Oryzias melastigma (Indian medaka): 112161848
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Entry
112161848 CDS
T07439
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112161848
Membrane trafficking [BR:
oml04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
112161848
Small GTPases and associated proteins
Rab associated proteins
112161848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
Zn_ribbon_Nudix
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
112161848
NCBI-ProteinID:
XP_024153090
Ensembl:
ENSOMEG00000001229
LinkDB
All DBs
Position
LG15:complement(13331735..13444259)
Genome browser
AA seq
1489 aa
AA seq
DB search
MFAPVGPRGGPRPPVAPAIPEPDLSHLTEDERKIIMAVLARQKEEEAKEEAMLKEEKPIQ
ARTVNLVGQKKPLQQNDVRGIQQQLSSYRETVIRQATAAAGSVHRDDAPTCGICHKTKFA
DGCGSLCSYCQTKFCARCGGRVSLRSNTEDKVVIWVCNNCRKQQEILTKPGDWFSSLSGK
PAGLGSAVSEPSVCQTPGDKLRSRSQAPAGSTSAVQDPSRLSATGPDVRSLSEPPREKRN
GRGGAGRGDWQPGQPRLQTQVSMDRDLRGESRERRESRRLAKGRSLEHDPVGGSSSRTEE
GGYHLDHGGGPHRQVATLPPRGRGHPGPGLGRGMGMGGEMGDGSRAGQRTVGGVGAPHEH
TVSQQAPPPELREPPGLGPGSVTSQGPGGKRTKREKAESMLRNDSLSSDQSESLRPPPPR
PYKSKRGVGAGGKRQTSVSSSEEEGGTTPEYSSADDAEIESVSERGDWESYPHDPTVWHH
PVTWQPSKEGDHLIGRITLSKRSATMPKEAGALLGLKVVGGRITESGRLGAFITKVKKGS
LADVVGHLRAGDEVLQWNGKMLPGATMKEVYNIILESQAEPQVELVVSRPIGVYRKYHDI
PRIPDTSHPPLESTGSSSFESQKMERPSLNVLSPSSPGMLQDAPQLMPGRLSVKLWYDKA
GHQLIVNVLQAVELPLRPDGRPRSPYVKMYFLPDRSDKSKRRTKAVKKTCEPKWNQTFVY
THVHRRDFRNHMLELTLWDQPRSPEEDSTFMGEILIELETALLDDKPHWYPLQTHDVSSI
PLPRPSPFLPRRHPQSDAPGKKLQRSQRVTEPEFDERAAVLSKADGRGRERQREPSSTLE
VPEEQRTPSHHIRSRSVSPRREEQGRNRSRAPNVPTQRSLDDELSHNRRTRSPTRYHDAA
RGCHQGEEYLDDSEVVMIHQSMRGKSAECLHTSDLQPSLDRVKSASTNCLTPDKHVPSPK
NERKSLSKSLPRRRPASPRILIQHASPEEDRMWMLLPTQETLFHSSAKKRQLRTLETPEC
QTLGRKLSDSGRGHLQGGACLSTSVTSSARRVRQLPQLPPQSSTIEQALVAEERVRQLQM
RVHSNRVSAAATSSQQDLDRALKSKRELYKDQRRSSENVSHKSSDSDVSDVSAISRTSSA
SRISSTSYISIQSERPRGRFSRAVRASGRHMMKSTSVSGEIYGMEHADGSQSDTALGSLG
SGIKKRRSSLSQRVVAILPSRRSRSTSQLSQTEAASKEVDRKKEASAGKKSSKAGSSSIQ
RSVETGMAVEYPRGGSAMNRQASRESTDGSMNSYSSEGNLIFSGMRLGADSQFSDFLDGL
GPGQLVGRQTLATPAMGDVQIGLMDKKGQLEVEVIRARGLTPKSGSKSLPAPYVKVYLLE
NGTCKAKKKTKIARKTLEPLYQQHLLFDESPQGKVLQVIVWGDYGRLDHKCFMGVAQILL
EELDLSSTVIGWYKLFPTSSLVDPTLAPLTRLASQTSLDSSGPPPGVRS
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccccggtgggccctcggggcggcccgcgcccacccgtcgctccggccattccg
gagccggacctcagccatctgacggaggacgagaggaagatcatcatggctgtgctggcg
cggcaaaaggaggaggaggcgaaggaggaggccatgttaaaagaggagaagcctattcaa
gcaagaacggtaaacctggttgggcaaaagaaacctctacagcaaaacgacgtccgaggt
atccagcagcagttgtcgagctacagggagacggtgatccggcaggccacggcggcggcg
ggctcggtccatcgagacgacgcacccacttgcggaatttgtcacaagaccaagtttgca
gatggttgcgggagcctgtgttcctattgtcagacaaagttctgcgctcgctgtgggggg
agagtgtccctgcgctccaacacggaggataaagtggttatctgggtgtgcaataactgc
cggaagcagcaggagatcctaaccaagccaggagactggttcagcagtttgtctggaaag
cccgctggcctcggctcggctgtcagcgagccgtctgtgtgccaaacgcccggagacaag
ctccggtctcgttcccaagcacctgcgggttccacctctgctgtccaagaccccagcaga
ctgagcgcgactgggcctgatgtgcggtctctcagcgaaccaccacgagaaaagagaaat
gggcgtggaggagccggccggggggactggcagcctggccagccaaggctccaaacgcag
gtctccatggatcgagatctccggggcgagtccagggaacgcagggaaagtcggcggctg
gcgaaaggacgatccttggagcacgatcctgtgggaggaagtagtagtcggacagaggag
gggggttaccatttagaccatggagggggccctcatcgacaagtagcaacactccctcct
agaggcaggggccatcctgggcccggtctgggtcgtggaatgggcatgggaggggagatg
ggcgatggctctcgagctggacagaggacggtggggggggttggtgcgccgcatgaacac
acagtttctcagcaagcccctccccctgaactcagagaacctccgggtttgggccccggc
tcagttaccagtcaaggacccggagggaaacggactaaacgagagaaggctgagagcatg
ctgcgcaacgattcgcttagctcagaccaatcagaatctcttcggcctcctccaccgcgg
ccctacaaatcgaaacgaggggtgggggctggagggaagaggcaaaccagcgtcagcagt
tcagaagaagagggagggacgacccctgagtacagcagcgccgatgatgctgagatagaa
agtgtcagcgagagaggcgactgggagagctaccctcatgaccccacggtatggcatcat
cctgtaacgtggcagccgtctaaggaaggagaccatctgattgggcgaatcaccctcagc
aagagaagcgccaccatgcctaaagaagctggtgctttgcttgggttgaaggtggtggga
ggtagaatcacggagtcagggagattaggtgccttcatcaccaaagtcaaaaagggaagc
cttgctgacgtagtgggacatctcagagcaggagacgaggttttgcagtggaatgggaag
atgttacctggagccacaatgaaggaggtctataacatcattctggagtctcaagcagag
ccacaagttgagctggtggtgtccagacccattggggtgtatagaaagtatcatgatatc
ccaagaatccccgacacgtcccaccctccattagaatctacaggttccagttcttttgag
tcccagaagatggagagaccatccttaaatgtcctgtctccctccagtcctgggatgctc
caagatgcccctcagttaatgccagggcgactctcagtgaagctgtggtacgacaaagca
ggtcaccagctaatagtcaacgtgctgcaggcagtcgagcttcctcttcggcctgacggg
cggccaagaagcccctacgtcaaaatgtacttcctccctgaccgcagtgacaagagcaaa
cggagaacaaaagccgtgaagaaaacttgcgagcccaaatggaaccagaccttcgtctac
acccacgtccaccggcgggatttccgtaaccacatgctggagctgacgttgtgggaccag
cccaggtcaccggaggaagacagcaccttcatgggagagatcctgatcgagctggagacg
gcgctgctggacgataagcctcactggtatccgctccaaactcacgacgtctcctccatc
ccgctaccccgcccctcccctttcctgcccagacgacacccacagtcggacgcccctgga
aagaagctgcagcgttcccagcgtgttacagagcctgaatttgacgagcgtgcggcagtg
ctgtccaaagcggacgggcggggcagggagaggcagcgggaaccctcgtccaccctggag
gttcctgaggagcaaaggacgccctcccatcacattcgctcccgctccgtctctccacgc
cgggaagaacaggggcgcaaccgatcgcgggcgcccaacgttcctacacagaggagtctg
gatgacgaactttcccacaaccgtcgtactcgctccccaacccgttaccatgacgctgca
agaggctgccaccagggggaggagtacctggacgacagtgaggtcgtcatgatccaccaa
tcaatgcgaggcaaaagtgccgagtgcctgcacaccagtgatctgcagccttctctggac
agggttaagagcgctagcaccaactgtctgactccagacaaacatgtcccctctccaaag
aatgaaagaaaatctctgtccaaatctctgcctcgaagacgtccagcaagtcccaggatt
ctaatccaacatgcttctcctgaagaagacagaatgtggatgctacttcctactcaagag
actttatttcactccagtgcaaagaagaggcagctgcggaccctggagacacctgaatgt
cagactcttggcagaaagctgtctgacagcggcaggggtcacctccaaggcggtgcatgt
ctttccacctcagtaacatcctcagctcgcagagttcgccagctccctcagcttccacct
cagagcagcaccatagaacaagccctggtagcagaggagcgcgttcgccagctccagatg
agggttcattctaaccgcgtgtcagctgctgccacctccagccagcaggacctggaccga
gccctcaagagcaaacgagagctttacaaggaccagcggaggagcagtgaaaacgtttcc
cataagtcctcagacagtgatgtcagcgacgtgtcagccatctctcgaaccagcagtgcc
tctcgcatcagtagcaccagctacatatccatccagtcagaaagaccccgaggacgcttc
agtcgagcggtgcgtgcatcgggacgccacatgatgaagagcaccagcgtgagtggtgag
atctacggcatggagcacgccgacggcagccagtctgacacggcgctcgggagcctgggg
agcgggatcaagaagcggcgctcaagccttagccaacgagttgttgccatcctgccatcg
agacggagtcggagtacctcccagctcagtcaaacagaggcagcaagtaaggaggtcgac
agaaagaaagaggcgtcagcaggtaagaagtctagcaaggctggcagcagcagcatccaa
aggagcgtggagacgggcatggcggtggagtatccgcgcggaggatcggccatgaacagg
caggccagcagggagtccactgatggcagcatgaacagctacagctctgaggggaatttg
atcttctcagggatgcgtttgggggctgacagtcaattcagtgacttcctggatgggtta
ggaccgggtcaacttgttggtcgacaaacattggcaacaccagccatgggtgacgtacag
attgggttgatggataaaaagggccagctggaggtcgaggtgatcagggcccgaggcctt
acccctaaatcaggctccaaatcccttccagccccctacgttaaagtgtacctgctggaa
aatggaacatgtaaagccaaaaagaaaaccaagattgcacgcaagaccctggagccgctc
taccagcagcacctcctctttgatgaaagtccccagggcaaggtgctccaggtgattgta
tggggcgactatggacgcttggaccataaatgtttcatgggtgtagcacagattctgttg
gaggagctggatctctcaagcacggtgattggctggtacaaactgttcccgacatcctcc
ctggtggaccctacactcgctcccctcacacggctggcgtctcagacgtcactggacagc
tcaggacctccaccgggcgtacggtcctag
DBGET
integrated database retrieval system
