Oryzias melastigma (Indian medaka): 112161900
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Entry
112161900 CDS
T07439
Name
(RefSeq) cadherin-11
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112161900
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Major cadherins
112161900
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
112161900
NCBI-ProteinID:
XP_024153205
Ensembl:
ENSOMEG00000001478
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All DBs
Position
LG15:complement(10189796..10454698)
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AA seq
817 aa
AA seq
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MAALMIKQQGCGFLRVLLLLLGVSVVCTVAFGTGSRRLDHRNHKHRHPGHSSLHKHRQRT
GKEGQVLHRSKRGWVWNQFFVIEEYTGPDPVLVGRLHSDVDSGDGNIKYILSGEGAGTIF
VIDDRTGNIHATKTLDREEQAQYTLTAQAVARDTNKPLEPPSEFIVKVQDINDNPPEFLH
GPYHARVPEMSNVGTSVIQVTATDADDPTYGNSARLVYSILQGQPYFSVEPQTGIIRTAL
PNMDREARQEYDVVIQAKDMGGHMGGLSGTTEVRITLTDVNDNPPKFPQSVYTMSVSEDK
VPGEEVGRLKAKDPDLEENGLVAYRLIDGDGMNVFELTTDSETREAVIKLKKHVDYETKR
SYSLKVEGSNPHIDSRFLTWGPYKDEATIKISVEDADEPPVFIAPSYTYEVEENALPGTV
VGRVHAKDTDAANNPVSYMIPRYTDVEKFFSISEDGLITTTKPLDRETQAWHNISVSAIE
IGGHHQDAKVRVNIKVKDVNDNSPELASNNEVLMCETVLPGKVIETVSALDKDEMDHRQH
FSFSLAPEVAHNHNFSLTDSRDSTASIYVLRKGFSRLTQDVYFLPIEINDNGFPPLSSTN
TLTIRVCSCDSKDTILSCNVEPYVLPAGLSTGALIAILACIVILLAIVVLFVALRRQKKE
PLIVFEEEDIRENIITYDDEGGGEEDTEAFDIATLQNPDGANGFLPRKDIKPELQFPLRP
GMGRPAANSVDVDDFIKTRIADADSDPTAPPYDSIQIYGYEGRGSLAGSLSSLESVTTES
DLDYDYLQSWGPRFRKLADLYGTKDCSFNDVDDAEDS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgctgatgataaagcagcagggctgtgggttcctgagggtccttctgctgctg
ttgggggtctctgtggtctgcaccgtcgcgttcggaaccgggagtcgcagactggaccac
cggaatcacaaacacagacatccaggtcactcgtcattgcacaaacacagacaaagaaca
ggaaaggaaggacaggttctccacagatccaaacgaggatgggtctggaatcaattcttt
gtcattgaggagtacactggacctgacccagttctggtgggcaggctccactcagacgta
gactcaggtgatggcaacatcaaatacattctgtcaggcgaaggtgccggaacaatcttt
gtgattgatgaccggaccggaaacatccatgctacaaaaacgttggaccgcgaggagcag
gcccagtacaccttaacggcccaggctgtggccagagacaccaataagcccctggagccc
ccctcagagtttatagtgaaggttcaggacattaatgataatccaccagagtttctccac
gggccgtaccatgccagggtgccagagatgtccaatgtaggtacgtcagtaatccaggtg
acagctacagatgctgacgaccccacctacggcaacagcgctcggctggtgtacagtatc
ctgcaaggacagccgtacttttcggtggagccacagacaggtataattcgcaccgctttg
ccaaacatggaccgcgaggccaggcaggagtacgatgtcgtcatccaggccaaagacatg
gggggtcacatgggaggtctatcagggaccacggaggtcagaatcaccctcacagacgtc
aatgacaaccctcccaagttcccacagagtgtatacaccatgtctgtgtccgaggacaaa
gttccaggagaggaggtgggccgtctgaaggctaaagaccctgatctggaagaaaacggc
ctggtggcctatcgcctaatcgatggagatggaatgaacgtctttgaactgaccaccgac
tcagagaccagagaagctgttatcaagctgaagaagcacgtggactatgagacgaagagg
agctactccttaaaggtggagggatccaaccctcacattgactctcgatttctcacttgg
ggaccttacaaggatgaagccacgatcaagatatcagtggaggatgcagatgaacctcct
gtttttatagctcccagttacacttatgaggtagaagagaatgcgcttccgggcactgtg
gtgggacgagttcacgccaaggacaccgatgctgccaacaatcctgtcagctacatgatt
cctcggtacacggatgtggagaagttcttcagcatttcagaagatgggttgatcactaca
acgaaaccactggacagagagacccaggcatggcacaacatatctgtgtcagcaatagag
ataggaggccaccatcaggacgccaaagtgagagttaacatcaaggtgaaggacgtaaat
gacaattcgccagagctggcttctaacaacgaagtcctcatgtgtgaaaccgtgttgccg
ggcaaggtcatcgaaacagtgagtgcgctggacaaagacgagatggatcacagacagcac
ttctccttcagtctcgccccggaagtcgcccacaatcacaacttctccttgacagacagc
agagacagcaccgccagcatctatgtgctccgcaaaggattcagccgtctaacccaggat
gtttacttccttcccatcgagataaacgacaacggtttccctcctttgagcagcaccaac
accctgaccatcagagtgtgttcctgtgacagcaaagacaccatcctctcttgtaacgtg
gagccctacgtcctgcctgctgggctcagcactggtgccctcatagctattctggcctgc
attgtcatcctactcgcaatagtggtgctgtttgtcgctctgaggcgccagaaaaaggag
ccgctgatcgtgtttgaggaggaggacatcagggagaacattatcacttacgatgatgag
ggaggcggtgaagaggacactgaggcgtttgacattgctacactgcagaacccagatggt
gccaacggtttcctgccaaggaaggacatcaaaccagaactccagttccccctcaggccg
ggcatgggtcgacctgcagccaacagcgtcgacgtggacgacttcatcaagacccgcatt
gcagacgccgacagcgacccgaccgcacctccttatgactccattcagatctacggctac
gaaggccgaggatctttggctgggtcgctgagctcgctcgagtctgtcacaacagagtct
gacttggattatgactatctgcagagttgggggccgaggtttaggaagctggcggatttg
tacgggaccaaagactgctcctttaacgatgtggacgatgctgaggactcttaa
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