Oryzias melastigma (Indian medaka): 112161664
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Entry
112161664 CDS
T07439
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oml03029
]
112161664 (lrpprc)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
112161664 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_long
PPR_1
PPR_3
TPR_24
CHDCT2
Motif
Other DBs
NCBI-GeneID:
112161664
NCBI-ProteinID:
XP_024152765
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Position
LG15:2778672..2861076
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AA seq
1416 aa
AA seq
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MAALLRSARLLKISPSGFLQITGTKRNGALSRLYSGAVASRRTGVCSRQFKPVSDSFSWP
HSAVCVRSYAVATEQKDEASIAVKSKQAQQFDWALTKLESSVRRTGRVTKTQLLRIFHDI
CRTGYPSGNQALLLLRSCGSLLPEMPLAERSELAHRVWEKLQELGAQYDVSHYNALLKVY
LQNEFKFSPTDFLAKMEAANVLPNRVTYQRLIAAYCQNGDIEGASTILGFMKSKDLPITE
AVFSSLVTGHARAGDMESAKNILAVMRGAGIDPTPDTYVSLLNAYAEKGDVDGLKTTLEA
AESADCSLMDRDIMQVIFTLAKAGYQPLIPDMIERLRHERGYVPDAMNLCLSLITQGQED
TAFSILKTFPSLVSDNNESSNLGNFFLRHCVNVDTSLEKVAHYCKELQDLNLHSAPLTFV
LSCSLEAKKIGTSLELMRLLKEQNLPIRPHYFWPLLTQPVKENDVAGVLEVIKGMEKLGI
APDMETLSNYILPVFSDMETARQALKEAGVSVDSEGFLHSEVRAMAVHNLAKLYTTLSDP
SFPETDLSTFRSSLIVGFKKSSDVESMVKVTELLYKDERFSRGNSKPAEAVSYFLYNLFD
SMAEEQVHAQEEKLRTFLNKLHSQNITIPLNIYRGIKNLLESYHAPELVKDVVVLVDPKD
KAPTDFVSFGQRSAEGKVSSLEKKLSELKAENKPLGLVLKQLIQALCSEENLQRALELKQ
QHEEDMTAGSYATLINLCCRHNNVDEALNLKREMSRKDSSVALDANKYIALVKTLSVNDR
LEEAVDILKEMKEKEVVLNDANATTVFHVLNAVAAKDNIAAVRRLQDTIFSLGLTKPTAN
LCSPIVTAYLNRKDVAGALEATIECQKIYNHLPRIHDIIVALVEKGDTDLLQKAMDFISQ
ERGEMTMLYDLFFGFLQTGRYREARKIIETPGLRAKPGRLQWYADKCILNSQMENLEQMV
EMTAKLFECDRDDMYSYILRLCKETNDWRKAEAMWTKMQEENVIPRERTLRLLAEILKSN
DQEVPFDVPEMWYKRDAPTKTPPSPALPAAESGVDVNGRLLALCKKNKAKEAFEMLKDAE
KKGAEIGPTAFDHLIRTLLSQGFIEDAMVVKKMAEAQVPGFKLSDIASSLLIVSHCKKGQ
AKEGLERMKAMIQLDQIPFNLAITRLVQTLGSQGDVAGIQEVQSLVNSLGTNLNLSSMVF
VNNTALAHIKNGDVDAAVELLDGIYTAPNSTNPSMAFIFRKLLESGNDQALDKLSAMAER
LANHFACYRPASDLFLQLLDLDKVEDAKFMLARCNAVAQQKDILMSFLSQKAQSPGQIGK
IKNLLSLVPDFAEKRVVYAYLMKCHVLDKDLTSAKALYEQMLREGVTVDELSLKRLARLY
RETGETAPFPEPPESFKFYADKLKELAAKTQTTAEE
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgctcttgagatcagcccggttacttaagatttcgccttcgggtttcctccag
atcacagggaccaaaagaaatggagctctcagccgtctctacagcggagcggtcgctagc
aggagaacgggagtttgttcccgccagtttaagcccgtttcggacagtttctcctggcct
cattcagcagtgtgcgtgcgcagctacgctgtggccacagagcagaaggacgaagccagc
atcgcagtcaagtccaagcaagcccagcagttcgactgggccctgaccaaactggaaagc
tccgtgaggaggaccggtcgcgtcaccaagactcagctgctccgcatcttccatgacatc
tgcaggacaggttaccccagtggaaatcaggctctgctgctgctgcgcagctgtgggtct
ctgctgcctgagatgcctttggcggagcgctctgagctggcacaccgtgtgtgggagaag
ctacaggagctgggtgcacagtatgatgttagccactacaacgccttgctaaaggtttac
ctgcagaatgaattcaaattctctcccactgacttcctcgccaagatggaagcagcgaac
gtgctgccgaacagagttacctatcagagactgattgcagcctactgccaaaacggagat
attgagggagccagcaccatcctgggtttcatgaaaagcaaagatctccccatcactgaa
gcggtgttcagttctctggtgacggggcatgctcgcgccggtgacatggaaagtgcaaag
aacatcctggctgtgatgcggggagccgggatcgatcccacccccgacacttacgtgtcg
ctgctgaacgcgtatgctgagaagggagacgtggacggtttgaaaacgacgctggaggca
gcagagagcgcagactgcagtctgatggacagagacatcatgcaggtcatcttcactctg
gccaaagctggataccagccgctcattccagacatgatcgaacgtctacgacatgagaga
ggttatgtgccagatgccatgaacttgtgtctgagcctcatcactcagggccaggaggac
acagccttcagcatcctaaagacgttcccgtcactggtgtccgacaacaacgagtcctcc
aacctgggcaacttcttcctcagacactgcgtcaacgtggacacttcactggagaaggtc
gcccactactgcaaagagctgcaggacttgaatctgcattccgcgccgctcacatttgtc
ctgtcctgctccctggaagccaaaaagattggtacatctttagagctgatgaggctactt
aaggagcagaacttacccataaggcctcattacttctggcctcttctcactcagcctgtg
aaggagaacgatgtagcaggtgtgctggaggtgatcaaagggatggagaagctcggcatc
gcccccgatatggagactttatccaactacatcctcccggttttctccgacatggagacc
gctcgacaggctctcaaggaggcaggcgtgtctgtggactccgagggatttttgcactca
gaagttcgcgccatggctgtgcacaacctggccaagttgtacaccacgttgtcggacccc
tccttccccgagacggacctcagtactttccgcagcagcctcatcgtcggcttcaaaaag
tcatctgatgtggagagcatggtaaaggtcacagagttgctctacaaagatgagcgtttc
tccagagggaattccaaacctgctgaggccgtctcctacttcctgtacaatttgttcgac
agcatggcggaggagcaggtgcacgcgcaggaggagaaacttcgcactttcctcaataag
ctgcacagtcagaatatcacaattcccttaaacatctacagaggaataaagaatcttctg
gagtcctatcacgccccagaactcgtcaaggacgtggtcgttctggtggatcctaaagac
aaggcgcccaccgactttgtgtcgtttggtcaacgtagcgctgagggaaaggtgtcgtcg
cttgaaaaaaaattgtccgaactgaaagcggagaacaagccgttaggattggttctgaag
cagctcattcaggccctgtgttctgaggagaacctgcagcgcgccctggagctgaagcag
cagcacgaggaggacatgacagccggcagctacgccaccctcatcaacctgtgctgtcgc
cacaacaacgtggacgaggcgctcaacctgaagagggagatgagccgaaaggactcttca
gtagcgctggatgccaacaaatacatcgcactggtcaagaccctctctgtgaacgacagg
ttggaggaggcagtagatatcctgaaggagatgaaagagaaggaggtggtgctgaatgac
gccaacgccaccaccgtcttccacgttctcaacgccgtcgccgctaaggacaacatcgcc
gccgtccgccgattgcaggacaccatcttctcactcggcctgaccaaacccaccgccaat
ctctgctcacccatagtcaccgcctacctgaacagaaaggacgtggccggagcgctggaa
gccaccatcgagtgtcagaagatctacaaccatctgccccgcatccatgacatcatcgtc
gctctggtggagaagggagacaccgatttactgcagaaagccatggactttattagtcag
gagcggggagagatgaccatgctgtatgatctgttcttcggtttcctgcagaccggccgt
taccgagaagcccggaagatcattgagactccaggtttgagagcgaagccgggacgcctg
cagtggtatgcggataagtgcattttgaacagccagatggagaacttggagcagatggtg
gaaatgacggctaagctgtttgagtgcgacagagatgacatgtacagttacatcctcagg
ctctgcaaagaaacaaatgactggcggaaagctgaggccatgtggacgaagatgcaggag
gagaacgtcattcccagagagaggaccctacgtttgctggcagaaattctcaagagtaat
gatcaggaggttccctttgatgtgcctgagatgtggtacaaacgagatgcccccacaaag
acgcccccctcgccagccctcccagcagcggaaagtggtgttgatgttaacgggcgtctg
ttggccctctgcaagaagaacaaggcgaaagaagcgtttgaaatgctgaaagacgctgag
aaaaagggtgcggagattggtcccaccgcctttgaccacctgatccgcaccctgttgtct
cagggattcattgaagacgccatggttgtaaagaaaatggcagaggctcaggttccgggc
ttcaagctgagcgacattgctagcagtttgttgatcgtctctcactgcaagaaaggccag
gctaaagagggtctcgagaggatgaaggccatgattcagttggaccaaattcccttcaac
ctcgccatcaccaggttggtccagaccctggggagccaaggcgacgtggcggggatccag
gaggtgcagtcgctggtcaacagcctcggaacaaatctcaacctgtcctccatggtgttt
gtcaacaacaccgccttggcacacatcaaaaacggcgatgtggatgcagccgtggagctg
ctggatggaatctacaccgctccgaactccaccaaccccagcatggccttcatcttcaga
aagctcctggagtccggcaacgaccaagctctggacaagctgagcgccatggcagagcgt
ctagccaatcacttcgcctgctacagaccagcttcggatctcttcctgcagctgctggat
ctggataaagtggaggatgctaaattcatgctggcacgctgcaacgctgtggcccaacag
aaagacattttgatgtcctttttgtctcagaaggcccaaagtccaggacagatcgggaag
atcaagaacctgctgagtctggttccggactttgcagagaagagggtggtgtacgcgtac
ctgatgaagtgtcacgttctggataaggacttgacgtcggccaaggctttgtacgagcag
atgctgagggagggggtcaccgtcgacgagctgtcactcaaacggctggcgaggctgtac
cgcgaaacgggagagacggcgcccttccccgaacccccggagtcctttaagttttacgca
gacaagctgaaggagctcgctgccaaaacccaaacgacggcggaggagtaa
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