Oryzias melastigma (Indian medaka): 112161780
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Entry
112161780 CDS
T07439
Symbol
ppp2r2d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03015
mRNA surveillance pathway
oml04261
Adrenergic signaling in cardiomyocytes
oml04382
Cornified envelope formation
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112161780 (ppp2r2d)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112161780 (ppp2r2d)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112161780 (ppp2r2d)
09158 Development and regeneration
04382 Cornified envelope formation
112161780 (ppp2r2d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112161780 (ppp2r2d)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112161780 (ppp2r2d)
03036 Chromosome and associated proteins [BR:
oml03036
]
112161780 (ppp2r2d)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112161780 (ppp2r2d)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112161780 (ppp2r2d)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112161780 (ppp2r2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
112161780
NCBI-ProteinID:
XP_024152997
Ensembl:
ENSOMEG00000007643
LinkDB
All DBs
Position
LG15:6771463..6778230
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIFQHEQE
SKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKISERDKRAEGYNLKDEDGRVRDPFRITSLRVPVLMPMDLMVEASPRRIFANAHTYHI
NSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPHQCN
VFVYSSSKGTIRLCDMREAALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRRDITLEASRESSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKDNVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagttgcaggaggaaatgatttccagtggtgtttctctcaagtaaagggagcg
atagatgaagatgttgcggaagcggacataatctcgacggttgagttcaactattctgga
gaattacttgcaactggagacaaaggcgggagagtagtgatttttcagcatgaacaggag
tctaagaatcgtccacacttgcgtggagagtacaacgtctatagcacttttcagagtcac
gagccagaattcgactatttgaaaagtttagaaattgaggaaaaaattaataaaataaga
tggctaccccaacaaaatgctgctcactttctactttcaacaaatgataaaactatcaaa
ttgtggaaaattagtgaaagagataaacgggcggaaggttacaacctgaaagatgaagat
gggcgagtcagagatccttttagaatcacctctttacgggtaccggtgctgatgccaatg
gatctcatggtagaagcaagcccacggaggatctttgcaaatgcgcacacctatcacatt
aattccatttctgtaaatagcgatcacgaaacttacctctccgcagatgacctaagaata
aatctatggcacttggaaatcacagacagaagttttaatattgtagacatcaagcccgcc
aacatggaagagctgacggaagtaatcacagctgccgagtgccatccacaccaatgcaat
gtatttgtgtacagtagtagcaaaggcaccatccgcctgtgtgacatgcgagaggcagca
ctctgcgatagacactccaagttctttgaggaacccgaggatccgagcagccgatccttt
ttctctgagatcatctcctccatctcagacgtgaagttcagtcacagcggacgctacatg
atgacacgtgactacctctccgtcaaggtttgggacctgaacatggagaacaggccagtg
gagacgtatcaggtccatgaataccttcgcagtaaactctgctcgttgtatgaaaacgac
tgcatctttgataagtttgagtgctgctggaatggcagtgacagtgccatcatgaccggc
tcctacaacaacttcttccgaatgttcgaccgcaacacccggcgggacatcacactggag
gcgtcccgggagagcagcaaacccagggccaccctcaaaccgcggaaagtgtccaccggt
ggcaagaggaagaaggacgagatcagcgtggacagcctggacttcaacaagaagatcctt
cacactgcctggcaccccaaagataatgtgatagctgtggcagccaccaacaacttgtac
attttccaggacaaaatcaactag
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