Oryzias melastigma (Indian medaka): 112161914
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Entry
112161914 CDS
T07439
Symbol
atrnl1a
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oml04091
]
112161914 (atrnl1a)
Lectins [BR:
oml04091
]
C-Type lectins
Others
112161914 (atrnl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
Kelch_5
Kelch_4
EGF_LMN_ATRN
Kelch_6
CUB
EGF_TEN
NANM
PSI
Kelch_2
EGF_Teneurin
PSI_integrin
EGF_laminin
TMEM100
EGF_2
Motif
Other DBs
NCBI-GeneID:
112161914
NCBI-ProteinID:
XP_024153223
Ensembl:
ENSOMEG00000017366
LinkDB
All DBs
Position
LG15:complement(17582748..17897236)
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AA seq
1404 aa
AA seq
DB search
MNEASRRRARTWIYLDVRKSFLGALIFLHLVLRADASAAHKQCDKSCFSGKCVNGTCVCD
HGWDGDQCQHCQGRFKLTDLSGSLTDGPVNYKYKTKCTWLIEGYPNTELRLRFNHFATEC
SWDHMYVFDGDSVYAPLIAVFSGLVVPETRRNESIPEVMTTSGYALLHFFSDAAYNLTGF
NIFYSINSCPNNCSGHGRCSAASSMAGRVYCECEEYWKGEACDIPYCKHNCGSPDHGYCD
LTGEKLCVCNDSWQGPDCTLPVPSTEAFWVLPSVKPSAQSLGRASHRALVHSGLMWVVGG
YSFNYSNYHMVLNYNLDSSTWDAVAAGGGTPLNRYGHSLALYKDDIYMFGGKLEAGAYNI
TDEMWVFNIPGRTWSPRKLGPPPPYAVEGHTAHVVELADGEAVMLVFFGYSPIYSYINKV
QEYNIRSNSWQVVTTGGAVVQGGYGHTSVYEEASGCVYVHGGYKALSSNKYGLVDHLYRY
HVNKKTWLVLRESGLARYLHSAVLLSGAMLVFGGNTHNDTSLSNGAKCFSTDFLAYDIAC
DRWTSLPRPGLHRDANRFGHSAVVSNGSMYIFGGFSGVLLNDVLAYTPPSCRAFLSPASC
FAAGPGVRCLWVDDRCVPWEWTQPLQSVPAPFCPSRPDSSDEECFRFPDCASCTSNTRGC
QWCEDRKCISASSNCTVLTLELAQQHGGALSLSPPPSILSEHQLSLWKHGARRMGHSVKD
ASRCKRREEQECFRLANCRSCSLNINCQWEPQQQECQALPGQLCGEGWQHVGEACLKINS
SRESYDNAQHYCKNLGGNIASLLSDNQVNFVLEELQKHQLQDKSFSPWVGLRKINVSYWG
WEDASPFTNTSLRWLPGEPSDSGFCAYLERAQMAGLKANPCTATTDGLICEKPAGRPQSL
SARPCKTPCALRSSCANCTSQAMECMWCGSTQRCVDSSAYVISFPYGQCLEWQTQDCSAL
NCSGLRTCAECLQRAECGWCGDPSNTGRGVCMEGSYRGPLKPAHPRPGSRDRGRLRDGDM
VVDHSLCSTDRGYNWAFVQCPACQCNGHSKCVNGSVCEFCGNLTAGSHCQSCMPGYYGDP
TNGGKCHACKCNSHANVCQANTGKCFCTTKGVKGDQCQLCDSENRYLGNPLRGTCYYNLL
IDYQFTFSLLQEDDRYYTAINFMATPEQANKNLDMSINASNNFNLNITWSLSSTAGTISG
EEMPIIVRTNIKEHKDSFSCEKFNFKLHHNITFFVYVSNFSWPIKIQIAFSQHNSIMDLV
QFFVTFFSCFLSLLLVAAVVWKVKQTCWASRRREQLMRERQQMASRPFASVAVELEVGGN
QEELLQGVPKPIAMEPCWGSRAGVLTVLLYLPRVPSGIPPPGQSGIAIASALVDTSQQRV
LDFKERGLGLKHRKHIVHHQGTCV
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagcgagcaggcggcgcgcgcgcacctggatctacctggatgtgaggaagagc
ttcctgggagcgctgatctttctccacctggtgctgcgcgcagacgcgtcagcggcgcac
aaacagtgcgacaaaagctgcttttctgggaagtgcgtgaacgggacgtgcgtgtgtgac
cacggctgggacggggatcagtgccagcactgccagggaagattcaagttaacagacctg
tcgggctccctcaccgacggaccagtgaactacaaatacaaaaccaaatgcacttggcta
atcgagggatatccaaacacagaactccggctgcgcttcaatcactttgccactgagtgc
agctgggaccacatgtacgtcttcgacggcgactccgtctatgcccctctgattgccgtc
ttcagcggtctggtggttcctgaaacccgaaggaacgagagcatccctgaagtgatgacg
acatccggctacgctctgctgcacttcttcagcgacgccgcctacaacctcactggcttc
aacatcttctactcgataaactcctgtcctaacaactgttcgggccacggccggtgcagc
gcggcgagctccatggcgggccgcgtgtactgcgagtgcgaggagtactggaagggagag
gcctgcgacatcccgtactgcaaacacaactgcggcagtcccgaccacggctactgcgac
ctgaccggagagaagctgtgcgtctgcaacgacagctggcaaggtccagactgcactctt
cctgtcccctccaccgaggccttctgggtactccccagcgtcaagccgtcggcccagtct
ctgggccgagcgtcccatcgggctctggtgcattctggattgatgtgggtggtggggggc
tattccttcaactactccaactaccacatggtcctgaactacaacctggacagcagcacg
tgggacgcggtggcggccggcggcgggacccccctgaacagatacggacactcactggct
ctttacaaggacgacatctacatgtttggcgggaagctggaagcgggggcgtacaacata
acggatgagatgtgggtgttcaacattcccgggcgcacctggtcgccacggaaactcggc
ccacccccgccctacgctgtggaaggccacacggctcacgtggtggagctcgccgacgga
gaagcggtgatgctggtgttcttcggctactcgcccatctacagctacatcaacaaagtt
caggagtacaacatccgctccaactcgtggcaggtggtgaccaccggcggcgcggtggtc
cagggaggctacggccacaccagcgtgtacgaagaggccagcggctgcgtgtacgtccac
gggggatacaaggcgctcagcagtaacaagtatgggctggtggatcacttgtaccgttac
cacgtcaacaagaaaacatggctggttctcagagagagcggcttggcccggtacctccac
tccgccgtgctgctgagcggcgccatgctggtttttgggggaaacactcacaatgacacg
tctttgagcaacggagccaaatgcttttctactgacttcctggcgtatgacatagcttgt
gacaggtggacatcccttcccagaccggggctgcaccgggacgccaaccggtttggacac
tccgccgtggttagcaacggctccatgtacatcttcgggggcttttcgggagtccttcta
aacgacgtgctggcttacacgccgccgtcctgccgggctttcttaagccccgcctcctgc
tttgctgctgggccgggcgttcgctgcctgtgggtggacgacagatgcgtcccttgggag
tggacacaacctcttcagagtgttcctgctcctttctgcccttcacgacccgacagctcg
gatgaagagtgtttccgcttccccgactgtgcgagctgcacctccaacactcgcggctgt
cagtggtgcgaggacagaaagtgcatctccgcctccagcaactgcactgtgctaactctg
gagctggcccagcagcatggcggcgctctgtctctgtctcctcctccgtccatcttgtct
gaacatcagctgagcttgtggaagcatggagcccggaggatgggacattcggtgaaggac
gcgtccaggtgtaagcgcagggaggagcaggagtgtttccggctggcgaactgcaggagc
tgctccctgaacatcaactgtcagtgggagcctcagcagcaggagtgtcaggccttgcca
ggccagctatgcggggaaggttggcagcatgttggcgaggcctgcctgaagatcaactcc
agcagggagagctatgacaacgcgcagcactactgcaaaaacctgggaggaaacattgcc
tctttgctctcagacaatcaagtcaattttgttctggaggagctacaaaaacatcaactg
caggacaagagcttctctccatgggtgggcctgaggaagatcaacgtgtcgtactggggc
tgggaggacgcctcacccttcacaaacaccagcctgcgatggttgccaggggaaccgagt
gactctggcttttgtgcctacttggagagagcccagatggcgggtctcaaagccaacccc
tgcaccgccacaaccgacggtttgatctgcgaaaaacctgccggaaggccgcagagtctt
agcgctcgtccctgtaagacgccctgcgccctccgcagcagctgcgccaactgcaccagc
caggccatggagtgcatgtggtgtggcagcactcagcgctgcgtggactcctcagcatac
gtcatctcctttccctacggccagtgtctggagtggcagacccaggactgctctgctctg
aactgctcaggtctgcggacgtgtgcggagtgtctgcagagagccgaatgcggctggtgc
ggcgaccccagcaacaccggcaggggcgtgtgcatggagggttcttaccgcgggcccctg
aaacccgcacacccgcggcccggatccagggacagaggcagactgcgagacggggacatg
gtggtggaccacagcctctgctccaccgacagaggctacaactgggccttcgtgcagtgt
cccgcgtgtcagtgtaatggacacagcaagtgcgtaaacggcagcgtgtgcgagttctgt
gggaacctgacggcaggatcgcactgtcagagctgcatgcccggttactatggtgacccc
accaacggaggaaagtgtcacgcttgcaagtgcaacagtcacgccaacgtgtgccaggcc
aacacagggaagtgcttctgtaccaccaaaggggtcaaaggggaccagtgtcagctatgt
gactcagaaaaccgttaccttggtaaccctctcagaggaacctgttattataacctattg
atcgattaccaattcaccttcagtctgctgcaggaggacgaccgctactacaccgccatc
aacttcatggccacacctgaacaggccaacaaaaacctggacatgtccatcaatgcatca
aacaacttcaatctcaacatcacctggtctctcagctcaacagctggaaccatctctggt
gaagagatgcccattatagtgaggaccaacatcaaggaacacaaagacagtttttcatgc
gagaagttcaacttcaagcttcaccacaacatcaccttcttcgtgtacgtgtccaacttc
agttggccaatcaagatccagattgccttctctcagcacaacagcatcatggatctggtc
cagttctttgtcacttttttcagctgcttcctgtcgctgctgctggtcgctgctgtggtg
tggaaagtcaaacagacctgctgggcctcacggcgaagagagcagctgatgagagaacgc
caacagatggccagtcgtccctttgcttcggttgccgtagagctggaggtgggtggcaac
caagaggagctactccagggagtgccgaagcctatagccatggagccgtgctgggggagc
agagcgggcgtcctcaccgtactgctgtacctgcccagagtcccttctggaataccccca
ccaggacagtctggcattgccatagccagcgctctggtggacacatcacagcagcgagtt
ttggactttaaagaaagaggcctggggctaaaacaccgcaagcacattgtgcaccatcaa
ggcacctgtgtgtga
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integrated database retrieval system
