Oryzias melastigma (Indian medaka): 112161979
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Entry
112161979 CDS
T07439
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112161979 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112161979 (pex1)
Membrane trafficking [BR:
oml04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
112161979 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
RNA_helicase
NACHT
AAA_18
AAA_33
TIP49
DUF815
AAA_28
NPHP3_N
ABC_tran
AAA_5
AAA_2
Viral_helicase1
TsaE
AAA_24
RuvB_N
AAA_29
AAA_7
ATPase
ATP-synt_ab
Mg_chelatase
FtsK_SpoIIIE
ORC-CDC6-like
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
112161979
NCBI-ProteinID:
XP_024153334
Ensembl:
ENSOMEG00000008843
UniProt:
A0A3B3DA61
LinkDB
All DBs
Position
LG11:17325101..17334551
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AA seq
1238 aa
AA seq
DB search
MLNNQGIQPVCVVFNNTKNCFIQLPSKLISHLSLNENQALELSRDGGSTVFLSWCPSRTS
SGADGHRVELSRQLGEKLGLTDGEQCFLRPCHQVSSLNQVFVEPLSSDDWEILELHSSAL
EEQLLNQIRVVFQDAVFPVWVNSQTVIYIRIVSLSPHVPFGHLEQFTELVVTPKIGAGIK
SSQNQPFPPRQNPPFSSSSLSSAESSFHVPHSNSPGGIANMKNFLRTLITGTYDSIKELP
PVPDIPVFFPDAIYRVCNAPPDSLCTISHIATGVVHIFPWNPSLIVGKSAVTYGLLSKVQ
SPKEAKEKIKRALEKKNSVPKEQPLSDKRGEDKKREEAMVVRTICHGTEMLTSRERCPSK
GEIYCGKVWIPEPLMSEINIRPHSAVRIKPVKSTIKVAIKLRLQPLNATPEEDDEEIQSM
FLGWLHTKSHEPLARLTPRSGTILLHGNDAKLEIALTVLKPEPQSDPQDQLFLLSPTVLH
KEDIQVNRQPATMPAVNAAAEAPELELPSLHSLGGVGELARVGFEFLSHSFVGNPLSREL
GTAGRGLQGGALLITGAKGSGKSTLSRGLCRKAREDLDSHVEVVDCKKLQGKKVETVRQI
FQDVFEQAEWRQPSVVLLDDLDYLARAPTSPEHDGGPEALLHAHIAQTLRDVVDEVVVRS
SLVCLIITSMSEQSLHPSLTEVQGSHFIQGFVNIQPPDQAQRAAILRHLILRKPLFSEET
LSTLNLTAVAKETEGYTAQDLNVLLERATHANTTRTGRRDRETHLTLTDFEQALKGFVPP
SLWGVDLHVPSGVGLERVGGLKEVRQQLMDTILLPAKFPILFSNLPIRHRSGILLYGAPG
TGKTLMARAVAKDSGMNFISIKGPELLSKYIGASEQAVRDVFQRAQAASPCILFFDEFDS
LAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLY
CPPPDLEARVEILKALSSGLPLAPNVDLEQLAAATEQFTGADLKALLYNAQLEAVHTSAG
PGAPQETTPVSDSDMSLSSMIFLNNSSGSDDSVGEGDQGAGSDLSMVLVESSELRAEDQE
DDNNLWRLYFGSSYESELGNSPISRLCVSGPSVTQDCPGGTLCEPACILPPAYMSSIQTG
YEELSLEELDHLQQKINNIKSSYKRANQESVRTDLSSSQPSLLVSPAHLNAALAVTKASL
SQTDWKKYTKLYEDFNGSADGKVPSSVAFKPGQRATLA
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataaccagggaattcaaccagtatgtgttgtttttaacaacactaaaaactgc
tttattcaacttccgtcaaagctgatatcgcacctttctctgaatgagaatcaggctttg
gagctgtcgagggatggcgggtcgacggtgttcctcagttggtgtcccagcagaacctcc
tccggagcggacggccacagagtggagttgtctcggcagctgggagagaagctcggtttg
acagatggagagcagtgcttcctcagaccatgccatcaagtctcctcactgaatcaggtg
tttgtggagccgctgtcatctgatgactgggagattttggagcttcacagttctgcgctt
gaagagcaactgctgaaccagatccgagtggttttccaagatgctgtgtttcccgtctgg
gtgaacagtcagacggtcatctacataagaatagtttccctctcccctcatgtgcctttt
ggtcatctggagcaattcacagagcttgtagtcactccgaagatcggtgctggcatcaaa
tccagccagaatcagccttttccacctcggcaaaaccctccgttttcttcatcttccctg
tcatcagcagagagttcattccatgtacctcacagtaactccccgggtggcattgctaac
atgaaaaactttctccgcactttaataacgggcacgtatgactcgataaaggagctgcca
cctgtacctgacatcccggttttcttccctgacgctatctacagagtgtgcaatgcacct
ccagactctctctgcaccattagccacattgcgaccggtgttgttcacatatttccatgg
aacccctctttaatagtcggcaagtctgcagtgacatacggcctcctttccaaagttcag
tctcctaaagaagccaaggagaaaatcaagcgggccctagagaagaagaacagcgttcct
aaggaacagcctctttctgacaaaagaggtgaagataaaaagcgagaggaagcgatggtt
gtcaggacgatttgccacggcacagagatgctgactagcagagagagatgccccagtaag
ggggagatttactgtggaaaagtatggatccccgaacctctgatgagcgaaataaacatc
cgacctcactcagctgttcgaataaagcctgtcaaatccaccataaaagtagccatcaaa
ctacgcctgcagcctctaaatgccactcctgaggaggacgatgaagagatccagtccatg
tttctgggttggctgcacacaaagagccacgaacctttggcccgtctgactccacgttct
ggcaccatcctccttcatggaaacgacgccaagttggagattgctttaacggtgctaaaa
ccagagccacagagtgatcctcaggaccaactttttctcctgtcacccactgttctgcac
aaggaagatatacaggtgaacagacagccagcgacgatgccggctgtgaacgctgctgct
gaagcacccgagctggaacttccatctcttcatagtcttggcggggttggtgagcttgct
cgggttggatttgagttcctttcccacagctttgtgggtaatccgctctccagagagctc
ggaacagcaggacggggtctccaaggaggagcgctgcttattactggtgcaaagggaagt
ggaaagagcactctgtccagaggactctgcagaaaagccagagaggatttggactcgcat
gtggaggtggtggactgcaaaaagcttcaaggcaaaaaggttgagacggtgaggcagatt
ttccaggatgtttttgagcaggcagagtggaggcagccttctgttgtcctgcttgatgac
ttggattatttggctcgagccccaacctcacctgaacatgacggcgggcccgaggcgctg
ctgcatgcacacattgcacaaactctaagggacgtggtggatgaagttgtggttcgctcc
agcttggtgtgcctgatcatcaccagcatgagtgaacaatccctccacccgtctctgact
gaggtccagggctctcacttcatccaagggtttgtgaacatccagcctccagaccaggcc
cagcgagctgcgatcctgcggcatctcatcctgagaaaacctctcttttcggaagagacg
ctcagcactctcaacctgacagctgttgccaaggaaacagagggatacacagcccaggat
ctaaatgttttgctggagcgggctacccatgccaacacaacccgaacaggacgccgtgac
cgcgagacgcatttaaccctgacagactttgagcaggctctgaagggattcgttcccccc
tcgctgtggggagtggaccttcacgtgccgagtggagtgggactagagagggtggggggt
ctgaaggaggtgcggcagcagctcatggacaccattctgcttcctgctaagtttcccatc
ctattctccaatcttcccatccgtcatcgctctggaatcctgctctatggagcccctgga
acaggaaaaaccctcatggcgagagctgttgctaaggacagtgggatgaacttcatcagc
atcaagggacctgaacttttgagtaaatacattggagccagtgagcaggcagtccgtgat
gtcttccaaagggctcaagctgccagcccttgcatcctgttctttgacgagtttgactct
ctggcccccaggaggggccacgacagcaccggggttaccgaccgagtggtaaaccagctt
ctgacccagctggatggagtggagggtctgcaaggtgtttacgtgcttgcagccacaagc
cgcccggacctgattgatccagctctgctgagacctggaagacttgacaagtgcctctac
tgccctccccccgacctggaggctcgtgtggagatcctaaaggctctgagctcaggcctc
cctctggctcccaatgtggatctggagcagttggcagcagcgaccgagcagttcaccggt
gcagacctcaaggctctgctctacaacgctcagctagaggctgtccacaccagcgccggg
cccggtgctccacaggagacgacgcccgtctcagacagcgacatgagtctgtcctccatg
atctttctaaacaacagcagtggctccgatgattcggttggggagggagaccaaggcgct
ggctcggacctgtccatggttctggtcgagtccagtgaacttcgagcagaggatcaggaa
gatgacaacaacctttggagactgtacttcggaagttcttatgaatcagagctgggcaat
tcacccatttcaaggctgtgcgtctctggaccctctgtgacacaggactgtcctggagga
acgctctgcgagccggcctgcattctgcctcctgcttacatgtcctccatccagactgga
tatgaggaacttagcctggaggaattggaccacttgcaacaaaaaattaacaacatcaag
agcagctacaaaagagccaatcaggagagtgttcgtacggatttgtcttccagccagcca
agcttgttagtgtctccagctcacctgaacgctgctttggctgtgactaaagcgtctctc
agtcagacggactggaagaaatacacaaaactatatgaagattttaatggatccgctgat
ggaaaagttccttcctctgtggcttttaaaccaggacagcgtgcaactctggcgtaa
DBGET
integrated database retrieval system
