| Entry |
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| Symbol |
ercc6
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| Name |
(RefSeq) DNA excision repair protein ERCC-6
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| KO |
| K10841 | DNA excision repair protein ERCC-6 |
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| Organism |
oml Oryzias melastigma (Indian medaka)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:oml00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
112162015 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:oml03036]
112162015 (ercc6)
03400 DNA repair and recombination proteins [BR:oml03400]
112162015 (ercc6)
Chromosome and associated proteins [BR:oml03036]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112162015 (ercc6)
DNA repair and recombination proteins [BR:oml03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
112162015 (ercc6)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG15:complement(23143944..23159389)
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| AA seq |
1432 aa
MPAEATEQQASSSLSSPASAALTLGWSEEEGAARGKASCSVPDNTQSSEAAAAYPTSAGA
GDNNGGKRSGALLHIDRQRIQEASASSGADELLGLGVAVYDQDVLEQGVLRQVDEAIQES
SQAAAKAEAEKEYHSVLDDVRSVMVSLKQINKIIEQLSPYAESSKDISRKIESVKRQKEN
KEKQLKKIRAKQKRLQAILGGEDSQRVEAELLAEDDEEDEEPGPSTLGSMLMPAQETEWE
ELIRKGHMTPFGTRIQQKEVKKEPRKLMLAENSAFDQYLADQAKMATERKRVPLLKKKKK
SSSFSSTEGTSSKTTKTVHSSKDKKMKKRMRKLQITALKAHPKARPKAEPQTPKKKRKRH
TEGEETDSEGSEYLPSDELLDPEQEEREAMAEGFGEDDDDDEYELKPYKRKPERWRKKKA
NNDEEYHPGSSDEEEDGSGKVKRYKDDGDVEYYRQRIRRWKRNRLREREERRERGEELSD
DSDAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISFLA
GLSYSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSKK
EKLIPEIASCHGILITSYSAVRNLQDILIRYDWHYIILDEGHKIRNPNAAVTTACKQFHT
PHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTA
YKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQ
ILNGDMQVFSGLIALRKICNHPDLFSGGPRMLKGIPEDQLTEEEHFGFWKRSGKLIVVES
LLRLWFKQGHRVLLFSQSRQMLDILEVFVMENNYSYLKMDGTTTIASRQPLIARFNQDKS
IFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQTMQVTIYRLLTAG
TIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLADPDGSQGTETSAIFAGTG
SDVKVPKKPERPKSTYNYSHSSANQREAAPTRKHSSSEDTPIFKSGRSLPSQGKSSAFTD
SNSINQNGSVEETNIPEENNNKESHRVSTAANNSVLKNNHQHKDLLSSPQKHREKRKHCD
SDEKRKHKKTKRSREARFEGHRISHLVKKRAFKKEEAEENGANDQKKSDDYVLSKLLKKS
GIHSVMQHDTIMESSNPDYVLVEAEANRVAKDALKALKISRQQCRLPYNRPPPPPARKRF
GQKKNSLLVGPSVQSTTTPIKCKDSSIIKKSASKKPGAGAHFSGEGAEGDSNSTPLSSAS
LLAKMRARNHISSLSSRRDDEEEGEDDSEAPGTSSPPAPSTEHDELLVDLRNFVAFQANV
DGQATTQEVLDYFKPRLTQEQVPVFRELLRSICFFHRTSGQEGIWKLKEHFR |
|---|
| NT seq |
4299 nt +upstreamnt +downstreamnt
atgcctgccgaagccaccgagcagcaggcgtcctcctctctgtccagcccagccagtgct
gccctcacgctgggatggtcagaggaggaaggagctgcaaggggcaaagcatcttgctct
gtccctgataacacccagagctccgaggcagctgcagcctatcccaccagcgctggggcc
ggagacaacaatggtggcaagaggtcaggagccttattacacattgaccgacaacggatc
caggaagcctctgccagttctggagctgatgaactcttgggtcttggtgtggccgtttat
gaccaggatgtacttgaacaaggtgtcctgcggcaagtggatgaagcgattcaggagtct
agtcaggctgctgctaaagctgaggctgagaaggagtaccattctgtactggatgatgtg
agatctgttatggtctctttgaagcaaatcaacaagatcatagagcagctgtctccatat
gcagaatccagcaaagatataagtcggaagattgaatctgttaaaaggcaaaaggaaaat
aaggaaaaacagctgaaaaaaatcagggcgaaacagaagcgtcttcaggccatcctggga
ggagaggactctcagcgagtggaagcagaacttttggctgaagatgatgaagaggatgaa
gaacctgggccgtctacactgggcagcatgctcatgccagctcaggagactgaatgggag
gagcttattcggaaaggtcacatgactccttttggaaccagaatacaacagaaagaggta
aagaaggaacctcggaaactgatgttggctgagaactctgcatttgaccagtacctggca
gatcaggccaagatggcaactgagaggaaaagagtccctcttttgaagaagaagaagaaa
agctcatctttcagctctaccgaaggaacaagtagtaaaaccacaaaaacggttcactca
tccaaagacaagaaaatgaagaagcgcatgcgaaagctgcagataaccgctttgaaggcc
catcctaaagctcgacccaaagctgagccccagacgcccaaaaagaagaggaagagacac
acggagggagaggaaacggacagtgagggatcagagtacctgcccagtgatgaactactg
gatccagagcaagaagagagagaagctatggctgagggctttggggaggatgatgatgat
gatgagtatgagctgaaaccttacaagagaaaacctgagcgttggaggaagaagaaggca
aataatgatgaagaatatcaccctgggagttcagatgaagaggaagatggcagtggtaaa
gtgaaaagatataaggacgatggagatgtggagtactacaggcaacgaataaggagatgg
aaacgaaaccgccttcgagaacgggaagagaggagagagagaggcgaagagctgtcggat
gacagcgatgcagagtttgacgaaggcttcaaagttcctggtttcctctggaaaaaactt
tacaagtaccagcagacaggtgtgcgctggatgtgggaacttcattgtcagcaggccggc
ggcatcttgggagacgagatgggattgggcaaaaccatccaggtcatcagctttctggcc
gggctgagctacagcaaactgaggactagagggtccaactacagatatgctggtttgggt
ccaacagttattgtttgtccggctacagtcatgcaccagtgggttaaagagtttcacacc
tggtggccaccgttcagagttgctgttctccatgaaacgggctccttcaccagcaaaaag
gaaaaactgattccagaaatagcctcatgtcacggtatcctcattacctcatattcagct
gtaaggaatctgcaggacatcctaatacgttacgactggcactacatcatactagacgag
ggtcacaagatcaggaatccaaatgctgcagtcactactgcttgcaagcagtttcacact
cctcacaggttcatactgtccggatcaccgatgcagaacaatttgaaggagctgtggtct
ctgttcgacttcgtctttcctgggaaactcgggacgctgcccgtcttcatggagcaattc
tctgtgccaattaccatgggaggatacagcaatgcctcacctgtgcaggtccagacggca
tacaagtgtgcgtgtgtgctgagggacaccataaatccttacctgctcagaagaatgaag
gctgatgtcaaggccaacctctccttacccgacaagaatgagcaggtgctgttttgcaga
ctaacagaggagcagcggcaggtctaccagagcttcttagattccaaagaagtctaccaa
atacttaatggtgacatgcaggtgttctcgggtttgatcgcactgcgtaagatttgtaac
cacccggatctgttctcgggtggccctcggatgctgaagggaatcccagaggaccagctc
acagaggaggaacactttggcttttggaaacgctcagggaaactgatagtggtggagtcc
ctgcttcggctctggttcaaacaaggccacagggttcttctcttctctcagtctagacag
atgctggatatattggaagtatttgtaatggagaacaactactcatacctaaaaatggac
ggaacaaccacgatagcttctcgacagccattgattgctcgcttcaaccaggacaaatcc
attttcattttcttgttgaccactaaagttggaggtctgggagtcaatctgactggagcc
aacagagtcatcatctatgacccagactggaaccccagcacagacacacaggcacgagag
cgagcatggagaatcggtcagacgatgcaagtaacgatctacaggctgctgactgcaggc
accatcgaagagaaaatttaccacaggcaaatctttaaacagtttctgaccaatcgcgtt
ctgaaggatcccaaacaaagacggtttttcaagtctaatgacatctatgaactcttcact
ctggctgacccagatggatctcagggaacagaaaccagtgctatatttgcaggtacgggc
tctgatgtcaaagtgcccaagaaaccagagaggccgaagtccacgtataactattcacac
tcctcagcaaaccaaagggaagctgctccaaccaggaaacactcctcctcagaagacact
cccatcttcaaaagtggccgttccttaccttctcagggaaaatcgagtgcgtttactgac
tccaacagtatcaatcaaaacggttcggttgaagagacaaatattccagaagaaaataat
aacaaagaatctcatagagtcagcactgcagcaaacaactcagtgttgaagaacaatcac
cagcacaaagaccttttaagcagtcctcagaaacaccgggaaaagagaaaacactgtgac
tctgatgagaaacgtaagcataaaaagaccaaacgctcgcgagaggctcggttcgaaggc
caccgcatctctcatctggtgaagaaaagggcttttaagaaagaagaggctgaagaaaac
ggtgcaaacgatcagaagaagtcagatgattatgtcttgtcaaagctcctgaagaaatct
gggatccacagtgtgatgcagcacgacaccatcatggagtcctccaacccggactacgtt
cttgtagaagcagaagccaacagagtggctaaagatgccctcaaagcgcttaagatttcc
cggcagcagtgccgattgccctataacagaccccctcctccacctgcaaggaaacgattt
ggccaaaaaaagaattctctcttagttggaccttctgttcagtctaccaccactcctatc
aaatgcaaggatagttctattataaaaaagtcagcatcaaagaaaccgggtgcaggagct
catttcagtggagaaggagcagagggtgactcaaactccaccccgctatcttcggcttcc
cttctggccaaaatgagagctcgaaatcacataagcagcctctccagtcgcagagacgat
gaagaagagggcgaggacgactctgaagctccaggaaccagctctcctcctgctccatcc
acagagcacgatgagcttttagtcgatctacgcaactttgtcgccttccaggcgaacgtg
gacgggcaggccaccacccaggaagtgctggactatttcaaaccaagactgacacaggaa
caagttcccgtcttcagagagttactcaggagcatctgcttttttcacaggacttctggg
caggagggcatttggaagttaaaagagcactttcgctga |
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