Oryzias melastigma (Indian medaka): 112161983
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Entry
112161983 CDS
T07439
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112161983 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112161983 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112161983 (nfkb2)
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
112161983 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
T3SS_basalb_I
Motif
Other DBs
NCBI-GeneID:
112161983
NCBI-ProteinID:
XP_024153336
Ensembl:
ENSOMEG00000022445
UniProt:
A0A3B3CTY8
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All DBs
Position
LG15:complement(16001450..16016290)
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AA seq
892 aa
AA seq
DB search
MASALRMSEASFINYDNELQLNLMPYDYIPPVDIKTEPYIPETVHGPYIQIIEEPKQRGF
RFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYMGPARVEVQLVTHTDPPRVHAHSLVG
RHCTESGTCVLDIGPNDLTAAFSNLGILHVTKKGVVDVLTRRLREERRRQTGAHCHLTDA
DEASIQKEVKELSKSMDLNIVRLKFTAYLEDSNGGFTRALKPVVSNPIYDSKSPNASNLK
ISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAIV
FKTPPYHSTEIQRSVTVFLQLRRKKAGDSSDPKQFTYIPQVQDKEEVMRKRQKPLPHYEN
WRGTGGGRGGGAGGFGGGATGGGGGGFQFHQQMNGGGGGGGGGAFYSEGFAGFPGAAQMS
SSAPQTSDRPTGSPLQQQLLQIAASLNNRVSQIARQTAAALLQYCRTGDTRALLAIQTHL
CSVQDTNGDTPLHLSIIHLQNGVTQQLIHTLLSSRQQRILNTTNHLQQTPLHLAVITRQP
KVVEALLRAGADPSLPDKDGRSPLHLAALAGDSSLLRLLLSHLGERHGHLVNTPDYHGLQ
PLHLAVRRDGERCLRLLVEGGAKINAPEQKSGNTALHLAVRENLFKVACTLITELKADTN
ACTFGGNTPLHLAASLGSPTLCSMLIAAGADKNIQNDEPLFCSSSSDEEADEPTRVELTE
RAAAQPINTRKRRAGHTPLDLATCHKVRNLLHSGQNPTAGRHGNKKIKANSSSEGGEASG
LNEDTLAQLVEVLSLSDVPWRTLAEKLGMMTLTHLYQDSPTPCHHLLQHYKLGGGAVEVL
VEALRSLGLTEGIRLLRNTELQEDKHSTDATVDSGFSSQPMEEEEQQPAANQ
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgctctgaggatgagcgaagcctccttcatcaactacgacaacgagctgcag
ctcaacctgatgccgtatgactacattcccccggtggacataaagactgaaccctacata
cctgagacagttcacggtccgtacatccagatcatcgaagagcccaaacagaggggtttc
cgcttccgctatgagtgtgagggtccgtcccacggcggcctgccgggggcgtccagcgag
aagaaccggaggacctacccgacggtgaagattaacaactacatgggtccggcccgggtg
gaagtgcagcttgtcacccacaccgacccgcccagagtccacgcccacagcttggtgggg
cgccactgcaccgagagcggcacctgcgtgctggacatcggccccaacgacctcaccgcc
gcgttcagtaatttagggatcctccatgtaaccaagaagggcgtggtcgacgttctgacc
cgaagactgagggaggagaggaggagacaaaccggggcacactgtcaccttacagatgct
gacgaggcctccatccagaaggaggtgaaggagctcagtaagagcatggacctgaacatc
gttcgtctgaagttcaccgcctacctggaggacagtaacggaggcttcacgcgcgcgctc
aaacccgtggtgtccaaccccatttatgacagcaagtcgcccaacgcctccaacctgaag
atctcccgcatggataagacgtgtggctctgtcctcggaggagacgagatcttcctgctg
tgtgacaaagtgcagaaagacgacatcgagatccgcttctacgaggaggacgacgagggc
ggctgggaggcgttcggggacttctctcccaccgacgtgcacaagcagtacgccatcgtg
ttcaagacgccgccgtatcacagcaccgagatccagcgctccgtcaccgtcttcctgcag
ctccggaggaagaaggcgggcgacagcagtgaccccaaacagttcacctacataccacaa
gtccaagacaaagaagaggtgatgaggaagaggcagaagccgctgcctcactatgagaac
tggagaggaacaggaggaggaagagggggaggggctgggggatttgggggaggagctaca
ggaggaggaggaggaggatttcagttccaccagcagatgaacggaggagggggaggagga
ggaggaggagccttttactcagaaggcttcgcaggctttcctggagcagctcagatgtca
agctccgccccccagacgagtgacagaccaacaggctcgccactgcagcagcagctgctt
cagattgccgcgtcgctcaacaaccgcgtgtctcagatcgcccggcagaccgccgccgcc
ctgctgcagtactgccgcaccggcgacacccgcgccctgctcgccatccagactcacctg
tgcagcgtccaggacaccaacggagacacgccgctgcacctgtccatcatccacctgcag
aacggcgtgacgcagcagctcatccacacactgctcagcagccggcagcagcggatcctg
aacacgaccaaccacctgcagcagacccccctacacctggcggtgatcacccgtcaaccg
aaggtggtggaggcgctgctgagggcgggggcggaccccagccttccagacaaagacggt
cgcagccccctccacctggccgcgttggcaggggacagctccttgctccgcctcctgctg
tcccacctgggagaacgccacggccacctggtgaacacgcccgactaccacggtctgcag
ccgctgcacctggccgtgaggagggacggcgagcgctgcctgcgcctgctggtcgagggc
ggggctaagattaacgccccggagcagaagagcgggaacacggcgctccacctggctgtg
agagaaaacctcttcaaagtcgcctgtacactcatcacagagctgaaggcggacaccaac
gcctgcacgtttggaggaaacacgccgctgcaccttgctgccagcctgggctcccccacg
ctctgctccatgctgatcgcagcaggcgcagacaagaacatccagaacgacgagccgctc
ttctgcagctcctcgtcggacgaagaggcggacgaaccaaccagagtggagctgacggaa
cgagccgccgcccagccaatcaacacccgcaagagacgagcgggacacacccctctggac
ctcgccacctgccacaaggtgaggaacctgctgcacagcggccagaatcccacagccggt
cgccacggcaacaagaagatcaaagccaacagcagcagtgaaggcggcgaggcgtcgggg
ctgaacgaggacacgctggcgcagctggtggaggtgctgagcctcagcgacgtgccctgg
aggacgctggcggagaagctgggcatgatgacgctgactcacctgtaccaggacagcccc
accccctgccaccacctgctgcagcactacaagctgggtggcggcgccgtcgaggttctg
gtggaagctctgcggtctctcggtctgacagaaggaatccgcctgctgaggaacacggag
ctgcaggaggacaagcacagcacagacgccacggtcgacagcggcttcagcagccagccc
atggaggaggaggagcaacagccggcagccaatcagtga
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