Oryzias melastigma (Indian medaka): 112162164
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Entry
112162164 CDS
T07439
Symbol
gdf6b
Name
(RefSeq) growth/differentiation factor 6-B
KO
K20012
growth differentiation factor 6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04060
Cytokine-cytokine receptor interaction
oml04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112162164 (gdf6b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112162164 (gdf6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112162164 (gdf6b)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Transforming growth factors (RSTK binding)
112162164 (gdf6b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
112162164
NCBI-ProteinID:
XP_024153637
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Position
LG11:complement(14019643..14022502)
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AA seq
414 aa
AA seq
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MRLQSPGPSSGFGSDVRMDSCHVSLLLFVWAIPGFRSVYPPSVQRSNTVAEFLDASEYLK
DFHSSSSLNFRRASKESVQPHDYMLSIYKTFSTAEKLGLNASFFSSSKAANTVTSFVDSG
QDDLPLSPLRRQQYLFDVSSLPKKAEVLGTELRIYTKVSGNFQIPETDPIDIQLLSCHDK
QLLGSKTLDLQDSSGPTWKVLDVLKIFKEHRGKRFCLELRAVLDKPERELDLHHLGLHRH
GRPQLKKAILVVFTRSKMRQNLFSERREGRALLDLHMRTKERGPGTTASRKRRRAAPRSR
HGKRHGRRSKSRCSKKPLHVNFRELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHA
IIQTLMNSMNPSNMPPSCCAPSKLSPISILYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcagtcccccggtcccagctccggtttcggctcagacgtgaggatggactcc
tgtcacgtctccctgctgctgttcgtgtgggcgatccccggtttccggtccgtttacccc
ccatctgtccagaggagcaacacggtggcggagttcctggacgcgtccgaatatttaaaa
gactttcactcgtcttcttccctaaacttcagacgtgcatccaaagagtcggtgcagcct
cacgactacatgctgtcgatttataaaaccttctccacagcggagaaactgggactcaac
gccagctttttcagctcctcaaaggctgcaaacactgtcacaagttttgtggacagtggg
caagatgacctcccactctcccctctgaggagacagcagtatctgttcgatgtttcaagc
cttcctaaaaaagcagaggtgttgggaacagagctcaggatatacaccaaagtgtctggg
aatttccagattccggaaacggatcctattgacatccagctcctctcctgccacgataag
cagctgctcggctccaaaaccctggacctgcaggactccagcggcccgacgtggaaggtg
ttggatgtgttgaaaatattcaaagagcaccgggggaagcgcttctgtctggagctgaga
gccgtgctggacaagcctgagagagaactggacctgcaccatttgggcctgcaccggcac
gggaggcctcagctgaagaaagccatcctcgtggtcttcaccaggtccaagatgaggcag
aacctcttcagtgagaggagagagggcagagcactgctggacctccacatgaggacaaaa
gaaaggggccccggcaccaccgccagcaggaaacgcaggagggcggcgccccggagccgc
cacgggaagaggcacggcaggaggtccaagtccaggtgcagcaagaagccgctgcacgtc
aacttccgagaactgggctgggacgactggatcattgcccctctggattatgaagcctac
cactgcgagggtgtgtgtgacttccctctgcgctcgcacctggagcccacaaaccacgcc
atcatccagactctgatgaattcaatgaaccccagcaacatgccccccagctgctgcgcc
ccgtccaaactcagccccatcagcatcctgtacatcgactcagggaacaatgtggtctac
aagcagtacgaggacatggtggtggagtcctgcggatgcaggtag
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