Oryzias melastigma (Indian medaka): 112161941
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Entry
112161941 CDS
T07439
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X2
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112161941
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112161941
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112161941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
LIM_FHL2-3_N
zf-C3HC4_3
KAR9
Motif
Other DBs
NCBI-GeneID:
112161941
NCBI-ProteinID:
XP_024153277
Ensembl:
ENSOMEG00000022787
LinkDB
All DBs
Position
LG15:complement(15712552..15752109)
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AA seq
555 aa
AA seq
DB search
MSSYTVTLPGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQGNLIQGDVIVAIEGVSTEG
MTHLEAQNKIKMANHSLALTMSKSKRPPPMATPRIDSAIPMIPHQQAFSPAANAGFHHGM
LKETTISTHKAIEVTGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQAKGHDAGQYGP
PPVMHQPLQAPPPQQYQQIPQQYQQVPQQYQQVPQQYQQIPQQYQPVPQQYQQSPQHQAP
PTQQSSIQIPVGSGAPKVVSTACIYPSQPAPAQLPPQPHPSAAAPAPPPPASNRPPWVTD
TNFAEKFEASKTTTTTMKVQPLPQAAPPPPAYISNPSPVGPAAPSPAPMTPSPAPFPPVA
RGVAQRAERFAASSRTPLCGACNSVIRGPFLVALGRSWHPEEFNCHYCHVSLADVSFVEE
QNNVYCENCYEEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMED
GEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGHPFYSK
KDKPLCKKHAHAINV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctacacggtgacgctccccggccccgggccctggggcttcaggctgcaggga
gggaaggacttcaacatgccgctgaccatctccaggatcactcctggcagcaaggcggcg
cagggtaacctgatccagggcgacgtcatcgtggccatcgagggcgtcagcaccgaaggc
atgacccacctggaggctcagaacaagatcaagatggccaatcacagcctggcgctcact
atgtcaaagtcaaaacgaccccctccaatggcaactcccagaatagactctgcgattccc
atgatccctcatcagcaggccttctcccctgctgccaacgctggcttccaccacggcatg
ctgaaagaaaccaccatctccacccacaaagccattgaggtgacgggtcctggtggtaag
gccaccatcatccacgcacagtacaacacgcccatcagcatgtactcacaggacgccatt
atggacgccatcgccggccagtcgcaggccaagggccatgacgctggccagtatggccca
ccaccagtcatgcatcagcctctacaggctccgccccctcaacaatatcagcaaatacct
cagcagtaccagcaagtacctcagcagtaccagcaagtacctcagcagtaccagcaaata
ccccagcagtaccagccagttcctcagcagtaccaacagtcgccccaacatcaagccccg
cccacacagcagagctccattcagatccctgttggctctggggcccctaaggttgtcagc
accgcatgcatctacccctcccagcctgctccagcccaactgcccccccaaccccaccct
tcagctgcagccccggccccccctccacctgcctccaacagacccccatgggtgactgac
accaactttgctgaaaagtttgaagccagcaaaaccaccaccaccaccatgaaggtccaa
ccgctgcctcaggcggcccctcccccacccgcatacatctccaacccctctcctgtgggg
cctgcagcccccagcccggcccccatgacccccagccctgccccttttcctcctgtggcg
agaggtgtggcccagagggcggagaggtttgcggccagcagccgtacgccactgtgtggt
gcgtgcaacagcgtcatcaggggccccttccttgtggccctcggccggtcctggcacccc
gaggagtttaactgccactattgccacgtgtctctggcagacgtgagcttcgtggaggag
cagaacaacgtctactgtgagaactgctacgaggagttcttcgcaccaacttgtgcccgc
tgcaacaccaaaatcatgggggaggtgatgcatgccctgcggcagacgtggcacactaca
tgcttcgtgtgcgcagcttgtggcaaaccctttggaaacagccttttccacatggaggac
ggagagccgtactgcgagaaagattacatcgcactcttcagcacgaagtgtcatggctgt
gacttccccgtggaagctggcgacaagttcatcgaagctctgggccacacctggcatgac
acctgcttcgtctgtgcggtctgtcacgtcaatctggagggtcatcctttctactccaag
aaagacaaacctctgtgcaagaagcacgcccacgccatcaacgtgtag
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