Oryzias melastigma (Indian medaka): 112161767
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Entry
112161767 CDS
T07439
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04517
IgSF CAM signaling
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112161767
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112161767
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112161767
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112161767
Intermediate filaments
Intermediate filament-binding proteins
112161767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
LPD22
Motif
Other DBs
NCBI-GeneID:
112161767
NCBI-ProteinID:
XP_024152977
LinkDB
All DBs
Position
LG15:complement(14049215..14163431)
Genome browser
AA seq
2354 aa
AA seq
DB search
MEFQNASAGLGGPLSPLSPTSDYGGPGPSHGPSLSPSRGPSPDPGLGGASAAFNYNQLEG
RFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKP
TKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIS
VETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFD
KLKKSNAHYNLQNAFNMAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKAL
KVEGKRIGKVLDHAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQA
FNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERLEKAE
HERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKK
HEAIETDIAAYEERVQAVVSVAKELEAESYHDIKRITARKDNVIRLWEYLLELLKARRHR
LEQNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADR
VRNVNSNAQRFASDGEGYKPCDPQIIRDRVAHLEFCYQELSQLAAERRARLEESRRLWKF
FWEMAEEEGWIREKEQILSSEDYGKDLTGALRLLSQHKAFEDEMSGRAAHLQQTIKQGED
LVADNHFGADKIRERIRDIQEQWASLEQLTAVRKSRLEEACNHHQFQADADDIDTWMLDV
LRIVSSVDVGHDEFSTQALVKKHKDVAEEIDSYRPVIEALHDQARTLPPEKANSEEVKSR
LAGIEERYKEVAELTRLRKQALQDALALYRMLSEASACEVWIDEKEQWLNSMDIPDKLED
LEVVQHRFESLEPEMNSQASRVAVVNQVARQLIHCGHPSEKEIKAQQDKLNTRWSQFRDL
VDQKKESLVSALGVQNYHLECNETKSWIKEKNKLIESTQELGNDLAGVMALQRKLTGMER
DLVAIEDKMGDLGKEAERLGSEHPEQCEAIKGRLAEITGVWQEMKDSLKNREESLGEASK
LQQFLRDLDDFQSWLSRTQTAIASEDMPNTLTEAEKLLAQHENIKNEIRNYEEDYQKMRD
MGEMVTQGQTDAQHMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEA
FLNNQEYVLAHTEMPTTLEAAEAAIKKQEDFMTTMDANEEKISSVVDTGRRLVADGNVSA
ERIQEKVDSIDQRHKKNRQAASDLLMRLKDNRDLQKFLQDCQELNLWINEKMLTAQDMTY
DEARNLHSKWLKHQAFMAELQSNKEWLDKISKDGQTLMAEKPETEGVVKEKLASLKTMWE
ELESTTQTKAKCLFDANKAELFTQSCADLDKWLNGLEGQLHSDDFGKDLTSVNILLKKQQ
ILESQVEVRQKEVDELKSQSQVLSQEGKDSDEVDSQRIIVEKKFQTLQEPLKKRRDKLMA
SREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRYDD
IFERSQHVLREGSPTAELIRQRLADLQSLWEQIKKETEKRHTRLSEAHEAQQYYFDAAEA
EAWMSEQELYMMSEEKAKDEQSAVAMLKKHQILEQAVEDYADTVHQLSSTSRGLVAAGHP
DSERIGMRQSQVDKLYAGLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSH
ELGQDYEHVTMLQERFREFARDTGTIGQERVDGVNRLADELINSGHGDAATIAEWKDGLN
EAWADLLELIDTRTQILAASYELHKFYHDAKEVLNRILDKHKKLPEELGRDQNTVEALQR
MHTAFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKSLLAAVEGRR
AKLVDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARN
DSFTTCIELGKALLARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSR
DAGVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMEL
LEVRRRQEEEERRKQPEAQSADGVAQNRDELLSQNGLPTEQESPRDNGEGGEVVNGVSEP
SPSGSPGASRKAKSSQAATLPAKSQQDGPTSQQEGFLHRKHEWEGHNKKASSRSWNNVYC
VINQQEMGFYKDQRSAGQGIPYHSEIPVSLKDAVCEVALDYKKKKHVFKLKISDGNEYLF
QAKDDEEMNSWISTISSAISGDKPEVTPSSHSTPAPAARAQTMPAAVATTTAESSPGKRE
KDKEKRFSLFSKKK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcagaacgcttctgctggcctcggcgggccactctcgcccctctcccccacc
tcagactacggtggccccggcccctctcacgggcccagcctcagcccctccagagggccc
agccccgaccccggactcgggggagcctccgccgccttcaactacaaccagctggaggga
cggttcaaacagctgcaagatgaacgtgaggctgtgcagaaaaagaccttcaccaaatgg
gtgaactcccacctgtccagagtctcctgtcggatcacagacctctacatggacctgagg
gatggacggatgctcatcaagttgctggaggtcctgtcaggagaacgactgcccaaaccc
acaaagggtcggatgaggatccactgtctggaaaatgtggacaaggctctgcagttcctg
aaggagcagcgggtccacctggagaacatgggctcccacgacattgttgatgggaaccac
cgcctcactctgggactgatctggaccatcatcctccgcttccagatccaggacatcagc
gtggagacggaggacaacaaggagaagaagtcggccaaagatgctctgctgctctggtgt
cagatgaagactgccgggtatcccaacgtgaacatccacaacttcaccaccagctggaga
gacggcatggccttcaacgctctcatccacaagcacaggccagacctgatcgactttgac
aaactgaagaagtccaacgctcactacaacctgcagaatgccttcaacatggccgagcag
cacctgggcctcaccaagctgctggaccccgaagacatcagtgtggaccaccccgatgag
aagtccatcatcacctacgtggtcacatactaccactacttctccaagatgaaggctctg
aaggtggaggggaagaggatcggcaaggtgctggaccacgccatcgagaccgagaagatg
attgagaagtacgagtcgctggcgtccgacctgctggagtggatcgaacagaccatcatc
atcctcaacaaccggaagtttgccaactcgctggtgggcgtccagcagcagctgcaggcc
ttcaacacctaccgcaccgtggagaagccgcccaagttcacagagaaggggaacctggag
gttcttctgttcaccatccagagcaagatgagagccaacaaccagaaggtttacaccccc
cgagagggcaagctcatctctgacatcaacaaggcgtgggagcggctggagaaggcggag
catgagcgggagctagcgctgaggacggagctcattcgtcaggagaagctggagcagctt
gcacgacgcttcgaccgcaaagccgccatgagggaaacgtggctgagcgagaaccaacgg
ctggtctcacaggacaactttggttttgacctccaggctgtagaagctgcaacaaagaaa
catgaagctatagagactgacatcgctgcgtacgaggagcgagtccaggcggtggtctcc
gtagcgaaggagctggaggcggagagctaccacgacatcaaacgcatcacagcgaggaag
gacaatgtgatcagactgtgggagtatctgctggagctgctgaaggcccgcaggcatcgg
ctggagcagaacctgggcctgcagagagtcttccaggagatgctctacatcatggactgg
atggacgagatgaagatgctgctgctgtctcaggactacgggaagcacctgctgggcgtg
gaggacctgctgcagaaacacgctctggtggaggccgacatcgccatccaggctgaccgc
gtccggaacgtcaacagcaacgctcagaggtttgccagcgacggcgaaggctacaagccc
tgcgatcctcagatcatcagagaccgggtcgctcacctggagttctgctaccaggagctg
agtcagctggcggctgagcggcgagctcgccttgaagagtcccgtcgcctctggaagttc
ttctgggagatggcggaagaggagggatggatcagggagaaggagcagatactttcctct
gaggattatgggaaggatctgacgggcgccctgcgcctgctgagtcagcacaaagccttt
gaggacgagatgagcgggcgagccgcccacctgcagcagaccatcaaacaaggcgaggac
ctggtggccgacaaccacttcggggccgacaagatcagggagcgaatccgtgacattcag
gaacagtgggcgagtctggagcagctcaccgctgtgaggaaaagccggctggaggaagcc
tgcaaccaccaccagttccaggctgatgcggacgacatcgacacatggatgctggacgtt
ctgcgaatcgtctccagcgtcgatgtcggccacgacgagttctccacccaggctctggtg
aagaaacacaaagatgtggcggaggagatcgacagctaccgccccgtcatcgaggctctg
cacgatcaggcgcggacgttgccgcccgaaaaggccaactctgaggaggtgaagagtcgt
ctggcgggcatcgaggagcgctataaggaggtggcggagctgacgcggctcaggaagcag
gcgctgcaggacgctctggcgctctacaggatgctgagtgaagccagtgcctgcgaggtg
tggatcgacgagaaggagcagtggctcaacagcatggacatccctgacaaactggaggat
ctggaggtcgtccagcaccggtttgagagtttggagcctgagatgaacagccaggcgtcc
cgggtcgccgtggtgaaccaggttgccaggcagctgatccactgcggacatcccagtgag
aaggagatcaaagcccagcaggacaaactcaacaccaggtggagccagttcagagacctg
gtggaccagaagaaggagagcctggtctcggctctgggagtccagaactaccatctggag
tgtaatgagaccaagtcctggatcaaggagaagaacaagttgatcgagtccactcaggag
ctggggaacgacctggccggcgtcatggctctgcagaggaagctgacggggatggagcgc
gacctcgtggccatcgaggacaagatgggcgacctggggaaggaggcggagcgtctgggc
tccgaacacccagagcagtgcgaggccatcaaaggccgcctggctgagatcacgggcgtc
tggcaggagatgaaggacagtctgaagaaccgcgaggaatctctcggggaggccagcaaa
ctccagcagttcctgcgcgacctggacgacttccagtcgtggctgtcgcggacgcagacc
gccatcgcctcggaggacatgcccaacacgctgaccgaggcggagaagctgctggcccag
cacgagaacatcaagaacgagatccgcaactacgaggaggactaccagaagatgagggac
atgggcgagatggtgacgcagggccagacggacgcccagcacatgttcctgcggcagcgg
ctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgggagaaccggcagaat
ctgctgtcccagtcgcacgcctaccagctgttcctcagagacaccaagcaggccgaagcc
ttcctcaacaaccaggagtacgttctggcgcacacggagatgcccaccacgttggaggcg
gcagaggccgccatcaagaagcaggaagacttcatgaccaccatggacgccaacgaggag
aagatcagcagtgtggttgataccggccgccgcctggtcgccgacggcaacgtgagcgcc
gagcggatccaggagaaggtggactccattgatcaaaggcacaagaagaaccgtcaggcc
gccagcgacctgctgatgaggctgaaggacaacagagacctgcagaagttcctgcaggac
tgccaggagctgaatctgtggatcaacgagaagatgctgacggctcaggacatgacgtat
gacgaggccaggaacctccacagcaagtggctgaagcaccaggccttcatggctgagctg
cagtccaacaaggagtggctggacaagatcagcaaggacggacaaacgctgatggcggag
aagccggagacggagggcgtggtgaaggagaagctggcatccctgaagaccatgtgggag
gagctagagtcgaccacgcagaccaaagccaagtgtctgtttgacgccaacaaggccgag
ctgttcacgcagagctgcgccgacctggacaagtggctgaacggcctggagggtcagctg
cactccgacgacttcggcaaagacctgacgtccgtcaacatcctgctgaaaaagcagcag
atcctggagagccaggtggaggtgcggcagaaggaggtggatgagctgaagagtcagtcg
caggtcctcagtcaggaagggaaggactcggacgaggtggacagccagcggatcatcgtg
gagaagaagttccagacgctgcaggagcccctgaagaagaggcgggacaagctcatggcg
tcccgtgaaatccaccagttcaacagagacgtggaggacgagatcctgtgggtggaggag
cggatgcctctggccacgtccacggaccacggacacaacctgcagaccgtgcagctgctc
atcaagaagaaccagaccctgcagaaggagatccaggggcaccagccgcgctacgacgac
atctttgagcgcagccagcacgtgctgagggagggcagccccacggccgagctgatccgc
cagcggctcgccgacctccagtccctgtgggagcagatcaagaaggagacggagaagcgc
cacacccgcctcagcgaggcccacgaggcccagcagtactactttgacgccgcggaggcc
gaggcctggatgagcgagcaggagctgtacatgatgtcggaggagaaggccaaggacgag
cagagcgccgtcgccatgctgaagaaacaccagatcctggagcaggccgtggaggactac
gccgacaccgtccaccagctgtccagcaccagccgggggctggttgctgccggacacccc
gacagcgagcgcatcgggatgcggcagtctcaagtggacaaactctacgccggactgaag
gacttagccgaggaacgccgagggaagctggatgagcgtttccgacttttccagctcaac
cgggaggtggacgacctggagcagtggatcgcagaaagagaggtggtggccggatctcac
gagctcggacaggactacgagcacgtcacgatgctgcaggagcgtttcagagaattcgcc
cgggacaccgggaccatcggacaggagcgcgtggacggcgtcaacaggctggccgacgag
ctcatcaacagcggccacggcgacgctgccaccatcgccgagtggaaggacggcctgaac
gaggcctgggccgacctgctggagctcatcgacacccgcacgcagatcctggccgcctcc
tatgaactgcacaagttctaccacgacgccaaggaggtcctcaaccggatcctggacaag
cacaagaagcttccggaggaactgggccgggaccagaacacagtggaggccctgcagaga
atgcacaccgcctttgaacatgacatccaggctctgggaacacaggtccggcagctgcag
gaggacgccgtccgtctacagtcggcttacgccggagacaaagctgacgacatccaaaag
agagaaggagaggtcctggaggcctggaagagcctgctggcagcggtggaaggccggcga
gccaagctggtcgacaccggagacaagttccgcttcttcagcatggtgcgtgacctgatg
ctgtggatggaggacgtcatccgcctgatcgaagcccaggagaagcccagggacgtgtcg
tcagtggagctgctgatgaacaaccaccaaggcatcaaggcggagatcgacgcccgaaac
gacagcttcaccacctgtattgagctggggaaggccctgctggcgaggaagcactacgct
tcagaggagattaaagagaagttgctgcagttgacggataagaggaaagagatgattgac
aagtgggaggatagatgggagtggctcagactagttctggaggtgcaccagttctccagg
gacgcgggggtggcggaggcgtggctgctgggacaggagccttacctgtccagcagggag
atcgggcagagcgtggacgaggtggagaagctcatcaaacgccacgaggccttcgagaag
tcagccgccacctgggaggagcgcttctccgcgctggagaggctgaccacgatggagtta
ctggaagtgaggagaaggcaagaggaagaagagaggaggaagcagccggaggctcagtct
gcagacggtgtagcacagaacagggacgagctgctgtctcagaacgggctgccaaccgag
caggagtctcccagggacaacggcgaaggtggtgaggtggtaaacggcgtgtcagagccc
agtccatcggggtctccgggggcgtctcgcaaggccaagagcagccaggcggccactctg
ccggccaaaagccagcaggacggccctacgtcccagcaggagggcttcctgcaccgcaaa
cacgagtgggagggtcacaacaagaaagcctccagcaggtcgtggaacaacgtgtactgt
gtgatcaaccagcaggagatgggtttctacaaggaccagaggagcgccggtcagggcatt
ccgtatcacagcgagattcccgtcagcctgaaggacgccgtgtgcgaggtggcgctggac
tacaaaaagaagaagcacgtctttaagctgaaaatttccgacgggaacgagtacctgttc
caggccaaagatgacgaggagatgaactcgtggatctcgaccatctccagcgccatttca
ggcgacaagccagaggtcacacccagcagccacagcacgccggccccggccgcacgagcg
cagacgatgccggccgccgtcgccacgacgacagcagagtccagcccgggcaaacgagag
aaagacaaggaaaagcgcttcagtctgtttagcaagaaaaaatag
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integrated database retrieval system
