Oryzias melastigma (Indian medaka): 112162169
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Entry
112162169 CDS
T07439
Name
(RefSeq) muscular LMNA-interacting protein
KO
K27832
muscular LMNA-interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112162169
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
112162169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MLIP
Motif
Other DBs
NCBI-GeneID:
112162169
NCBI-ProteinID:
XP_024153644
Ensembl:
ENSOMEG00000001960
LinkDB
All DBs
Position
LG15:23563431..23587785
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AA seq
816 aa
AA seq
DB search
MSARKVAAGNPDKSTTFTFVPEVHRLPAQVIFTAEDASKALAVKSDKNPVGSHERNMWET
MPEREIFKAERVVIKDSVEEGARHIIQLDTQPRLKSSPGHKIFSQIKASPPVSSWSENTS
NHVASDVVSMETGVDKHKDVHRAQVSSGCSENRASEDRVSPTNSADLFPTPTSSRESILS
ECWDKEKSWFQPSSATSPYSFSRTVSPCSSVRSGAFTPSVIQIKKHFLAPGSSLVNIPQT
CFSSCDSLSSSVCAQTPPLRHRPPLTRLSLLTAILRKGRLPVLSTAQERPYTPCWPVNLV
SLSFCNACSAASSVASIPLQLSSQFSSSTSIDSQNQIHSKNCVTASDRRWPKMERRSEQI
CPSSELRREQVIPLPPVRNGTFPRTPLPLLSNFNSASPPKHDNSDFVASAYSSFSKHSNP
HADPKPKELISTPSKLYNEEIKRTPQSQSSLSKLRLLSQRLKSPPVSPHPPNSIPASPTP
PLQNTTHTSSVGACESDQRFPAVRSITPSQAFRKAHCLPPSRYATVALPGWQSPISPSTP
TPSLAPPVRNLTTSPSLSLRSTPSPRPGSGISDCSDGEGKKRKTLKIKSSYKSLAAIPTN
NLLLDQQAIDEQVEKNQSRLLDRAVTDTHAEMCSPAQLRQQSEELYAVIDEILADSSPVI
SKTSKTNAGIQHKTQSFQKSLGRETKYASVCSLYPSTDKSRTLVNSKKTKPGIVRPMTAI
PRLSVKDEDVSHSRPFRKLFTETSPIKKKEGKPSFNEAKTNFYNGSNGKLLMEKRWPEKS
QFSVCELHIKEPDEISHPRKGTSAPFSRMEELQIRV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaggaaggttgcagcaggaaacccagataaatctactactttcacatttgta
ccagaggtgcacagattacctgctcaagtcatttttaccgcggaggatgcgtccaaagct
ctggctgtaaaatcagataagaacccagttgggtcccacgagaggaatatgtgggagacc
atgccggaacgagagatttttaaagccgagagagtcgttatcaaggactccgtagaagaa
ggagcgagacacattatccagctggatacacaaccccgattgaagtccagtccgggtcat
aagatcttctctcaaatcaaagcctcgcctccagtcagctcttggtctgaaaatacatcc
aaccacgtagcctctgatgtggtctccatggaaacgggtgttgacaaacacaaggatgtt
caccgcgctcaagtcagctcgggttgctctgagaacagagcgtcagaggacagggtgagc
cccacaaactctgcagacttgttccccaccccgacgtcctccagagagtccatcctctcg
gagtgttgggacaaagaaaaaagctggtttcagccttcgtctgccacctctccatactct
ttcagccgcacagtgtctccctgctcctctgtccgctctggagccttcactccttctgtt
atccagatcaagaagcactttcttgctccaggctccagtctagttaacatccctcagact
tgtttctcatcttgtgatagcctgtcgtcgtctgtgtgtgcgcagacaccgcctctccga
caccggcctcctctcacccgactttccctcctcactgccatcctcaggaaaggtcggctc
cctgtcttgtccacggcacaggagaggccgtacaccccgtgctggcctgtcaaccttgtg
agcctgtctttctgtaacgcgtgctcagctgcctccagtgtggcctccatccccctccag
ctttcctctcagttctcctcctccacctcaattgacagtcaaaaccaaattcacagcaaa
aactgtgtcacagcctcagacagaagatggcctaagatggaaagacgttcagagcaaatt
tgcccaagcagtgagctcaggcgggagcaagttattccgcttccacccgtgaggaacggc
acgttcccccgaactcctctgcctctgttatcaaacttcaattctgcctctccaccaaag
catgacaattcagattttgttgcctcagcttacagctccttttccaagcatagcaaccca
cacgcagatcccaaacctaaagaactcatctccaccccctccaaactttataacgaggaa
attaaacggacacctcaatcacagtcctccctctcaaagcttcgcttgctgtctcagcga
ctgaaatctccacctgtttcccctcatcctccgaattcaatcccagcatctcccactcct
cctttacaaaacacgactcacacctccagtgtgggggcgtgtgagtcagaccagagattt
cctgctgtcagaagtatcacaccttcacaggccttccgtaaagcccactgcctgccccct
tcccgctacgcaacagttgccctgcctggatggcagtctcccatcagcccctccactccc
acaccctctctggctccaccagtccgaaacctcaccacgtccccttctctgtccctgaga
tccaccccctccccaaggccggggagtggaatttcagactgcagtgacggcgagggtaaa
aaaagaaagacactcaaaattaagtcaagctacaaatcgctggctgcaattcctacaaac
aaccttcttttggatcagcaagcgatagatgagcaggtagagaagaaccagagtcggctc
ctggacagagctgtcactgacacacacgcagagatgtgctctccagctcaacttcgacaa
cagtcagaggagctttatgcagtaattgatgagatcctggcagattccagtcctgttatc
tcaaagacatcaaaaaccaacgctggtattcagcataaaactcaatcatttcaaaaatcc
ttggggcgtgaaacaaaatatgcatccgtgtgcagcctttatccatccaccgacaagtca
agaaccctggtgaattctaagaagacaaaacctggaatagttcgcccaatgacagccatt
ccccggttatcagtgaaggacgaagatgtctctcactcaagacccttccggaagcttttc
actgagacttcacccatcaagaagaaggagggaaaaccaagtttcaatgaggcaaagaca
aatttctacaatggctcaaacggaaagttgctgatggagaagagatggcctgaaaaaagt
caattttcagtgtgtgagcttcatatcaaagagcctgatgagatcagccacccaaggaaa
ggaacttcagcgcccttcagtcgaatggaagagttacaaattcgtgtttaa
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