Oryzias melastigma (Indian medaka): 112161882 Help Entry 112161882         CDS       T07439                                  Symbol ccdc88ab Name (RefSeq) girdin isoform X9   KO K25392   girdin Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:oml03037]     112161882 (ccdc88ab) Cilium and associated proteins [BR:oml03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    112161882 (ccdc88ab) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N HOOK KASH_CCD DUF4472 Motif Other DBs NCBI-GeneID:  112161882 NCBI-ProteinID:  XP_024153161 LinkDB All DBs Position LG15:complement(1192186..1255122) Genome browser AA seq 1882 aa AA seqDB search MENEVFAPLLEQFMLTPLVCWVRTVGQPKVSDGTKLSEYIELVDGIYLNEIMLEINPKAA VQRTNKKVNNDPTLRIQNLSILIRQIKSYYQESLQQLVMMPLPNVLVLGRNPLSEQGLEE MGKLLLLLLGCAVQCEKKEEYIERIQTLDFETKAAIASHIQEVTHNQENVMDLQWLENGE VPAEDLDNLSRNLAFQLKRLVDERDTQLETIVELTQERDCVQLSPLASCTSQSPGDSPSI RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENVEVELKRLQQDNYQLLS DARSARAYRDELDALREKAIRVDKLESDLCRYKDRLHDIEFYKARVEELKEDNQILLETK TMLEEQLDGSRTRSDKLHLLEKENLQLKSKIHDMEMERDLDRKRMEELLEENLVLEMAQK QSMDESLHLGWELEQLSKTPELTEAPQKSLGEEVNDLTSSRLLKLEKDNQALLKTVEELR GAGSVEAMSKLTKVNQENQKLNQKLERLESELLADRESLRSAESLSTDLMKEKALLEKTL ETLRENSERQLKGLEQENKHLSQTMSSLRQRSQVGAEARVKDVEKENRVLHESICETTAK LNKIEFERKQLRKELEMMKEKGERAEELEIQIQKLERDNESLLKKVASLGITCEKVSSLE TENTELEAEGRRLKKKLDAQKNLAFQLEALEKENSQLEQENLELRRSAESMRSAGAKAAQ LEAENRELESEKSQLKRSLELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIQQL EAELQDMETENQTLQRNLEELKISSKRLEQLEQENKNLEQESSQLEKDKKLLEKENKRLR QQAEIRDSKLEDCNQRISSLEKENRTMGKEMIFFKDSCTRVKELEKENKELVKLGSIDKK TLMTLREELVSEKLRTQQINNDLEKLTHELEKIGLNKDRLLHDESSDDRFKLLESKLEST LKSSLEIKEEKIASLEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVHSSPPKG GKDPQTDSKWAKESHEATRELLKVKDRLIEVERNNATLQAEKVALRSQLKQLETQSSNLQ AQIVALQRQTASLQENNTTLQTQNAKLQVENSTLSSQGAALMAQNAQLQSQQSGVEGERD GALKDKEELRATYELLLRDHEKLAALHERQAAEYEALIGKHGGLKTSHKSLEQQHRDLED KYKQLLQRKGDLEELEKNLRGQQEKMALDKETHEATADQCKTLKEENERLNSSYRQLLKD NENLQLDHKTIKTQLNGAKLEQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ YKFYDPSPPRRRGNWITLKMKKLIKPKSRERMRSLTLTPSHSEFGDAFPTLPMDSQDSSS VGSGSNSLDDTLQQKNSIRRRGQQSHAQGQGSSNAIKRLPFMRNRSKDKDKLKASYRRSM SMNDLLQTMAVASAPGSQWPGSTDNLDDGPAARDAGVVSSSRRGGQRMKELAFSTNAIDC TALTLPTAGRSRAKNRLQVKDNISCEDVAASSDDPKSQGLQGYSSAHALCPPPAEPSALC RVPCGVCSTVNGSLSRPHSESSGEFSLSLDQEVWSSSGSSPVQQPAASRSTHQSPLLARR SLELPGAGNKKGGSPSEVLSLQQFLDEGIDPAESGSQENLTVDSPRLSTSSERAPKERPS TKGRGIMRSSSGRAAPASTDRPQKSLAQPGRPSLRKAESTRVRGSAPLRSSLSSQSKATS VSERLDSASSTLPRASSVISTAEGTTRRTSIHDLLSKDHRQPVSVDASSCSASPKTGVKS QPTPNVEGRQSKSRSGEPQHGC NT seq 5649 nt NT seq  +upstreamnt  +downstreamnt atggaaaacgaggttttcgccccattgctggagcagttcatgctcacacctctggtctgc tgggtgaggacggtggggcagccgaaagtgagcgatggcaccaaattatcagaatacatt gaactggtggatgggatttacctgaacgagattatgctcgagataaaccctaaagccgcc gtgcagcggaccaacaagaaggtcaacaatgaccccacactgcggattcaaaacctttcc atcctcatccgacagattaaatcctattaccaggagagcctccagcagctggtgatgatg cctttgccaaacgtgctggtgctggggcgaaaccctctctctgaacaaggtctggaggag atgggaaaacttctgctgctgcttcttggctgtgctgtacagtgtgagaagaaggaagag tacattgagcggatccagactctggattttgagaccaaagctgccatagcatcccacatc caagaggtgactcacaaccaggagaatgtgatggacctgcagtggttggaaaacggggaa gttcctgctgaagatttggacaacctctctagaaacttggctttccagctgaaacggctg gtggatgaaagggacacacagctggagactattgtggagttaacccaggagagggactgt gtgcagctttccccgctggcctcttgtacatcccagtctcccggagactcgccgagcatc cgaagaacggaaagccgacagcacctttctgtggagctggccgacgccaaggccaaaatc agacgcctacggcaggaactggaggaaaagagcgagcagcttctggacaccaggcaggag ttggagaacgttgaagtggaactcaagagactccagcaggataactatcagctgttatca gatgcgcggtcggctcgggcgtaccgagatgagctggacgcactcagagaaaaagccata cgagtcgacaaactggagagtgatctttgccggtacaaggacagactccatgacatcgag ttctacaaggcccgagtggaggagttaaaggaggataaccaaatattgctggagaccaag accatgctggaagagcagctggatggttccagaacccggtctgacaaacttcatctccta gagaaggagaacctgcagcttaaatccaagattcacgacatggagatggagcgtgatctg gaccgcaagcgcatggaggagctgctcgaggagaacctggtgttggagatggcccagaaa cagagcatggacgagtcgctgcacctgggctgggagctggagcagctgtcaaagacacca gagctgactgaggccccacagaagtctctgggagaagaggtgaacgatctgacctccagt cgcctcctgaaactggagaaagacaatcaggctttactgaagacggtggaggagctgaga ggagccggaagtgtggaagccatgtcgaagctgaccaaagtcaaccaggaaaaccagaaa ctgaaccagaaactggagcgactggagagtgagctgctggccgatagagagtctctccgc agtgcagagtcactcagtacggacttgatgaaggagaaagctttactagaaaagactcta gaaactctaagagaaaactcagagagacagctgaagggcctggagcaggagaacaagcac ctgagccagaccatgtcatccctgcgtcagcgctcccaggtcggagccgaggcccgggtc aaggacgtggagaaagaaaatcgagtccttcacgagtcgatctgcgagacgacggccaaa ctgaataaaatcgagtttgaaaggaagcagctacgtaaggagcttgaaatgatgaaagag aaaggtgaaagagcagaggagctggagattcagatccagaaactggagagggacaacgag agccttctgaaaaaagtcgccagtcttggaatcacctgtgagaaggtgtcatctctggag acggagaacaccgagctggaagctgagggccgccgtctcaaaaagaaactggacgctcag aagaacctggccttccagctggaggctctggaaaaggaaaactctcagttggaacaggaa aacctggagctccggcgctcggccgagagcatgcggtcagcgggggccaaagctgctcag ctggaagccgagaacagggagctggaaagcgagaagagccagctgaagcgcagcttggag ctgctcaaagcctcttctaagaagaccgagagattagaggtgagctaccagggcctagat acggagaaccagcgcctgcagaaagctctggagaacagcagcaagaagatccagcagctg gaggccgaactgcaagacatggaaacggagaatcagacgctgcagcggaacctggaggag ctgaagatctccagcaaacgactcgagcagctcgagcaagagaacaagaatctggagcag gaaagctcccagctggagaaagacaaaaagctcctggagaaggagaacaagcggctgagg cagcaggccgagatccgtgactccaagctggaagactgcaaccagagaatctcctctctt gagaaggagaatcgcaccatgggcaaggagatgattttcttcaaggactcctgcacacga gtcaaagagctggagaaggagaacaaggagctggtcaagctggggagcattgataagaag acactgatgactctcagagaagagcttgtcagtgagaagctccgcactcaacagattaat aatgatctggagaagctgacgcacgagttggagaagattgggctgaacaaagataggctc cttcatgacgagagctcagatgacaggtttaagttgttggagagtaaactggagtcgacc ctgaaatcatctctggagattaaagaggagaaaatcgcctctctggaggccagactgcag gagtcctccaacctcaaccagcaactacggcaggagctgaaaacagtaaagaaaaactac gaggcgttgcgtcagagggaagaggaggagaggatggttcacagctccccccctaaagga ggcaaggacccacaaactgacagtaaatgggcgaaagagagccatgaagccaccagagag ctgctgaaagtgaaggaccgactcatcgaggtggagaggaataatgccactctgcaggca gagaaagtggctttgaggagccagctcaaacaactggaaactcagagctccaacctgcag gctcagatcgtcgccctgcagagacagacggcctctttacaggagaacaacacgactctg cagacccagaatgcaaagctgcaggtggagaactccacgctgagctcacagggtgcagct ctcatggcccagaatgcccagctgcagagccagcagagcggcgtcgagggagagcgagac ggagcacttaaagacaaagaagagctgagagccacttatgagctgctgctccgagatcac gagaagttggcggcgctccacgagaggcaggcggctgaatatgaagctctgatcgggaag cacggcggcctgaagacctcgcacaagagcctggagcaacaacacagagacttggaagac aagtacaaacagcttttgcagagaaaaggagatctggaggagctggagaaaaacctgaga ggacaacaggaaaagatggctcttgataaagagactcacgaggccacagctgaccagtgc aaaacgctcaaagaggagaatgaaagactgaattcaagctatcgtcagctgctgaaggac aacgagaaccttcagctggatcacaagaccataaaaacccagctgaacggcgccaaactg gagcagaccaagctggaagcagagttctctaaactgaaggagcagtaccagcagctggac atcacctccaccaagctcacaaaccagtgtgaattactgagtcaactcaaaggaaacttg gaggaagagaaccgccatctgttggaccaaatccagaccctgatgctacagaaccgcaca cttctggagcaaacgatggagagcaaagacctgttccatgtggagcaaagacaatacatc gataaactaaatgagctgaggaggcaaaaggagaagctggaggagaagattatggaccaa tacaagttttatgacccttcaccaccacgcaggcgtgggaactggatcactctgaagatg aagaaactaataaagccgaagagtcgggagaggatgcgttccctcacgctgactccgtct cactcggaattcggtgacgctttcccgacgcttcccatggacagccaggacagctcatct gtcggctctggctccaactcgctggacgacacgctgcagcagaaaaacagcatcaggagg cgagggcagcagtcccatgcccaagggcaggggtcctccaatgctataaaaaggttgcct ttcatgaggaacagatccaaggacaaagacaagctgaaggccagctaccggcgctccatg tctatgaatgacctgctgcagacgatggcggtggccagcgctccgggttcacagtggccc ggcagcaccgacaatctggacgacgggcctgcagccagagacgctggcgtggtgagcagc agcaggagaggggggcagcgcatgaaggagctcgccttttcaaccaacgccatcgactgc accgccctgaccctgcccaccgcaggacgcagcagagccaagaaccggctgcaggtcaaa gataatatctcttgcgaggatgttgccgcttcttcagacgatcctaagagtcaaggcctg caggggtacagcagcgctcatgctctgtgtcctcctcctgctgagcccagcgctttgtgc agagtgccctgtggcgtctgtagtacggtgaacggcagcctcagccggccacacagtgag agcagcggcgagttcagcctgagcctggaccaggaggtgtggtccagcagcggcagcagc cccgtccagcagcccgccgcctcccgctccacccaccagagccccctgctggcgcgccgc tctctggagctccccggcgccggaaacaagaaaggcggctcccccagcgaggtgctgtcc ctgcagcagttcctggacgagggcatcgatcctgcagagtccgggagtcaggagaacctc acggtggattctccccgcctctccacctcctctgagcgcgctcctaaagagcgcccctcc accaaaggccgggggataatgcgctcctccagcgggagagcggcgccggccagcaccgac cgcccacagaaatcccttgcacagccgggccggccctcgctgaggaaggcggagagcacc cgcgtcagaggctccgcccccctccgctccagcctgtcctcgcaaagcaaagccacgtcg gtctccgaacgcctagactccgcctcctccacgctgccccgagccagcagcgtcatctcc acggccgagggcaccacccgccgcaccagcatccacgacctgctgtccaaggaccaccgc cagcccgtgtccgtggacgcctcctcctgctccgcctcccccaagaccggggtcaagtcc cagccgacacccaatgtggagggcagacagtctaaaagcaggagcggcgagccgcagcac ggctgctaa

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