Oryzias melastigma (Indian medaka): 112162114 Help Entry 112162114         CDS       T07439                                  Symbol thbs2a Name (RefSeq) thrombospondin-2 isoform X1   KO K04659   thrombospondin 2/3/4/5 Organism oml  Oryzias melastigma (Indian medaka) Pathway oml04145   Phagosome oml04510   Focal adhesion oml04512   ECM-receptor interaction oml04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oml00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     112162114 (thbs2a)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     112162114 (thbs2a)   09144 Cellular community - eukaryotes    04510 Focal adhesion     112162114 (thbs2a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     112162114 (thbs2a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oml04131]     112162114 (thbs2a)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:oml04147]     112162114 (thbs2a)    00536 Glycosaminoglycan binding proteins [BR:oml00536]     112162114 (thbs2a) Membrane trafficking [BR:oml04131]  Endocytosis   Phagocytosis    Opsonins     112162114 (thbs2a) Exosome [BR:oml04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    112162114 (thbs2a)   Exosomal proteins of colorectal cancer cells    112162114 (thbs2a)   Exosomal proteins of bladder cancer cells    112162114 (thbs2a) Glycosaminoglycan binding proteins [BR:oml00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    112162114 (thbs2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS EGF_3 TSP1_CFP_C TSP1_CCN Laminin_G_3 cEGF EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  112162114 NCBI-ProteinID:  XP_024153541 Ensembl:  ENSOMEG00000001451 LinkDB All DBs Position LG15:complement(24717942..24735011) Genome browser AA seq 1184 aa AA seqDB search MKLWRSLFLLFLSVFHQATSQDEEQLDETSFDLFEISRITRKTLGAKQFRGQNLDAPAYR FIRFDYLPPVDPPILKQILEQIQNNEGFVFVASMRQDRTSRGTLVALEGPGDRRQFEIIS NGPANTLDLVYWMDGSQNVVSFEDVDLADSQWKNITLHINGENANLFVGCHLIDSFVLDE PFYEHLRAEGSRMYVAKGSNRENHFRGLLQSVRFIFDTPVENVLQGRGCEVIKQDDPNIV RESTEVIDVSPSITTNVIGQKTDDLGSDMCERSCEELSTMFHELKGLRVVVSNLIDGLQK VTEENTVMKEALGRMKETKEKNMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCP PVACASPSFVDGECCPVCMPMDSEDGWSPWSEWTECTVTCGIGTQQRGRSCDATSNPCTG PSIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDCE GSGRETQSCTAKPCPIDGGWGPWSPWASCSATCGGGIKSRTRECNSPQPQHGGKKCLGEA SDSDTCNKEDCPIDGCLSNPCFAGVDCSSSPDGSWECGPCPAGFRGNGTHCDDINECDLV SDVCYKVSGTQRCVNTDPGFHCLPCPKRYKGTQPFGMGVEAAKTNKQVCEPENPCKDKTH SCHKFAECIYISHFSDPMYKCECRTGYAGDGFICGEDSDLDGWPNQNLVCGANTTYNCKK DNCPDLPNSGQEDLDRDGQGDACDKDDDNDGIQDERDNCPLLYNPRQFDFDKDEVGDRCD NCPYEDNPAQIDTDHNGEGDACAVDIDGDDIHNDNDNCPYVYNTDQKDTDMDGVGDQCDN CPLLHNPDQSDMDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANANQADHDKDGKGDACD YDDDNDGVPDDKDNCRLTPNADQVDSDGDGRGDACKDDFDNDSIPDILDVCPENNAISVT DFRKFQMVHLDPKGTTQIDPNWVVKHQGKELVQTANSDPGIAVGFDEFSAVDFSGTMYVN TDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGEN LRNALWHTGNTQGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADS GPIYDKTFAGGRLGLFVFSQEMVFFSDLKYECRDKPEFPTVFTR NT seq 3555 nt NT seq  +upstreamnt  +downstreamnt atgaaactgtggagaagtctctttttgttgtttttatctgtgttccatcaagcaacatct caagatgaagaacagttggatgagacatcatttgacttatttgaaatcagtcgtatcaca cgcaagactctgggggccaaacaatttcggggccaaaatttagatgctcctgcctaccgc ttcatccgctttgactatctgcctccagtagacccccccatactcaaacaaatcctggaa cagatccagaacaatgagggctttgtctttgtggccagcatgcggcaggatcgcacctca cggggcactctggtggctctggagggtcctggtgacaggcgacagttcgagatcatatcc aatggaccggccaacactctggatctggtgtactggatggatggctctcagaacgtggtc tcattcgaggatgtggacctagctgactctcagtggaaaaatatcacccttcacattaat ggggagaacgcaaacctttttgtgggctgccacctgatagacagctttgtcctggatgag ccgttctatgagcacctgcgggctgaagggagtcgcatgtatgtcgcaaagggatccaac cgagaaaaccactttaggggccttcttcaaagtgtacgtttcatctttgacacgccggtg gaaaacgttctccagggcagaggctgtgaggtcataaagcaagatgatcccaacattgtg agagagagcactgaagtgatagacgtgagcccctccatcaccaccaacgtcataggtcag aagacggacgaccttggctcggatatgtgcgaacgctcctgtgaggaacttagcaccatg ttccacgagctgaaaggactgcgtgttgttgttagtaacctcatcgacggtttgcaaaaa gtgacagaggagaacacggtcatgaaggaggccctcgggagaatgaaagagactaaggag aaaaacatgtgctggcaggatggtcgcctgtttgaggataaggaagactgggttgtagac agctgcaccaaatgtacctgccaggagtccaagattgtgtgtcatcaaattacatgtcct cccgtggcctgtgctagcccctcatttgttgatggcgaatgctgtcccgtgtgcatgcca atggacagtgaagatggctggtccccgtggtcagagtggacagagtgcaccgtcacctgt gggataggaactcaacagaggggtcggtcttgcgacgctaccagcaacccttgcaccgga ccttcaatccagactcggaagtgcagcctgggcaaatgtgatagccgtgttcgtcaagac ggagggtggagtttgtggtcgccatggtcgtcttgctccgtgacgtgtggggaaggacaa atcaccaggatacgccactgcaatgctcctgtgcctcagctggggggcaaagactgtgag ggcagcggaagggagactcagagctgcactgccaagccatgtccgattgatggtggatgg gggccgtggtccccatgggctagctgttctgcaacctgtggaggaggcataaagagtcgt acacgtgagtgcaacagccctcaacctcagcacggcggcaagaagtgccttggggaagcg agtgacagtgacacttgtaacaaggaggactgtcctattgatgggtgcctgtctaacccc tgctttgctggagtggactgcagcagctctccagacgggtcttgggagtgtggtccatgc ccggctggttttcgtggaaatggtacccattgtgatgacattaacgagtgtgaccttgtg tctgacgtttgctacaaagtaagtggaacacagcgatgtgtcaacaccgatccaggtttc cactgcctgccctgtccaaagcgatacaaggggacccagccttttggcatgggtgtggag gctgccaagacaaacaaacaagtttgtgagccagagaatccatgcaaagacaaaacccac agctgtcacaaattcgcagaatgcatttacattagccatttcagtgacccgatgtacaag tgtgagtgtcgaaccggttatgccggggacggcttcatttgcggcgaagactcagacttg gacggatggcccaatcagaaccttgtgtgtggagccaacaccacctacaactgcaagaag gataactgtcctgatttaccaaattctggacaagaggacttagacagagatggccaagga gacgcttgtgataaggatgatgataatgatggaatccaggatgaaagggacaactgccct ctcctctacaatccacgtcagtttgattttgacaaggatgaagttggtgaccgctgtgac aactgcccgtatgaagacaatccggcacagattgataccgatcacaatggagaaggagac gcctgtgcagtggacattgatggcgatgatattcataatgacaatgacaactgcccctat gtttacaacactgaccagaaggacacagacatggatggagttggtgaccagtgcgacaac tgtccattgcttcacaaccctgaccagtcggatatggacaatgacctggttggtgaccag tgtgacaataatcaggacattgatgaagatggtcaccagaacaacttggacaattgtccg tatgtggccaacgccaaccaggctgaccatgacaaggatggcaaaggagacgcatgcgac tacgatgacgataatgatggcgttcctgacgacaaagataattgtagactcacacccaat gcagaccaggtggattctgatggtgatggaagaggggatgcctgcaaagacgactttgac aacgacagcatcccagatatcctagatgtttgtccggagaacaatgccatcagtgtgaca gattttaggaagttccagatggtccacttggatccgaagggaaccactcaaattgatccc aactgggtggtaaaacaccaaggcaaagagctagttcagactgccaactctgatccagga attgcagtaggttttgatgaattcagcgccgtggacttcagtggaaccatgtatgtaaac acagacagagatgatgactatgctggctttgtgttcggataccagtcgagtgggcgtttt tatgtggtgatgtggaagcagatcacccagacctactgggaggacaagccatccaaggct tttggcatctcaggcgtttcgcttaaggttgtcaactcaaccacaggcactggagaaaac ctaagaaatgctttatggcacacaggcaacactcaaggacaggtgcgcactctgtggcat gacccaaaaaacattggttggaaggattacacggcatacaggtggcatctcatccacaga ccaaagactggttttataagggttgtggtctatgaaggcaaacagatcatggctgactcg ggacccatttacgataagacttttgcaggagggaggttaggcttgtttgtcttttcgcag gagatggttttcttttccgacctcaaatatgaatgcagagataagccggagttccctaca gtgttcacaagataa

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