Oryzias melastigma (Indian medaka): 112161690
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Entry
112161690 CDS
T07439
Name
(RefSeq) sorbin and SH3 domain-containing protein 1
KO
K06086
sorbin and SH3 domain containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03320
PPAR signaling pathway
oml04520
Adherens junction
oml04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112161690
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112161690
03320 PPAR signaling pathway
112161690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112161690
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
112161690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
112161690
NCBI-ProteinID:
XP_024152803
LinkDB
All DBs
Position
LG15:complement(29195714..29223833)
Genome browser
AA seq
1504 aa
AA seq
DB search
MFVPLLGLKPADGLLSKKQFSTGIQKSCPAEGGPRPRVAPGPRAVCAVRITPLKTMKGSP
DLIPAAGLDPSRVCKGKGVVTLRATLVHVDDEDCITPEPGVTTPPSAWSGQVNGGGSEAG
LAEGAPLRLDNNALSQPHLIGSISRNPASTSFPTPVYPSTRAVNPTLVLLQHNREQQKIL
FGLEGPTSERKQSPDPGGESLSPVSVMDDGKRLRLSQPPPVFNPLNKPVVPERSTEKSKE
WYKTMFKQIHQVPESIEENPYRPTYIFPENYDIPMKIKDDGPAPFTYLEDGKAVPRSQSD
SVVESRGRSVPVPTRYSSLKPSARRNEWEPPDKKVDTRKYRAEPRSIFEYEPGKSSVLKL
ERTTQDVSPEDVDLESEPWYRFFSEMEFDKASAPSFSPLETASDLQPFSSNKSAHSEVEK
DRGSSTGEPVAPECDRHVYKSVLEGGDIPLQGLRALNKRHGSSSSSKVDYKGGNGYIISP
CSSVNSRSVLASNAIGDQCKSKKTLSAAKACIPQILPSKFKPKLLPPSGDSQDSRTEAVR
HTKAHSCEDLYTGRCGTVCAAAGEPGSETDSDKSGCGSDCTDGLGNDSPAIRRTTSEFSS
LYRTMHHIQRPSSAGCSPHGSVRSLTSLFEKVKAETESSEADGSGGVSKDSVSSRVSAFE
MIIQRSSSTPSRSASLPTLHSSHSPNHKPAVLYMGAAVSAEALLVPDTTSTIGCTPEEPE
ESEAKKPRENTVPSENHLTEEEAGELNVQTEAEVEQICRKSCQDSETKSPSAQLIASSPH
QSHLQHHHHHLLHHLNHQLPLKPSKCKGSCPASYTRFTTILRHERLQATTHQEKPPPSEK
KATLPGNLLLMGPAPFRLRKNLQSHQTRRTLATKVTVSTQRPCTLSTELRPLIPQRLSSL
EVLERLNNGEDTDHLNNGQNLDANGNLLQPLSAHRRDSSPAHGENADEALRKRHGDKEKI
LEEQRRLKREQEEADTASRRHTGIVPTHHQFITNERFGDLLNITDNTEKRKSGIERTPAR
ARFDFRAETLKELPFQKGDIVYIIRQVDQNWYEGEHHGRVGIFPRSYVELLPPTEKAQPK
KSAPVQVLEYGEAIARFNFAGDTVVEMSFRKGERITLIRRVDENWYEGKISGTNRQGIFP
VTYVDVNKRPRVKNGVEYPDPPVSYSPQRSTNASPQPPKLYPNRLTTSPLPLPRSARRSV
SPEVHAVSSEWISLTVGGGSPPAAPTPPLPPLPTVSYRWGEYLPPPFSASPVPLTTGSPH
CISPMISPSASPLPPPYPPRPNSATPFLTFTPPQGQDLLSCRSPHLSRSVSPSSGPVLEG
WLRGEKELTEGECAEGDRGRAAKGSRQNSPAEFVKNEADHDGRSSRSPVMLFDIQDNNNV
NSFAEAVCNEILNIAETSVRYCSTLSHPHNDSVHRLHPHPSKPCLIISQQPQSHSSSPEP
SRLSCGIFQALYSYVPQNDDELELQEGDLVSVMEKCDDGWFVGTSKRTKQFGTFPGNYVK
EVKL
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccctcttttgggtctcaaacctgcagatggtttactgtctaagaaacaattt
tctactggaattcagaagagctgtccagcagagggcggccccagaccgagagtggcccct
ggccctcgagcagtttgtgcggtcaggatcacgccgctgaagacgatgaaaggctctcca
gacctgattcctgcagcaggtttggaccccagcagagtctgcaaagggaaaggagtcgtg
actctgagggccacgctggtgcacgtagacgatgaagactgcataaccccagagccagga
gtcaccacaccgccaagcgcctggagcggtcaggtgaatggaggcggttctgaagcagga
ttggctgaaggagctcctctgcgtctggacaacaacgctctgagccagcctcatttgatt
ggaagcatcagcagaaatccagcttccacaagttttcctacccctgtttacccctccacc
agagctgtgaaccccaccctcgtcctgctgcagcacaacagagagcagcaaaagattctg
tttggtttggaaggcccgacctcagagaggaagcagagccccgacccggggggggaatca
ctgagccctgtgtctgttatggatgatgggaaaaggctgcggctgtcacagcccccccct
gttttcaaccctctcaacaagcctgttgttcctgagcgaagcactgaaaagtccaaagag
tggtataagacaatgttcaagcagatccaccaagtgcctgagtccattgaggaaaacccg
taccgccccacctacattttccccgagaattatgacattcccatgaaaataaaagatgat
ggccccgccccctttacttaccttgaagatggaaaagcggtcccacgctcacagagtgac
agcgtggtggagtccagaggcagatcggtgccggtgccaactcgctactcctccctcaaa
ccttcagccagaaggaatgagtgggagcccccagacaaaaaggtagacaccaggaagtac
cgcgccgagcccaggagcatctttgagtacgagccggggaaatcatccgtgctgaagctg
gagagaacgactcaggatgtaagtccagaagatgtagatttagagagtgagccttggtat
agattcttttcagagatggagtttgacaaagcgagtgccccctccttcagccccctggaa
acagcctccgacctgcagccgttctcctcgaacaagtcagctcacagcgaggtggagaag
gacagaggatcatccacaggggagcctgtggctccagaatgcgaccgacatgtttacaaa
agtgtcctggagggcggcgacattcctttgcaaggtctacgggctctaaacaaacgccat
ggcagctcatcatcctctaaagtggattataaaggtgggaatggctatataatttcaccc
tgctcctctgtaaatagtcgatcggttcttgccagtaatgcaataggtgaccaatgtaag
agtaagaagactctgtctgctgccaaagcctgcattccccaaatcctgccttctaagttc
aaacccaagctgctgccacctagtggcgacagccaggacagcaggactgaagctgtcaga
cacaccaaggctcacagctgtgaggatctttacacgggccggtgtggaaccgtctgcgct
gccgcaggggaaccggggagtgaaacggactcagacaagtctggctgtggcagtgactgt
accgatggcctcgggaatgactcccctgcaatcagaaggaccacgtcggagttttccagt
ctgtacagaaccatgcatcacatccagcggcccagctctgcagggtgcagcccccacggc
agcgtccgcagcctgacctctctgtttgaaaaggtcaaggcagagactgagagttcagag
gcagatggcagcggcggcgtttcaaaggacagcgtgtcgtcacgagtcagcgcgtttgaa
atgatcatacagagatccagctcgactcccagccgctctgcctcccttccaaccctgcac
tccagccacagtcccaaccacaaacctgctgtcctctacatgggggctgcagtgtcggct
gaagctcttctagtacccgacaccacgtctacaattggctgcaccccagaggagccagag
gagtcagaggccaagaaaccaagagaaaacacagtcccatcagagaaccacctgactgag
gaggaggcaggagaactgaacgttcaaactgaagctgaagtggagcagatctgcaggaaa
agttgtcaagacagtgaaacaaagagtccttcagcacagcttatagcatcgtctccacac
caaagccatctccagcaccaccaccaccacctcctgcaccacctgaaccatcagctgccc
ctcaaaccgagcaaatgcaaaggctcctgccctgcctcctacacccgcttcaccaccatc
ctccgacatgagaggctgcaagccacaacgcatcaggagaagccccccccttctgagaag
aaggccactttacctggaaaccttctgctcatgggtcctgcccccttcagactacgaaag
aacctgcagtcgcaccaaacacggagaacgttagctaccaaggtgaccgtgagcacccag
agaccctgcactctgtccactgagctcagacctctgatccctcagcgcctctcctccctg
gaggtcctggagaggctgaacaacggagaggacactgaccatctgaataacgggcagaac
ttggacgccaacgggaacctcctgcagccgctgtcagctcaccgtagagactcctccccg
gctcacggggaaaacgcagatgaggctctcagaaagcgtcatggtgacaaagagaaaatt
ttggaggagcagcggcggctaaagcgagaacaggaagaggctgacacagcatcacggaga
cacacgggcattgtcccaacgcaccaccagttcatcaccaatgagcgcttcggagacctg
ctcaacatcacagataacacggagaaaaggaagtctggaatcgagagaacaccagccaga
gctcgctttgacttcagagcagaaacgttaaaggaattaccatttcagaagggagacatt
gtgtatatcattcgacaagtggatcagaactggtatgagggcgagcatcatggacgagtt
ggtattttccctcgaagttacgttgagctgctcccccctacagagaaagcacagcccaag
aaaagtgctccagttcaggttctggaatatggagaggccatcgcccgctttaactttgca
ggcgacacagtggtggagatgtccttcaggaagggggagcgaatcacgctgatacgcaga
gtggacgagaactggtatgaaggcaagatttccggcaccaatcggcaaggcatcttcccc
gtcacctatgtggacgtgaacaagcggccacgggttaagaacggcgtggagtaccccgac
ccccctgtcagctactccccacagcgcagcaccaacgcctccccccagcctccaaagctg
taccccaatcgtctgaccacctcccccctgcccctgccccgctctgcccgccgctccgtt
tcacctgaggtccacgctgtctcctccgagtggatctcactgactgtgggaggtggaagt
ccccctgcggccccaacccctcctttgccaccactccccactgtctcttaccgctggggc
gaatacctgcccccccctttctctgccagcccggtgccactgaccaccggcagcccacac
tgcatctcccccatgatctcaccatctgcctcccctctgcccccgccgtacccgcccaga
cctaactctgccacccccttcctcacgttcaccccaccccaggggcaggacttgttgtcc
tgtcgctccccccatctgtcgcgcagtgtgagcccctccagcgggccggtgctggagggc
tggctgaggggggagaaggagctgacagagggcgagtgcgctgagggggacaggggccga
gctgccaagggaagcaggcagaatagccctgcagagtttgttaaaaatgaagctgaccat
gatgggcggagctccagaagccctgtgatgctttttgacattcaagacaacaacaacgtg
aactcgtttgcggaggccgtatgtaatgagatcttgaatatagctgagacctcggtgagg
tactgcagcaccctgtcccacccccacaatgactctgtgcacagactgcacccccacccc
agtaaaccgtgtctcatcatttcccagcaaccccagtcccacagcagcagccccgagccc
agccgcctcagctgtggaatcttccaagccttgtacagttacgtgccacagaacgatgac
gagctggagctacaggaaggagatctggtcagtgtgatggagaagtgtgacgatggctgg
tttgttggaacatccaagaggacgaagcagtttgggacttttcctgggaattacgtgaag
gaagtgaaactgtaa
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integrated database retrieval system
