Oryzias melastigma (Indian medaka): 112162222
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Entry
112162222 CDS
T07439
Name
(RefSeq) tubulin alpha chain isoform X1
KO
K07374
tubulin alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04145
Phagosome
oml04210
Apoptosis
oml04530
Tight junction
oml04540
Gap junction
oml04814
Motor proteins
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112162222
09143 Cell growth and death
04210 Apoptosis
112162222
09144 Cellular community - eukaryotes
04530 Tight junction
112162222
04540 Gap junction
112162222
09142 Cell motility
04814 Motor proteins
112162222
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112162222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112162222
03036 Chromosome and associated proteins [BR:
oml03036
]
112162222
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112162222
04147 Exosome [BR:
oml04147
]
112162222
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112162222
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112162222
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112162222
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112162222
Exosomal proteins of other body fluids (saliva and urine)
112162222
Exosomal proteins of colorectal cancer cells
112162222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
112162222
NCBI-ProteinID:
XP_024153737
Ensembl:
ENSOMEG00000022517
ENSOMEG00000022557
UniProt:
A0A3B3DYW6
LinkDB
All DBs
Position
LG15:15923578..15933350
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTRRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctctatgcatgtcggccaagccggcgcccagatgggcaatgcctgc
tgggagctctactgcttggagcatggcatccagcctgacgggcagatgcccagtgataag
accatcggaggaggagacgactcgtttaacaccttcttcagtgagactggagccggcaag
cacgttcccagagcgatatttgtggatctggagccgactgtcattgatgaggtccgaaca
ggaacctaccgccaactgttccacccggagcagctgatcaccggcaaggaggatgcggcc
aacaactacgcccgcggccactacactgtggggaaagaaatcatcgacctggtgctggac
cggactcgcaaactggctgaccagtgcaccgggctgcagggcttcctgatcttccactcc
tttggaggaggaaccggctccggcttcacctctctgctgatggagcgcctctctgtcgac
tacggcaagaagtctaagctggagtttgccgtgtacccggctcctcaggtgtccacggcg
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactcggactgt
gccttcatggtggacaacgaggccatctacgacatctgtcgcaggaacctggacatcgag
cgtccttcctacactaacctgaacaggctgatcgggcagatcgtgtcttccatcaccgcc
tccctacgctttgatggcgccctgaatgtggacctcacggagttccagactaatctggtt
ccgtatccacgcatccacttccctctggccacctatgcccctgtgatatctgcagagaag
gcctaccacgagcagctatctgtcgcagacatcaccaacgcctgctttgagccggccaac
cagatggtgaagtgtgatcctcgccacggcaagtacatggcctgctgcctgctgtaccgc
ggtgacgtggtgcccaaagacgtcaactctgccatcgccaccatcaagaccaggcgcagc
atccagttcgtggactggtgtcctacaggtttcaaggtgggcatcaactaccagccacca
accgtggttcctggaggagacctggctaaggtgcagagggcggtctgcatgctgagcaac
accaccgccatcgcagaggcctgggcccgcctggaccacaagttcgacctgatgtatgcc
aagagggccttcgtccactggtacgtgggggagggcatggaggagggggagttctccgag
gctcgagaggacatggccgctctggagaaggattacgaggaggtggggaccgacagtgtt
ggagaggaggatgagggagaagagtactga
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