Oryzias melastigma (Indian medaka): 112161714
Help
Entry
112161714 CDS
T07439
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112161714 (arid5b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
ARID
112161714 (arid5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
112161714
NCBI-ProteinID:
XP_024152862
Ensembl:
ENSOMEG00000011504
UniProt:
A0A3B3BYU8
LinkDB
All DBs
Position
LG15:complement(2963848..3067374)
Genome browser
AA seq
1155 aa
AA seq
DB search
MEPNSLKWVGSSCGLHGPYIFYKAFKFHRDGKARILALGDFFFVRCKPEDPICIAELQLL
WEERTSKQLLSSSKLYFLPEDIPQGRTVAHGEHEVIAVSEKVIVRLEDLVKWTVPDFSGW
SHGLKAEPLKPSVLRELGTNGRREALHRYRDSTLTSGLNFKDVQRERAHLGQEEDGRKVL
VLSYPQYCRYRSVLARLREQPSSLLIDHTVLALGGIAALGGSTRILYCRDTFEHPTLLQN
ESICDEFAPNLKGRPRKKKLSVSQRRESQGHAQGQGSTPSSAAVGAQEPSSPESKATTKV
KPNCKTVLNGKITSAAKQRAAGLNKKSLIEEKERAKEKEERKEEKKEEEASEESRAEEQA
FLVSLYKYMKDRDTPIERIPFLGFKQINLWTMFQAAQKLGGYELITVRRQWKHVYDELGG
NPSSTSAATCTRRHYERLLLPYERNIKGEQDKPLPLAKPRKQDGGQEKASVAGAKAKGVG
AKKLKSPNSPKSGSKKDRGESVKGQEQSQDFKGKEENPERESVTQDSSLQDEPIIIEEEE
LHLTLKKEESLSAEQPSLLCPKEPRCRSPHAGLPLHIRPGLQSEWRKINEPISLKVTGEQ
QTEGHFIPKNPYLLHRWDQSKAAALQEPFSKVKDSAEHHGGRVGKVLPMCKQADGQCLNL
SIDSLQDKEDYGVVKKESGQSPGQAAAYSKTSQGVMSPLAKKKLLSQVCESNPFSFSPLQ
PSLSTGSSFPVLSVSEEKRKGEDKVAGQRRGSDGVQEVPSIFRPSVIQHAQSSKAQPNGG
PAERTAAGEPPDGYGCRTNLPAQVSAPWQPFLPRTQAPDAVESSGDKLLQVAQSRSFAGD
CYSSPHLHSLYRQTESCLSQERMAGFASGERREHYTREREGGQGFVCGSLEPEGLAYRCN
YSDRTESREADDEPRDFSISKPLSQRFSKPPFCSLPYSIMHQNLDSHPKACRVPPMTISP
PKQSSAESMQSFPSPKVSGESSLSSPLRPSKRSLAEPEGEDAPERKVRVVTPVHPTGTVR
RSDPEELKPAEPAHAIHLNNHLPEGHPTTTFLSPHTAHLYPGIYTHGSLVSQDGLRQHPG
LQYLKSQSAVSPLVPPLTLHSMMFHRQLLASSPSPHHFYRHPGGAALYEDLLHHFYPLST
LPPPQLSSVHPSTRL
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcactgaagtgggtgggctcatcttgcggtttacatggaccatatata
ttctataaagcctttaaatttcaccgggacggcaaagcgagaatcctcgcgctcggagac
tttttcttcgtcagatgtaaacccgaggatcctatttgcatagcggagctccagcttctg
tgggaagaaaggacaagcaagcaacttttatcaagctcgaaactttattttctgcctgag
gatattccccagggacgcacggtcgctcacggagagcacgaggtgatagcagtgtccgag
aaggtgatagtgcggctggaagacctggtgaagtggacggtaccagacttctcaggatgg
tcccacggtctgaaggccgagcccctcaaaccgtccgtgcttcgggagctggggaccaat
gggaggcgcgaggccctccaccgctacagggacagcaccttgaccagcggactcaacttc
aaggacgtccagagagagcgggcacatctcggccaagaggaggacggacgaaaagtttta
gtcctgagttacccgcagtattgccgctaccgctccgttttggcccggctacgagagcag
ccctcgtccctgctaatagaccacacggtgctggcgctgggcggcatcgccgcgctgggc
gggagcacgaggatcctgtactgtcgcgacacattcgaacaccccaccctcctgcagaac
gagagcatttgtgacgaattcgctcccaacctaaaggggcgacctcggaagaagaagctg
tccgtctctcagaggagggagtcccagggtcacgctcagggtcaaggctcgaccccgagt
tcagcagctgttggagcgcaggagccgtccagcccggagagcaaagctacaaccaaggtc
aagcccaactgtaaaacggtactcaacggaaaaatcacctccgcagccaagcaaagggcc
gccggcctcaataagaaatccttaattgaggagaaggagagggcaaaagagaaggaggag
agaaaggaggagaagaaagaggaggaagcatcagaggagagccgggcggaggagcaggct
ttcttagtatcgctgtacaagtacatgaaagacagagacacgcccatagagaggatcccc
ttcctcggcttcaaacagatcaacctttggactatgtttcaagctgctcagaaactcgga
ggatatgagctgatcacggttcgcaggcagtggaaacacgtgtacgatgaactgggcggg
aaccccagcagcacaagcgccgccacgtgtacacggagacactacgagaggctcctcctt
ccgtatgagaggaacatcaaaggcgagcaggacaagcccctccccttggccaaacccagg
aagcaggacggcggccaagagaaggcctctgtcgccggggccaaagccaaaggagtgggg
gccaaaaagctaaaaagtcccaacagtccaaagtcggggagcaaaaaggaccgaggggag
agcgtgaagggccaagaacaatcacaggacttcaaggggaaagaagagaatccggagcga
gaatcagtaacgcaagattcctccctgcaggacgagcccataataatagaggaggaggag
ttacatctcactttgaagaaggaagaatctctgtccgcggagcagccgtctctattgtgc
cccaaagagccgcgctgcagatccccccacgccggcctccccctccacatcaggccgggc
ctccagtccgaatggaggaaaatcaatgagcccatctcattgaaagtcacgggcgaacaa
caaactgaagggcatttcattcctaaaaatccttacctgcttcatcgctgggatcagagt
aaagcggcggctctgcaggagcccttctctaaggtcaaagactccgccgagcatcacggt
gggagagtggggaaggtgctgcccatgtgcaagcaggcagatggacaatgtctaaatctg
agcatagattctttacaggacaaagaggactacggcgtcgtgaagaaagagtccggtcag
agccccgggcaagcagcggcctacagcaagaccagtcagggggtcatgtccccgctggcc
aaaaagaagctcctctcccaagtgtgtgagtccaaccccttctccttttcccctcttcag
ccctctctctccactggatcgtctttcccggttttatcagtgtctgaagagaagaggaaa
ggggaggacaaggtggcggggcagaggcgtggttcggacggcgtccaagaggtaccgtct
atattcaggccgtcggtcatccagcacgctcagagcagcaaggctcaaccgaacggaggc
ccagccgagaggaccgctgccggggagccgccggacggctacggctgccggacgaatctg
ccggcccaggtcagcgcgccgtggcaacccttcctgccacgcacccaagctccggacgcc
gtcgagagcagcggagacaagctgcttcaagtagctcagtccagaagctttgcaggcgac
tgctactcctcccctcacctccacagtctgtacagacaaacggagagctgcctgagccag
gagaggatggccggcttcgccagcggagagcggagggagcactacacccgagagcgcgag
ggcgggcagggctttgtttgtggcagcttggagccggagggcctggcctacaggtgtaac
tacagcgacaggactgagagcagagaggccgacgacgagcctcgagacttctccatttct
aaacctctgtctcagaggttctccaagccccccttttgtagtctcccctattcaatcatg
caccagaatttagactcccatcctaaagcgtgccgcgttcctcctatgacaatctctccc
cccaaacagagctcagccgagtccatgcaatcctttcccagccccaaagtatccggggag
tcgtccctctccagcccccttcgacccagtaaaaggagcctggcagaacccgagggcgag
gacgccccggaaagaaaagtgcgggtagtgacgccggttcatccgaccggcaccgtgaga
cgcagcgaccccgaggaactgaaaccagcagagccggcccacgccatccacctcaacaat
cacctacccgagggccaccccacgaccaccttcctgtcgccccacaccgcacacctctac
cccggcatctacacgcacggcagcctggtgtcgcaggacggcctgcggcagcacccgggc
ctgcagtacttaaagagccagtcggccgtgtcgcccctggtgccgcctctgaccctccac
tccatgatgttccacaggcagctactggcctccagccccagcccccaccacttctacagg
caccctggcggggcggcgctgtacgaagacctgttgcaccatttttacccgctctccacc
ctcccaccgccccagctgtcctcggtacaccccagcaccagactgtaa
DBGET
integrated database retrieval system
