Oryzias melastigma (Indian medaka): 112161667 Help Entry 112161667         CDS       T07439                                  Symbol xpo1b Name (RefSeq) exportin-1 isoform X1   KO K14290   exportin-1 Organism oml  Oryzias melastigma (Indian medaka) Pathway oml03008   Ribosome biogenesis in eukaryotes oml03013   Nucleocytoplasmic transport oml03250   Viral life cycle - HIV-1 Brite KEGG Orthology (KO) [BR:oml00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     112161667 (xpo1b)    03008 Ribosome biogenesis in eukaryotes     112161667 (xpo1b)   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     112161667 (xpo1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oml03019]     112161667 (xpo1b)    03009 Ribosome biogenesis [BR:oml03009]     112161667 (xpo1b)    03016 Transfer RNA biogenesis [BR:oml03016]     112161667 (xpo1b)    03036 Chromosome and associated proteins [BR:oml03036]     112161667 (xpo1b) Messenger RNA biogenesis [BR:oml03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      112161667 (xpo1b) Ribosome biogenesis [BR:oml03009]  Eukaryotic type   Pre-40S particles    Export and cytoplasmic maturation factors     112161667 (xpo1b)   Pre-60S particles     112161667 (xpo1b) Transfer RNA biogenesis [BR:oml03016]  Eukaryotic type   tRNA transport factors    tRNA export factors     112161667 (xpo1b) Chromosome and associated proteins [BR:oml03036]  Eukaryotic type   Centrosome formation proteins    Centrosome duplication proteins     Regulators of centriole replication      112161667 (xpo1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N mTOR_dom TPR_TNPO3_IPO13_2nd Hydrolase_3 BspA_v Motif Other DBs NCBI-GeneID:  112161667 NCBI-ProteinID:  XP_024152766 Ensembl:  ENSOMEG00000001384 LinkDB All DBs Position LG15:complement(11542156..11565527) Genome browser AA seq 1071 aa AA seqDB search MPAVMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW TRVDTILEFSQNMNTKYYALQILETVIKARWKILPRNQCEGIKKYVVGLIIKTSSDASNV EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE FPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITA PLSPANPASNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEMPEEMCD NT seq 3216 nt NT seq  +upstreamnt  +downstreamnt atgccagcagttatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac cagaaattggatatcaacctactggacaatgtggtgaactgtctatatcatggggtcgga cctcagcaaagaatggcccaagaggtgttgacacacttaaaagagcaccctgatgcatgg acgcgagtggacaccatcctggagttctctcagaacatgaacaccaaatactatgctctt cagattttggaaacggttatcaaagcacgatggaagattcttcctcgaaatcagtgtgaa ggtattaaaaagtatgttgtcggactcattatcaagacttcatcagatgcatcaaatgta gagaaagaaaaagtgtacattggaaagctgaatatgatccttgttcagatcctgaagcag gagtggcccaagcactggccgacgttcatcagcgacatcgtgggggcgagtcgcaccagc gagagcctttgtcagaacaacatggtcatcctgaagctgctcagcgaggaagtgttcgac ttctccagtggccagatgacccaggtcaaagccaagcacctaaaggacagcatgtgcaac gaattctcccagatcttccagctgtgtcagtttgttatggagaattcccagaatgcccct ctcgtgcacgccaccctggagaccctcttgcgtttccttaactggattccgctgggctac atctttgaaaccaagctgatcagcacgctggtgtacaagttcctgaacgtgcccatgttt cgcaacgtgacactgaagtgcctgacggagatcgccggtgtgagtgtcagccagtacgag gagcagtttgtcacgctcttcaccctcactatgtgtcagctcaagcagatgcttcccctg aacaccaacattcggttggcctacgccaacggcaaggacgacgagcagaacttcatccag aacctcagcctgttcctgtgcaccttcctgaaagaacatgggcagctcattgagaagagg ctgaacctcagagagacgctcatggaggctctccactacatgctcctggtgtcagaggtg gaggaaaccgagatcttcaaaatttgtctggagtactggaaccacctggcagcagaactc tacagagaaagtccgttctccacgtccacgtctcctctgctgtccgggaatcagcacttc gacgttccgccgcgcaggcagctctatctgccagtgctctccaaggtccgtctgctgatg gtgagtcggatggccaagccggaggaggtgctggtggtggagaacgaccagggggaggtg gtcagagagtttatgaaggacaccgattccatcaacctgtacaagaacatgagagaaacc ctggtctacctgactcacctggattacgcagacacggagcgcatcatgactgagaagctt cacaaccaggtcaacggaaccgagtggtcctggaagaacctcaacaccctgtgctgggcc atcgggtccatcagtggagccatgcacgaagaggacgagaagaggttcctggttacagtc atcaaggatttgttgggtctttgtgagcagaagcgaggaaaagacaacaaagccatcatt gcttcaaacatcatgtacatcgtcggccagtacccgcgcttcctcagagctcactggaag ttcctcaagacagtggtcaacaagctgtttgagttcatgcacgaaacccacgacggcgtt caggacatggcgtgcgataccttcatcaagattgctcagaaatgccggcgccacttcatc caggtgcaggtgggagaggtgatgcccttcatcgacgagatcctcaacaacataaacacc atcatctgtgacctgcagcctcagcaggttcacacgttttacgaggcggtgggatacatg atcggagctcagacagaccaggccgtccaggagcacctgatagagaagtacatgctgctg cccaatcaagtgtgggacagcatcatccagcaggccaccaagaacgtggacatcctgaag gacccggagaccgtcaagcaactgggcagcatcctgaagaccaacgtcagagcctgcaag gccgtgggacaccccttcgtcatccagctggggcgcatctacctggacatgctcaacgtg tacaagtgcctcagcgagaacatctctgccgctattcagacaaacggcgagatggtgacc aaacagccgctgatccggagcatgagaacagtgaaacgagagacgctgaaactgatctca ggatgggtcagccgatcaaacgacccgcagatggttggagaaaacttcgtccctccgctg ttggacgccgtcctcattgattaccaacgcaacgtccctgcagcccgggagcccgaggtc ctcagcaccatggcaaccatcgttaacaaactgggcggccacatcaccagcgaaatcccc caaatctttgacgcggtctttgaatgcacactaaacatgatcaacaagaactttgaggag tttccggagcatcggactcacttcttctacctgctccaagccgtgaactcgcactgcttc cctgcgttcctggccatccctccagcccagtttaagctggtgttggactccattatttgg gccttcaaacacaccatgaggaacgtggccgacacaggtctgcagattctctacactttg cttcaaaatgtggcccaggaggaggcggctgctcagagcttctaccagacgtatttctgc gacatcctgcagcacatcttctctgtggtcacagacacgtcacacactgctggcctgacg atgcatgcatccatcctggcttacatgttcaacctggtagaagaagggaagatcacagcg ccgctgagtcccgccaaccccgccagcaaccaggtgttcatacaagaatatgtggctaac ctgctgaagactgccttcccccaccttcaggatgctcaggtgaaggtgtttgtgaccggg ctgttcagcttaaaccaggacattcctgccttcaaggagcacctgagggacttcctggtc caaataaaggagtttgcgggcgaggacacctcggatttgttcctggaggagagggaggcc tcgctgcggcaggcccaggaggagaaacacaagatccagatgtcagtgccgggcatcctc aacccccacgagatgccggaggagatgtgcgactga

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