KEGG   Oryzias melastigma (Indian medaka): 112162199
Entry
112162199         CDS       T07439                                 
Name
(RefSeq) protein bicaudal C homolog 1 isoform X2
  KO
K18756  protein bicaudal C
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112162199
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112162199
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_GLD-3_3rd SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 112162199
NCBI-ProteinID: XP_024153697
Ensembl: ENSOMEG00000009659
LinkDB
Position
LG15:5198947..5289856
AA seq 969 aa
MAAQCDGLSGYLQQSDQGSNSERSADSPLPGSEEDLGGPLQLPDPEWTEERFRVDRKKLE
VMLLAASEGRVNGGEDFFQKIMDETQTQIAWPSKLKIGAKSKKDPHIKVCGKRENVREAK
DRIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKRVMEETGCHIHFPDSNRNNQAEK
SNQVSIAGQPGGVEAARVKIRELLPLVLSFELPAIMQADPSSPTVQHISQTYNLTVSFKP
PTRLYRATGVVRGSQNNSNAVKRGTALLLEHLAGSLASTVSVTTHLDIAPQHHLFMKGRN
GSNIKHITQRTGAQIHFPDPNGPQKKSTVYIQGTIESVCLARQYLMGCLPLVLMFDIKED
VEVEPQCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKFLLGLESNGVS
SSSPAGALNPPTNGPSPSLICPVSLDILTSAGLGLSKLGFLGATAPHSMANSAIPNAVLN
SLNSSLSPLQTPSPSNPAPSPSLWPSSLAGTQSFSSQLIVHPATQATLSTILLSGVQGYT
HSTTSPPPGLAPIDKPPNGVPDCALNGHVKHPGSVYGRLPTAALADAVLSPAPCDPVQEA
SGHNPSEPLSSKSNSDEGSDTFVEVGMPRSPSHSANGNELKQMLASCKTASGKRQAVELL
QGTKNSHLHSDCLLSDGKSSSSDGPVADKKAPGSERAAERAAQQNERIRLTPQSSFANMQ
AFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANHVSYKPSM
TTTYEGSPLSLSRSGSREGIGNGSESENWRERNGSGNGLPNHADFPSCVSSPKRKQNKSA
TEHYLSSSNYMDSISSVTGSNGCSLNSSLKGSDLPELFSKLGLGKYTDVFQQQEIDLQTF
LTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPPIRSSFLEGGASGRLSRQFHS
DIASVSGRW
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggccgctcagtgcgacggcttaagcggatacttgcagcagtcggaccagggctccaac
agcgagcgcagcgccgactcgcccctaccggggtcggaggaggacctcggcgggcccctg
cagctgccggacccggagtggacggaggagaggtttcgggtggaccgcaagaagctggaa
gtcatgttgttagctgcctctgaggggagagtcaacgggggagaggacttcttccagaag
atcatggatgaaacccaaacccagatagcgtggccttccaaactcaaaattggagccaag
tccaaaaaagatcctcatatcaaggtgtgcgggaaaagagagaacgtgcgagaagcgaaa
gacagaattatgtctgtccttgacacaaagagcaacagggtgactttgaagatggacgtc
tcccacacagaacactcccatgtgatcggcaaaggtggcaacaacatcaagagggtgatg
gaggagacgggctgccacatccatttcccagactccaacaggaacaaccaggcggaaaag
agcaaccaggtgtccatcgcgggacagccaggaggggtggaggcggctcgagtgaaaata
agggagctgctgcctcttgtgttgtcctttgagctcccggccatcatgcaggctgacccc
agctcccccaccgtgcagcacatctcccagacctacaacctcaccgtttccttcaaaccc
ccaacgcggctctacagggccaccggtgttgttcggggctcccagaataacagcaacgct
gtcaagcgaggcaccgctctgctgctggagcacctggccggtagcctggcgagcaccgtc
tccgtcaccacccacctggacatcgcaccccaacaccacctcttcatgaagggccgcaac
ggcagcaacatcaagcacatcacccagcggaccggagcccagattcacttccccgacccc
aacggcccccagaagaagtccaccgtctacatccagggcaccatcgagtccgtgtgcctg
gcgcggcagtacctcatgggctgcttgcctctggtgttaatgtttgacatcaaagaggac
gtggaggtggagcctcagtgcatcacggcgctgatggagcagctggacgtcttcatcagc
attaagccaaaaccaaagcagcccagcaagtcggtgatagtgaagagcgtggaaaggaat
gccgtcaacatgtacgaagcgcgaaaattcctcctgggcctggagagcaacggcgtgtcg
tcgtcctcccccgccggggcgctgaacccccccactaacggtccgtccccgtcactcatc
tgccccgtcagcctggacatcctgacctcagctggactggggctgagcaaactgggtttc
ctgggtgcaacagccccccactccatggcgaactccgccattcccaacgctgtcctgaac
agcttgaactcctctctgagcccccttcagaccccgagtcccagcaacccggcgccgtcc
ccctccctgtggcccagctcgctcgccggcacccagagcttttcatctcagctgattgtg
caccctgccactcaggccacgctcagcaccatcctgctgtcaggagttcagggttacaca
cacagcacgacatctcctccccccggcctcgcccccatcgacaagccgcccaacggggtc
cctgactgcgccctcaacggacacgtcaagcacccgggttctgtctatgggaggttacca
acagcagcactcgcagacgcggttctgagtccagcgccatgcgacccggtccaggaagcc
agcgggcacaatccatcagaaccactctccagcaagtccaattcagatgaaggctccgat
acgttcgtggaggtgggcatgcccaggagcccctctcactcggccaacggcaatgagctg
aaacagatgctggcttcgtgtaagacggcgtcagggaagcgacaggctgtggagctcctg
caagggaccaagaactcccatctacattctgactgcctcctgtctgatgggaagtccagc
tcctcagacggtcctgtggcagataagaaggctccaggcagcgagcgagctgctgagagg
gctgctcagcaaaacgagagaatccgactcacaccacagtcttcttttgctaacatgcag
gcatttgattatgagcagaaaaagctgttggcaacaaaagctatgctaaagaaacctgtg
gtgactgaggttcgaacccccaccaacacatggagtgggctgggcttctccaagtccatg
ccggctgaaaccatcaaggagttacggagagccaatcacgtctcatataaacccagcatg
accaccacctacgagggttccccgctgtctctgtctcggtctggcagtcgggaaggcatc
gggaacggcagtgaatcggaaaactggagggagagaaacggctccggtaacggccttccg
aaccacgccgacttcccctcgtgtgtcagcagtcccaaacggaagcagaacaaatctgcg
acggagcattacctcagcagtagcaactacatggactccatttcttctgtaactggaagc
aacggctgcagcctgaactcgtccctgaaaggctccgacctgccagaacttttcagcaag
ctgggtttggggaaatacacagacgtcttccagcaacaagagattgacctccagacgttc
ctgactctcacagaccaggacctcaaggaactgggaatcaccacctttggggcccgcaga
aaaatgctgcttgctatttcggagctaaacaagaacaggaggaagctatttgagccaccc
atcaggtcctccttcctggagggaggagccagcggacgcctctcccgccagtttcactcc
gacatagccagcgtgagcggccggtggtag

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