| Entry |
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| Name |
(RefSeq) vinculin isoform X1
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| KO |
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| Organism |
oml Oryzias melastigma (Indian medaka)
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| Pathway |
| oml04810 | Regulation of actin cytoskeleton |
| oml05100 | Bacterial invasion of epithelial cells |
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| Brite |
KEGG Orthology (KO) [BR:oml00001]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112162016
04520 Adherens junction
112162016
09142 Cell motility
04820 Cytoskeleton in muscle cells
112162016
04810 Regulation of actin cytoskeleton
112162016
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112162016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:oml04812]
112162016
04147 Exosome [BR:oml04147]
112162016
Cytoskeleton proteins [BR:oml04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112162016
Exosome [BR:oml04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112162016
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG15:23359429..23383840
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| AA seq |
1135 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSCSKLVQAAQMLKSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVSSMNTIKELLPVLISAIKIFVATKSNRGAGVEEAERNRRFTFEKMSTE
INEIIRVLQLTTWDEDAWANKKDMEALKRSLALIESRMAQAKSWLKDPHGQPGDSGELAL
RVILDEAGKVGELCAGKERKDILATTKALGQMTDQIADLRARGQGPTPGCVQRAGQCSQG
LDLLYGKVDSAARRLEALISAKQAIARRLDAAQAWLADPHGGPEGEENIRALLAEAKRIA
DLCEDPKEREDILRSISEIAGLTTRLAELRKQGKGDTPEARALAKQIGGALLTLQSKTNR
AVANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVECERIQWITGQAAIRGMVGEGKRLA
AGLLGPYRQDMIGRCDRTEGLMGALADMAGRGEAEAPHARATAAQLQDSLKDLRQHMQEV
MTQEVSDVFSDTTTPIKLLAVAATAPADAPNREEVFEERAGNFETHAGRLGATAEKAAAV
GTANKSTVEGIHATVKHARELTPQVTSAARILLRNPGNKAAYEHFDTMKNQWIDNVERLT
GLVDEAIDTKSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKRE
VENSEDPRFRDTVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILAAVGK
VREAFQPQEPDFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKV
GEVLSEPMMVAARQLHDEARKWSSKPEDEEAVEEREVDDEDEFTDGEDDYEPELLMMPSN
QPVNQPILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCA
KDIAKASDEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI
SEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ |
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| NT seq |
3408 nt +upstreamnt +downstreamnt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagata
tcccacctggtcatcatgcacgaggagggggaggtggacggtaaagccatcccggatctg
acggtgccggtggctgcggtgcaggcggcggtcagcaaccttgtccgggtggggaaagaa
acggttcaaacaacagaagaccaagtgatgaagagagacatgcctccagcttttatcaag
gtggagaactcgtgttccaagctcgtccaggcggctcagatgttaaagtccgatccatac
tctgttcctgctcgggattacttgatcgatggatccagagggatcctttctggaacatca
gacctgctgctcaccttcgatgaagcagaggtgcgaaaaataatccgcgtgtgtaaagga
atcctcgagtatctgacggtcgctgaagtggtggagaccatggaggacctcatcacatac
accaaaaacctcggaccagggatgaccaaaatgtcaaagatgattgaggagaggcagcag
gagctgacccaccaggagcacagacaaatgctcgtcagctccatgaacaccataaaggag
ctgctgccggtccttatctcagctataaagatttttgtagcaaccaagagcaatcgtggt
gctggcgtggaggaggcggagaggaacagaaggtttacttttgaaaagatgagcaccgaa
atcaatgagatcattcgagtcttacaactgacaacatgggatgaagatgcctgggccaat
aaaaaggacatggaggctttgaagagatctctggctttgattgagtcaaggatggcacaa
gctaaaagctggctcaaagaccctcatggacaacctggagactctggtgagctggcgctg
cgagtgattctagatgaagctggcaaagtgggagagttgtgtgcaggaaaagagaggaaa
gatattctggcaaccactaaagctcttggacaaatgactgaccagattgcagatctacga
gccagaggtcagggaccaacccccggctgtgtgcagcgtgcaggacagtgctcacagggc
ttagatttgttatatggcaaagtggacagtgctgcacgcagactggaggcattgatcagc
gcaaaacaggccattgctcggaggctggacgctgcacaggcatggctggctgatccacat
gggggtccggagggggaagagaacatcagagccttactggcagaagccaagcgtattgca
gatctatgtgaggaccccaaagagagagaggacatcctgcgctccatcagtgagattgct
gggctcaccaccagacttgcagagctccgtaaacagggtaaaggtgacaccccagaggcc
cgtgcactcgcaaagcagataggaggagcactcctgaccctgcagtccaaaaccaatcgg
gctgtggccaacatgagaccagccaagcctgctgtgaccttggagggaaaaatggagcag
gccctccgctgggtgaacaacccaggtgtcgatgacagaggcgtagagtgtgagaggatt
cagtggattacaggtcaggcagcaatcagagggatggtcggggaaggaaagagactggca
gcaggattgttaggcccgtaccgacaggatatgattggacgctgcgaccgaacagagggg
ctgatgggtgctttagcagacatggctggcaggggggaggctgaggctcctcatgcacga
gcaacagctgcacaacttcaggactccctcaaggacttgagacaacacatgcaggaggtg
atgacccaggaggtatcagatgttttcagtgacaccacgaccccaatcaagctgctggct
gtggctgcaactgctccagccgatgcccccaacagagaagaggtttttgaagagcgtgcg
ggaaactttgagacccatgcaggtcgtttgggagcgacggccgagaaggctgctgctgtg
ggaaccgccaataaaagtacagtagagggcatccatgctacggtgaaacatgccagggag
cttactccacaggtgacctctgcagctcgaattttgctgagaaatcctgggaacaaagca
gcttacgagcatttcgacaccatgaagaatcaatggattgacaatgtggagagactcact
ggtctggtggatgaagcgatcgacaccaaatctctgctagacgcttctgaggaggcaata
aagaaagatattgacaagtgtagggttgccatggcgaatgttcagcctcaaatgcttgtt
gccggggcaacgagcatagcaagacgagctaacagggtcctattagtggccaagagggaa
gttgaaaactcagaggatccgcggttccgagacaccgtaaaacacgcatccgacatcctc
tcacacaccatctcgccaatggtgatggatgccaaagcggtggccgggaacattcaagac
aaagctctacaaaaagcatatttggactcctgtttgaggatcctggctgcagtaggaaaa
gttcgagaagcgtttcaacctcaggaaccagacttccctcctccaccccctgacctggat
cagctccatgtgagtgatgagcaggctccacccaaaccccccttaccagaaggagaggtg
cctccaccccggccccctcctccagaagagaaagatgaggagtttccggagcagaaagtg
ggcgaggttctcagcgagcccatgatggtggcggcgcggcagctgcacgacgaggcacgc
aagtggtcgagcaagcctgaggatgaggaggcagtagaggagagggaggtagatgatgaa
gatgagtttactgatggtgaggatgactatgagccagaactgctgatgatgccatccaac
cagcctgtcaatcaacccattctggcagctgctcagtctctccaccaggaggcgcgcaag
tggtccagcaagggtaacgacatcatagcagcagccaagaggatggctctgctgatggca
gaaatgtctcggctagtgcgcggcgggagcgggaacaaaagagccctgattcagtgcgct
aaggacatcgccaaggcttcagatgaagtgacgagactggccaaagaggtggcaaaacag
tgcactgacagacggatcagaaccaacctgctgcaggtctgtgaacgaatccctaccatc
agtactcagctgaagatcctctcgactgtcaaagccaccatgctgggccgcacaaacatc
agcgaagaggagtcagagcaggccaccgaaatgctggttcacaacgcccaaaacctgatg
cagtcggtgaaggagacggtcagagaagcagaagcagcctccatcaagatccgcacagac
gcgggattcaccctgcgctgggtgcggaaaaccccctggtaccaataa |
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