataatctctgagatggag
acccttgggtgggacaagatggtctacatagacatggagttccaaacactgaaactgaag
gcagaggactcttctgggaggcagcacatgttcaccgtcagactcaaggcaaagcatcct
gcagaggctcccgaatgctctgctgacctgccagtcccactgtccgtcacctggacccca
cagagtactctggagcagctttatagccagttccttctggttctggactctctaaccgag
ttctgggatgtcctggatgagattgatgagaagacctggatcctggaaccggaaaacccc
agccgctcagatacaatgaggcggattgccatcggaaacaacgtatccatcaaggtggag
gtggatcctagacaccccaagatgctgccagagtgctgcctgcttggagctgagcatgcg
gtgacacctctgaggaataagctgaatgccaacatgcacctgtggaacccggactccagc
gtcttgcacaacctccgggatgttttggagatcgaattcccgtcacctgccacccacgaa
aaatctagcttcagcgtggagtgtggcatctgttactcctatcgccttgaatctgccatc
cccgatcaagtgtgcaatgacccccgctgtgggcagcccttccatcaggcctgtctgtat
gagtggctgcgagcgctccccacctgcagacagagcttcagcatcatttttggagagtgc
ccttactgcagcaagcccatcactgtgaaaatgcccagtgaagtccagaagttgtga
DBGET
integrated database retrieval system
