Oryzias melastigma (Indian medaka): 112162094
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Entry
112162094 CDS
T07439
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112162094
Membrane trafficking [BR:
oml04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112162094
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_3
SH2
RA_2
Lpg0393_VPS9
FERM_f0
Motif
Other DBs
NCBI-GeneID:
112162094
NCBI-ProteinID:
XP_024153512
Ensembl:
ENSOMEG00000001939
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All DBs
Position
LG15:complement(7325239..7350902)
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AA seq
996 aa
AA seq
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MVSLTDGHGNGMTSGGKTAPPQQQGKGHFFKLIDSFAWEIGSLRKEMGEKRKPSDGDQNI
LTLLRLSKEVGALFLQTADRPPALMASDPGYASLQRRLTVLDRVTHTHSVWLLLTLSQQG
AVRILQRQPPGTFLVRKSSSLQRKVICLHTGRDAAAPVREFPIKESQCTFSLEGSTLSFA
DLFRLVAFCCFSRDVLPITLKLPECISSAATLSDLQEVSKTGAGFWDVELHNSRKSSVSP
SGTAIPCRLRPHVQRAISPGGVQAFSLQTRPVSAVDCLQANGALCFFNPLFAKVHQSGGG
TQSTSCIPDATREPLKGGVSITGEGHSCVDSLPVGGEGGRDTSPTWGAPGGPPAPPPSST
AEQPPAHAVGPRSMPGRISWTNSLTEQMERSSSLLPCYSSSDDICSSNPPQKSSPIPILW
PPLSSPPHRASSFQSSSLEEDDSEKTTPRSSVLTDDVVSLDRGALEGSAGGGPRLSDMSF
STDSSDSLSFSQSFSFFIPFLHEPSPPTMADFDTHLPLSLPPPLLPNCSMEEDEEDEDEE
PEYGVSLDSDPDLTVGPAGRSPKQPPSGGALVLQKALRGRLRKMSSVFHSLLTPQKKAVH
RVLELSLDRTSYFGSLVQDFLSFMVDGGGAQAWLSFSSGLELLQTIRQFITQMKMYLRQS
SEMQPPLESLIPEDHIDHVLERAMHKCVLKPLRPMVSAALQDFQVRSGAWQQLKENLSLA
KAQHPQEMGVADMCPPDAVAIEKIRTKLLNMCALYSPEEKVRVLLGACKLIYTLMEDAAG
RLCGADDFLPMLTYILAQCDLPELDNQVLYMMELLDPLLLHGEGGYYLTSTYGALSLIKN
FQEEQAARVLSSETKNTLRQWHRRRTAKRPAPAIEDFQNYLRVALQEWDSGCTAKTLQVR
PHATVEEVCRLCALKFKVLHPERYGLFLVMGGSSQQLGPDTHPQKLKAELHSNSSTAPFH
FVFRRVSLTDQQPLPPCPSLQAPPPCTAQFSESTPT
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcctgacggacggtcacggaaacggcatgacgtcaggaggcaagactgcaccc
ccccagcagcaaggcaaggggcatttctttaagctcatagactcttttgcctgggagatc
ggctctctgaggaaagagatgggagagaagaggaagccttcagatggagaccagaacatc
ctgactctgctgaggctcagtaaggaggtgggggctctgttcctgcagaccgccgaccgt
cccccggcgctcatggcgagtgaccctgggtatgcgtctctgcagcggcgcctcacagtt
ctggaccgagtgacacacacacactccgtgtggttgctgctcaccctcagccagcagggg
gcagtccgaatcctgcagaggcagccccctgggacgttcctggtcaggaagtccagcagc
ctgcagaggaaggtcatctgtctgcacacgggcagagacgccgcggctcctgtcagagag
tttcccatcaaggagagccagtgcaccttctccctggaggggtccaccctgagctttgct
gaccttttccgccttgtggccttctgctgcttcagcagagatgttcttcccatcactctg
aagctgccggagtgcatctcttcagctgcaaccctcagcgatctgcaggaggtttccaaa
acgggcgcaggcttctgggatgttgagctgcataacagcaggaagagctcagtgtctcca
tcagggacagcgatcccctgcagactccgcccacatgtccaaagagccatctctcctggg
ggtgtccaggcattttctcttcaaactcgccctgtgtctgcggtggactgtctccaggcc
aacggggcgctgtgcttcttcaatcctctctttgcaaaggtgcatcagtcaggtgggggc
acacagagcacctcctgcatccctgacgccacacgggaacccttgaaggggggggtcagc
atcacaggagaaggtcactcttgcgtagacagtcttccggttggtggtgaggggggcaga
gacaccagtccaacttggggtgcccctggcggaccccctgcaccccctccctccagcaca
gctgagcagccccccgcccatgccgtaggaccacgaagtatgccgggaaggatttcctgg
actaactccctcacagagcagatggagaggagcagcagcctccttccttgctacagttcc
tcagatgacatctgttcttctaaccccccccaaaaaagctcccccatacccatcttgtgg
ccccccctgtcctcccctccacaccgagccagcagcttccagtcatccagtctggaggag
gatgactcggagaagacgactcccaggtcttcagttttgactgacgacgtggtttctctg
gaccggggggctctggagggatctgctgggggggggccccgcctgagcgatatgagcttc
tcaacagattcttcagactcgctgagtttctcacagtccttctcctttttcatccccttc
ctgcatgagcccagccccccaacaatggcagactttgacacccacctgcccctgtccctc
ccgccccccctcctacctaactgcagcatggaggaagatgaggaagatgaggacgaagag
ccggagtatggcgtgagcctggacagcgatcctgacctgaccgtggggccggcagggcgg
agccccaagcagccccccagtgggggggccctagtcctccagaaggccttgagaggacgt
ctgcgcaagatgagcagtgtgttccactccctgctgaccccccagaagaaggcggtccac
cgggtgctggagctgtccttggacagaacttcctactttggatccctggttcaggacttt
ctgagcttcatggtggacggggggggcgcccaggcgtggttgagcttctcctctggactg
gagctgctgcagaccatccgtcagttcatcacccagatgaagatgtatctgcgacaaagc
tccgagatgcagcccccgctggagagcctcatccctgaggaccacatcgaccacgttctg
gagagagccatgcataagtgcgtgctgaaacctctgaggcccatggtgagcgccgccctg
caggatttccaggtgcgcagcggggcgtggcagcagctgaaggagaacctctccctcgcc
aaggcccagcaccctcaggagatgggggtggctgacatgtgcccccccgatgccgtggcc
atagagaagatccggaccaagctcctcaacatgtgcgcgctgtactccccagaggagaag
gtgagggtgctgctgggcgcctgcaagctcatctacaccctgatggaggacgctgcaggt
cgtctgtgtggcgcggatgacttcctgccgatgctgacctacattctggcccagtgcgac
ctccccgagctggacaaccaggtcctgtacatgatggagctgctggatcccctgctgctg
cacggagaaggggggtactacctgaccagcacctacggagccctgtccctgatcaagaac
ttccaggaggagcaggcggcccgagtcctgagctccgaaaccaagaacacgctcaggcag
tggcaccgccggcgcaccgcaaaacgccccgcccccgccatcgaggacttccagaattac
ctgcgggtggcgctgcaggagtgggacagcggctgcacagccaagactctacaggtgcgg
ccccacgccaccgtggaggaagtgtgtcgactgtgtgccctcaagtttaaggtgctccat
cctgagcgctacgggctgtttttggtcatggggggcagcagtcagcagctggggccggac
acccaccctcaaaagttgaaggctgagctgcacagtaattcatccactgctccatttcac
tttgttttccgccgtgtgtccctcactgatcagcagccgttgcccccctgccctagcctt
caggctccgcccccctgcacagcacagtttagtgagtctacccccacctga
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