Oryzias melastigma (Indian medaka): 112161952
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Entry
112161952 CDS
T07439
Symbol
six3a
Name
(RefSeq) homeobox protein SIX3a
KO
K19473
homeobox protein SIX3/6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112161952 (six3a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
112161952 (six3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
112161952
NCBI-ProteinID:
XP_024153288
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Position
LG15:complement(2432055..2435323)
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AA seq
294 aa
AA seq
DB search
MVFRSPLELYPSHFFLPNFADRPLLLANSAPATRSPEDLSMFQLPTLNFSPEQVASVCET
LEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFT
KDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTR
SLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPT
GMRSLSEAGLTPHSSAESPSTAASPTTSVSSMTERVDTGTSILSVTSSDSECDV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggttttcagatcgcctttagagctttatccctcccatttcttcctgcctaacttcgct
gatcgccctctgctcctggcgaacagcgctcccgccaccaggtctccagaagacttgtcc
atgtttcagctaccgaccctcaacttctccccggagcaggtggcaagcgtctgcgagacg
ctggaggagaccggggacatcgagcgactgggccgcttcctctggtccctgccggtggct
ccgggagcatgcgaggcgatcaacaagcacgagtccatcctgcgcgcgcgggccgtcgtg
gctttccacacggggaatttcagagacctctaccacatcctggaaaaccacaagttcacc
aaggactcgcacggcaagctgcaggccatgtggctggaagcgcactatcaggaggccgag
aaacttcgcgggcgtccgctcggaccggtcgataagtaccgggtgcggaagaagtttccg
ctgcctcggaccatctgggacggggagcagaagacgcactgttttaaggagcggacgcgg
agtctgctgagggagtggtaccttcaggacccgtatccaaaccccagcaagaaaagggaa
ctggctcaagccacaggactcactcccacacaagtcgggaactggtttaaaaaccggagg
caacgagacagagcggcggcagccaaaaacaggcttcagcaccaagcaataggaccgacc
ggtatgaggtccctctcagaggccgggctcacccctcacagctcggcggagtcgccctcc
accgcggccagccccaccaccagcgtttccagcatgacagagcgagtcgacaccgggacg
tccatcctgtcggtcacctccagtgactccgagtgcgatgtatga
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