Oryzias melastigma (Indian medaka): 112162221
Help
Entry
112162221 CDS
T07439
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112162221 (gtf3c3)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
112162221 (gtf3c3)
TFIIIC, fungi type
112162221 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_14
TPR_19
TPR_6
TPR_11
TPR_7
TPR_CcmH_CycH
TPR_12
TPR_17
ANAPC3
TPR_9
TPR_10
Sel1
HAT_PRP39_C
ChAPs
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
112162221
NCBI-ProteinID:
XP_024153735
Ensembl:
ENSOMEG00000022536
LinkDB
All DBs
Position
LG15:complement(15934003..15944986)
Genome browser
AA seq
934 aa
AA seq
DB search
MSAFSSELIDYLEGRITFEEFDRRRDERKAEESERAEDVEEDVQPCSSAQTLVKPEDEVS
PGVQQAFASILGDSVEPPSSEEEEEDTLSYVDDEDDKDFVVEEKSSEAKSRKARKKRGRG
KERARRRQKPDKEEEEQEEEEEDVTVGDVFALEMELNRESKKHIRGRRHGSKLPTALRGL
MGEANIRYARGEKDTAVLMCMEIIRQAPLAYEPFSTLAMIYEDEGNGDKALQFSLIAAHL
NPSDCEEWIRLAEISLEQNNVRQAILCYSKAIKYDPTNVRYLWERSSLHMRLGEHKQCMD
GYRKILLLLPLEDGEQFMQLSKDMARSYYESNDLPAALGVIEEALSRHPGLVGDDFVNMA
AELYISSRKHSKALQVLVKFTDVVLVRDSATSEGPSQGEEAGEKKVTSEDGAALNPAEEE
TAGSYSDIKAVRIADSVPVDLRAKLLVCLINLQVFTPLEPLVSALMEQSPEEIGDLYLDV
GEAYLEQGRYASAQPLLSALIVSEKYNLAVVWLRHAECLKALGNMQAAADSYSKVVEMAP
QHLEARLCLATLQQQLGHMDGALKALESMYDSETLAQDSNAAQKELKLLLHRSTLLKTQG
QLHDYLDAVISMISMLLKVAMQRAKVCVRAAPLAGGTHLRLQKVEELLPEISDHETAYSD
NTCKTSVLSREDWWQLLVSCILTLCQLQRCGEAELLVESAMEFYSFYDNKPRRRELEFFG
LSATVLNHDHIKAYNYIRLMLIENVNLPQLWNLFNQLIITSKHQRHHRFSLRMLLKYPDN
HALCVLCGHNALVSGSFKHALGQYVQAFQTHPDNPLYSLCVGLTFVHMATQKFVAKRHAL
VLQGFSFLWRYVELRGECQESMYNLGRALHQMGLTHLAIHYYQKALELPATKLSGIADDQ
VDLRREIAFNLALIYQASGNMTVARRLIYTHCIV
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttcagcagcgagctaatcgattatctggaaggtcgaataacttttgaagag
ttcgacagaaggagagacgagaggaaagctgaggaatccgaacgagctgaagatgttgaa
gaagacgttcagccgtgttcgtctgcgcagacgctggtgaagcccgaggacgaggtcagc
cctggagtccagcaggcgttcgcttccatcctgggagactctgtggagccgccgtcatcg
gaggaagaagaagaggacaccttgagctacgtggatgatgaagatgacaaggattttgta
gtagaagagaaaagcagtgaggcaaagagcaggaaggcgagaaagaagcgtgggcgaggg
aaagaacgagcaaggcggagacaaaaaccagacaaggaggaggaggagcaggaggaggaa
gaggaggacgtgacggtcggagatgtttttgctctggagatggagttgaatcgggaaagc
aagaagcacatcagggggcgtcgtcacggcagcaagcttcctacggctttgcggggtctc
atgggagaagccaacatccgctacgcgcgaggagagaaagacaccgccgtcctgatgtgc
atggaaatcatccgacaggctcctctggcctacgagccgttttccacgctggccatgatc
tacgaagacgagggaaacggcgacaaagctctgcagttctctctgatcgccgctcacctg
aacccgtccgactgcgaggagtggatccggttggccgaaatctctctggaacagaacaac
gtccgccaggccatcctctgctacagcaaagccatcaagtacgaccccaccaacgtgcgc
tacctgtgggagcgctccagcctccacatgcgcctgggagagcacaaacagtgcatggac
ggctaccggaagatcctgttgctgcttcctctggaggacggggagcagttcatgcagctg
tccaaggacatggccaggagttactatgaaagcaatgaccttcctgcggccctgggcgtc
atcgaggaggctctgtcgcgacaccccggtctggtcggggacgacttcgtcaacatggcg
gctgagctttacatctccagccggaagcacagcaaagccttgcaggttctggtcaagttt
actgacgtggttctggtgagggacagcgccacgtctgaaggaccgtctcagggggaggag
gccggcgagaagaaggtgacgagcgaggacggagcggcgttgaatcccgctgaagaagag
actgctgggagttacagtgacatcaaagccgttcggattgcagacagcgtcccggtggac
ctccgagccaagctgctggtctgcctcatcaacctgcaagtcttcacccctctggagccg
ctggtgtcggcgctgatggagcagagtccggaggagatcggcgacctgtacctggacgtg
ggggaggcgtacctggagcagggtcgctacgcgtctgcgcagccgctgctgtctgccctc
atcgtttctgaaaaatacaacttggctgttgtctggctgcgacatgcagagtgcctgaag
gctctgggcaacatgcaggcggcggcggacagctacagcaaggtggtggagatggcgccg
cagcacctggaggcccggctgtgcctggcgacgctgcagcagcagctgggtcacatggac
ggcgccctgaaagccctggagtccatgtacgacagcgagacgctggcacaggactcgaac
gcggcacagaaggagttgaagcttttgctgcatcgctccactctcctgaagacccaagga
cagctgcacgactacctggatgccgtcatctccatgatctccatgctgctcaaggtggcc
atgcagcgggcgaaggtgtgtgtgcgtgcggctcctctggcgggagggactcacctgagg
ctgcagaaggtggaggagctgctgccggagatttctgaccacgaaacggcgtattccgac
aacacctgtaaaaccagcgtgctgtcccgagaggactggtggcagctgctggtgagctgc
atcctcaccctgtgccagctgcagcgctgcggcgaggccgagctcctggtggagtcggcc
atggagttctactccttctacgacaacaagccccggcggagggagctggagttcttcgga
ctgtcggccaccgtcctcaaccacgaccacatcaaggcctacaactacatcaggctgatg
ctgatcgagaacgtgaacctccctcagctgtggaacctcttcaaccagctgataatcacc
tcgaagcaccagcgccaccaccgcttctccctgcgcatgctgctgaagtatcccgacaat
cacgccttgtgcgtgctgtgtggacacaacgccctggtgtccggcagcttcaagcacgct
ctgggtcagtacgtgcaggccttccagacccaccccgacaacccgctctacagcctctgc
gtggggctcaccttcgtccacatggcgactcagaagttcgtggccaagcgccacgctctg
gtgctgcagggcttctccttcctgtggcgctacgtggagctgcgaggagagtgtcaggag
agcatgtacaacctgggccgcgcgctgcaccagatgggcctcacgcacctcgccatccat
tattaccagaaggctctggagcttcctgcaacgaaactcagcggcatcgcagacgatcag
gtggatctgcggcgggaaatcgccttcaacctggcgctcatctaccaggccagcgggaac
atgaccgtggctcgccgcctcatctacacgcactgcattgtgtag
DBGET
integrated database retrieval system
