KEGG   Oryzias melastigma (Indian medaka): 112161944
Entry
112161944         CDS       T07439                                 
Name
(RefSeq) ubiquitin
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03010  Ribosome
oml04120  Ubiquitin mediated proteolysis
oml04137  Mitophagy - animal
oml04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    112161944
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112161944
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112161944
   04137 Mitophagy - animal
    112161944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:oml03011]
    112161944
   04121 Ubiquitin system [BR:oml04121]
    112161944
Ribosome [BR:oml03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    112161944
  Archaea
    112161944
Ubiquitin system [BR:oml04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   112161944
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 Ubiquitin_5 TBK1_ULD OTU1_UBXL Plexin_RBD UBL_UBAC1 Dsc3_N HATPase_c
Other DBs
NCBI-GeneID: 112161944
NCBI-ProteinID: XP_024153280
LinkDB
Position
LG15:15660983..15662411
AA seq 77 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGN
NT seq 234 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagaccataaccctcgaggttgagccttct
gacaccatcgaaaatgtcaaggctaagattcaggacaaagaaggaatccctcctgaccag
cagaggttgatcttcgctgggaagcagctggaggacggccgcacgctgtccgactacaac
atccagaaggagtccaccctccacctggtgctccgcctgagaggaggaaactaa

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