Oryzias melastigma (Indian medaka): 112162283 Help Entry 112162283         CDS       T07439                                  Symbol cdh23 Name (RefSeq) cadherin-23 isoform X1   KO K06813   cadherin 23 Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:oml03037]     112162283 (cdh23)    04515 Cell adhesion molecules [BR:oml04515]     112162283 (cdh23) Cilium and associated proteins [BR:oml03037]  Primary cilia and associated proteins   USH complex and associated proteins    112162283 (cdh23) Cell adhesion molecules [BR:oml04515]  Cadherins   Major cadherins    112162283 (cdh23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Fibulin_C PCDH15_12th Sde0182_C ATP1G1_PLM_MAT8 Motif Other DBs NCBI-GeneID:  112162283 NCBI-ProteinID:  XP_024153843 Ensembl:  ENSOMEG00000017683 LinkDB All DBs Position LG15:28707054..28875433 Genome browser AA seq 3364 aa AA seqDB search MSWIVGLGGRMSAAKLLLPFLVLNSFCEASNQPPRFLNYFFSTYLLIYEDTPIGSSVAQL KAVDPEEEPLLFGVTGEESMRFFSVNPDTGVVWLRQQLDRETMQEMQVVFFVSDKQEVVK DTVNIQIGDVNDNAPTFHGQPYTVHIPENTPVGKSIFMVNATDPDQGTGGSVLFSFQPPS PFFAIDGARGTVTVTRPLDYETTTAYQLTVNATDQDKVKPLSRLANLAISITDVQDMDPI FTNLPYNTNLQENVPLGYEVRKITAHDQDLGQPRGIGYTIISGNTNSVFALDYISGSLTV NGQLDRENPLYSSGFTLTVKATELKEDRSPSDATVRTTFTILLIDVNDNAPKFNSSEYRV LITELAQVGFALPLFIQAEDKDEGVNSMFQVFLTGNNSEYFTISPTAVQGRADIRVRVAL PLDYEQIRSYSFSLFANESVSEHVGFARVFIDLINENDNRPIFSKPLYNISLPENTPTGT TLLQVLATDGDMGSFGVVRYSFTDDPDQFSLDSVTGLVILQAPLDYELMRRFTLTVLATD GGGEETAGRIRVNVLDINDNAPLFQKEAYVGSLSENQQTVQSVARIRATDEDSPPNNLLT YTITSASAFPSYFSIVMVEGYAVISVIRPLDYEKVPNGMIYLTVMAKDGGNPALNSTVSV TVEVLDENDNPPEFSRQSYIIKIPENIIAGATVLVVNATDLDASREFGQASLIYSLEGSS QFRLNSRSGEITTTALLDREQKSEYILIVRAVDGGVGPQQKTGIATVNITILDINDNAPM WLDEPYNANVVEMSPINTDVISVTALDLDNGENGTVVYSISPENPFYTIDNRTGKIRTSG VTLDRESTNVRDSVLMRNIIISAVDRGSPPLRASASTTVFVNLLDLNDNDPTFVNLPFVA ELSEGLPIGTSFFRVRVEDPDEGKNGEITMALQMGMPRLDFFLNTSSGVLTSTAVLDREQ IQQYYLRIIAYDAGKFPRTSTSTLTVLVLDVNDETPTFNPRVYNVSLKENIPRDFVVTLL SCSDNDTGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDREAQAAYSLVVEAIDNGP AGSRRTGTATVFVEVLDVNDNRPIFLQNSYETSILETVPQGTSILQVQATDADQGENGRV LYRILSGNSNNLFSIDRQSGLVTRGQKALDRETSSSHVLEVEAYNSDEGSMRSSVRVIIY VDDANDEFPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYRLISGSDRKFE VDVSTGLVTTVDYLDYETKTTYMMNVSATDQAPPFHQSFCTVYVTLLNELDEAVAFLSGG YEASVRENIATGTEVIQVRAQSADNLNQLTYRFDPDTSPAALALFKIDSVTGRITVTGLL DREKGDFYTLTVVADDGGPKKDSNVKVSITILDENDNSPEFDITSDTSVSIPEDTPLGRK VAVVLGRDRDAGLNGLVNFTLVAGNMQDVFKIKTVNNTYGEVILNALLDRESVDRYLLRV RATDNGSPPRFTDHSLTINILDVNDNAPVVESPRGYNVSVSENVGGGTSVLRVVATDRDI GPNALLSYYITDGNQDLTFRMDRMTGEMVTRPAPPDRERQQQYVLTVTVEDDGTPPLSTS TTVYVRIVDENDNAPEFPEEEYVTVLSEGPETVGATIATVTAVDPDEGLNGTLRYAITQG NLNQTFNINSITGRITAVKALDYEISHGNYALVVTATDQCPKPALRLTSSTTVLVNVLDV NDVTPTFPRAYEGPFEVTEGQPGPRVWTLKASDEDSGLNGKVEYSITGGDLQNEFTISPV DGELRVRKDVELDREAIAFYNITVTARDLGKPPLNSSVVVGVLVLDINDNDPVILNLPYN TSVSEGAPIYTSVGRVQARDADSGRNALLTYNITAGNPGGAFYINDTTGVVSVNRPLDRE RVAEYTLTITVKDNPENPRIARRDSDFLVITILDENDNRPIFTMTNYRAEVVENSAAGTT VTVLNGPVLALDNDIGPYAVVKYRLLGQRVDLFTVDPNTGILLVRQGAKLDREAFQDPRV ELILVGEDIGGLNSSVPLTITILDQNDNPPVFSPSSFSVRLPENSPTGVVVTQLSATDAD SGSNGWLMYRLESGAQDRFVVDSLSGAVLVGNTTLDREERASYRLVVMATDRGTPPLSGT ATLTVILDDVNDSRPRFIEPVTMINVNESTPPGVVVATLTAEDPDLNPRLEYYIISVEAK DDGNKPVNGLQQSFGIDLHTGAVFVRNPINRELVATFDIIVSVHDNASDVIDKSTSVPNA RLTINVLDVNDNAPRFRPFGVSNFTEQILEGAQPGTTLLSVSAVDPDKGPNGQVTYQLLH LPRGEYVRLEDPSIGKIVANKTVDFEQVQWLNFTIQAQDQGSPPRSVELPVYLRIVDVND NNPVFLQPSYQEPVFENVDLGTTIIRVRATDADSGLFAAIEYSLVDGEGKFAISPTTGEI YIISPLDRETKDHYTLTAVARDNPGGSSNNRRENSVQVLVTVLDVNDYRPRFTKRLYNVS VFENEPSGTSVVTVTAVDLDEGENAAVLYSMLGSRLDAFSLDPNTGLIRSRRLLQSTESF NFTVVATDQGRPPMWGTANLIITVIDVNDNRPVFVRPVNGTIIHIYEEQPPGVLVYEVYA TDSDAGVNGEVRYAFLQTGDWENFHIDPLSGVITTTVKLDREKQALYSLIIVAHDLGQPV PYETTQPLQVALLDIDDNEPVFLKPPRGSLPYQVLSVPEQSPPGTRVGNVTRAVDADEGS NAIVFYFIAGGNSEGNFALSLEGELRVLKELDREVTPFYSIIIKASSNRSWTPPKGQRSS GTKALDPALDPSLLAVRIELEDINDQTPRFTKAEYTAGVAANAKVGSELIKVLAIDNDIG NNSVVLYHIITIHYFQSQSNGSEDVGSVFTIGLTDGLIRTYDLFTAYNPGYFQLEILARD YAGHSTTANVNIYILRDDQRLKIVFNEIPDFVRENKEDFINLLSNITGSIVNLDDIQFHV DKKGRVSYSQTDMLIHVVNNQTNTILDVERVIQMIDENKEQLRNLFRTYNVVDVQPAVGD KVPDDISTLQLVIIILAVLLCLAGILFVTMNWHYRRVHQRKLKAIVAGSTGNQGLMDILD MPNTNKYSFEGANPVWLDPFCRNLELAVQADHEDDLPENLSEITDLWNSPARTHGTFGRE PQARPEDDRYLRAAIQEYDNIAKLGQIMREGPIKGSLLKVVLDDYLRLKKLFAARLVTAS TDQGDHSSVTELIQSDLDEDEDEHLGVGGGHGTLRFKHKLPVELKGPEGVHVVHGSTGTL LTSDLNSLPEDDQRALARSLEALNADGGLYSERNARTESAKSTPMHRQKDGDTLSGSPLE ITEL NT seq 10095 nt NT seq  +upstreamnt  +downstreamnt atgtcgtggattgtgggattaggtggcaggatgtcagctgctaaactcctccttcctttc ctcgtattaaattcattttgtgaagcctccaatcagccgccacgtttcctaaactacttc ttctcaacctaccttctgatttatgaggacacgcccataggttcctctgtggcgcagctt aaggcagtagaccccgaggaggaacctctgctgttcggggtcactggagaagaatccatg aggtttttttctgtgaatccggacactggcgtggtctggctccggcagcagctcgaccgt gagaccatgcaagagatgcaggtggtgttcttcgtcagtgacaaacaggaggtggtcaaa gacacagtaaacatccagattggagatgtgaatgacaacgcaccgaccttccatggacag ccttacaccgtgcacatccctgagaacacaccggtgggcaaatcaatatttatggtgaat gccacagatcctgaccagggaaccgggggcagcgtactattttctttccagccaccatct cccttttttgcgattgatggggcccgaggcacagtcaccgtcaccagacctctggactat gagacaaccaccgcctaccagctcaccgtcaacgccacagatcaagacaaagtgaaaccg ctgtcccggctcgccaatttagccatctccatcaccgacgtgcaggacatggacccgatc ttcaccaatctgccctacaacaccaacttacaggagaacgttcccctgggctatgaagtg cggaagataacggcacatgaccaggatctgggccaaccacggggaatcggctacaccatc atctcaggaaacaccaacagcgtgtttgccctggactacatcagtggctccctgaccgtg aatggccagctggaccgagaaaacccgctctattcgtcaggattcactctcacagtcaag gccactgaactgaaagaagatcgcagtccgtctgatgccactgtgaggaccaccttcacc atcctcctaatagacgtgaatgacaacgccccaaagttcaacagctcagagtaccgggtc ctcatcacagaactggcccaggtgggctttgctttgccactcttcatccaagcagaagat aaggatgagggggtgaacagcatgttccaggtgtttctgacaggaaacaattcagagtac ttcaccatctcccccacagcagtacaaggacgtgccgacatcagagtgagggttgccctg cccctcgactacgaacagattcgcagctacagcttttcactttttgccaacgagtcagtg tctgaacacgtgggatttgctcgtgtttttatcgatctcatcaatgagaatgataaccgg cccatcttcagcaaaccgctgtacaacatcagccttcccgaaaacactcccaccggtaca accctgctccaagtcctggctacagatggagacatgggttcgttcggggtagttcggtac tccttcactgatgatccagaccagttttcactggactctgtcacaggcctggtcatcctg caggctcctcttgactatgagttgatgcgtcgtttcacactgaccgtgctggcgacagac ggcggcggggaggagacggcgggaaggatccgtgtcaacgtgctggacattaacgataac gcgccgctctttcagaaggaggcctacgtgggttcgctgagtgagaaccagcagacggtc cagtcagtggccagaatcagggcgacggatgaagactcgccccccaacaacctgttgacg tacacaatcacctcagcatcagccttccccagctacttcagcatcgtcatggtggaaggt tacgcagtgatcagtgtgatcaggccactcgactacgagaaggttcccaacgggatgatc tacctcacagtgatggccaaagatggggggaacccggctctgaacagcactgtgtctgtc actgtggaggtgttggatgaaaatgacaacccccctgagttcagcaggcagtcttacatc atcaaaatccctgagaacattattgctggagcaacagtgctggttgtgaatgccactgat ttagatgcttcgcgggagtttggccaggcctcgctcatctactccctggagggttcctct cagttccgtctgaattcacgttcaggagaaatcaccaccacggccctgctggaccgagag cagaagtcagagtacatcttgattgtcagagctgtggatggaggagttggtccacaacag aagaccggcattgccacggtgaacatcaccatcctcgacatcaatgacaacgctcccatg tggctggatgagccgtacaatgccaacgtggtggagatgagtcccataaacactgacgtt atctctgttacagcactggacctcgataacggtgaaaatggaaccgttgtttacagcatt agtccagaaaatcctttctacactatcgacaaccgaacagggaagatccgcaccagcggg gtcactctggacagggagagcacgaacgtcagagactcggttcttatgaggaacatcatc atttcagctgtggaccgtggttcacctccactgcgagcatctgcaagcacaacagtgttt gtcaacctgctggatctcaacgacaatgacccaacatttgtcaacttgccatttgttgct gaattatccgaaggactacccattgggacttccttctttagggtcagggtggaggacccg gatgaggggaagaatggtgagattacgatggctctgcagatgggaatgcctcgccttgat ttcttcctgaacacgtccagtggcgtgctcacctccacggcggtcctggatcgtgagcaa attcaacagtactatttgaggatcatcgcgtatgatgcagggaagttccctcgtacttct acttccaccctcactgtcctagttctggatgtaaatgatgagacgcccaccttcaatccg cgcgtgtacaatgtttccctgaaggagaacatccctagagatttcgttgttacactcctc agctgctctgacaacgatacgggtctcaacgccgagcttagctacttcattacaggtgga aaccaggatggtaaattcagcgtgggcttcagagacggtgtggttcggacggtggtcagt ctggacagagaggcccaggcagcatacagtctggtagttgaagccattgacaacggtccg gcaggcagcaggagaacaggaactgcaacggtatttgttgaggttctggacgtcaacgac aatagaccaatttttctgcaaaacagctacgagaccagcatcctggaaactgtcccccaa ggaaccagcatccttcaagtacaagccactgatgcagaccagggagaaaacggccgagtt ttgtacagaatcctctctggaaacagcaacaacctgttcagcatagacagacagagcgga ctagtgaccagaggacagaaggctcttgacagagaaaccagcagctcccatgttctggag gtggaggcctacaacagcgatgaggggagcatgaggagctctgtgagggtgatcatctac gttgatgacgccaatgacgagtttccagttttcacgcagcagcagtacaaccgtctgggc ctgagggagactgctggcatcggcacttctgtgattgtggtgcgcgccacagaccccgac actggtgatggaggagccgtcgcctaccgcctcatatctggctctgaccgcaagtttgag gtggatgtgagcactggtctggttacgactgtggactacttagactatgagaccaagacc acctacatgatgaacgtctcagccacagaccaggcccccccgttccatcagagcttctgc acggtgtatgtcactttactgaacgagctggacgaggccgtcgcctttttatccggcggc tacgaggcctcggtccgggagaacattgccacggggacggaggtcatccaggtgcgggcc caatctgcagacaacctcaaccagctgacctaccgctttgaccctgacacctcacctgca gctctggcgctcttcaagatcgacagcgtcacgggccgcatcacagtgacgggtctgctg gacagagaaaagggcgacttctacaccctgacggttgtcgctgatgacggagggccgaaa aaggactccaatgtgaaggtgtccatcaccatcctggatgaaaacgacaacagtccagag tttgacatcacttcagatacctccgtgagcatcccagaagacacacccctgggcagaaaa gtggcggtcgtcctggggagggacagagatgctggtttaaacggactggtgaatttcact ctggtggctggcaacatgcaagacgtcttcaagatcaagacggtgaacaacacctacgga gaggtcattctcaacgctcttctggacagagagtctgtggaccgatacttactgagggtt cgtgccacagataatggttcacctcccaggttcacagaccactcactcaccatcaacatc ctggatgtcaatgataatgctcctgtcgtggagagcccgaggggctacaacgtcagtgtc agtgagaatgttggaggagggacctcggttctccgtgtggtggccaccgacagggacatt ggccccaacgccctgctttcctattacatcactgatgggaaccaggacctgaccttccgc atggaccgtatgactggagagatggtgacgcgaccggctccaccggaccgggaacgccag cagcagtatgttctcacggtcacggtggaggatgacggcacgccgcctctgtcgacgtct accacagtttacgttcgcatagtggatgagaatgataacgctccggagttccccgaggag gagtatgtcacagtgctgagtgagggaccagagacagtgggggccaccattgccactgtg actgccgtggacccagacgaaggcttgaatggcaccctgcgatacgccatcactcagggc aacctgaaccagacttttaacatcaacagcatcacggggagaattactgctgtgaaggca ctggactacgagatcagccatgggaactatgcactcgtggttacagcgaccgaccagtgt ccaaaacctgctctacgtctgacgtcaagcacaacagtgttggtgaatgtcttagatgtg aacgacgtcacacctaccttccccagagcttatgaaggcccctttgaggtgactgagggc cagccggggccccgcgtgtggactctcaaagccagcgatgaagactctggtctcaatgga aaagtggagtacagcatcactggaggagatcttcagaatgaattcacgatctctcctgtg gacggagagcttcgggtgaggaaggacgtggaattggacagagaggccatcgctttctac aacatcacggtcacagcacgagatctgggaaaaccgcccctcaacagttcagtggtggtt ggcgtccttgtcctagacatcaatgataatgacccagtcattcttaacctgccatacaac accagcgtcagtgagggcgcccctatctacacctctgtgggcagagtgcaggcccgggat gcagacagcgggcgcaatgccctgctcacctataacatcactgctggaaaccccggagga gccttctacatcaacgacacgacgggtgtggtgagcgtcaacagacctctggacagagag cgagtagcagaatacacgctcaccatcacggtgaaggacaaccctgagaacccccgcatc gctcgccgggactcagacttcttggtcatcaccattttggatgagaatgacaacaggccc atattcaccatgacgaactacagagctgaagtggtagaaaactctgcagcaggcaccact gtaacagtcctgaacggtcctgttctggccctggataacgacattgggccttacgctgtg gtaaagtatcgcttactgggacagagggtggacctctttactgtggacccaaacacgggg attttacttgtacgtcagggagcaaagttggatcgagaggcatttcaggatccacgggtg gagctgattctggttggagaggacattggaggtttgaacagcagtgtccctctcaccatt acaatcctggaccagaatgacaatcctccagtcttcagcccttccagtttcagcgtgcgg cttcctgaaaacagcccgactggtgtggtggtgactcagttgtctgccactgatgctgac tctggctccaatggctggctcatgtatcggttggaaagcggcgctcaggaccgctttgtg gttgactcgctgtccggtgcagtgctggtaggcaacaccacactggacagagaagagcgt gcatcctatcgtcttgtggtcatggcaaccgaccgtggcacaccccctctgtcgggcaca gccacgctgacagtcatcttggacgacgttaacgactcgaggcctcgtttcatagagcct gtaaccatgatcaatgtgaatgagtccaccccgcctggggttgtggttgctacgcttact gcagaggacccggatctgaatccacggctggagtactacatcatctcagtggaggcaaag gacgatggaaataagccagtgaatgggctgcagcagtcctttgggattgatttacacaca ggtgcagtttttgtgcgtaaccctatcaacagagagctggtggccacgtttgatatcatt gtgtccgttcatgacaacgccagcgatgtcatagataagtcaaccagtgttcctaatgcg aggctcaccatcaacgtgttggacgtaaatgacaacgccccccgttttcggccctttgga gtgtccaacttcacagagcagattttagagggggcccagccaggaaccacactgctgtct gtgtccgctgtagaccctgacaaaggtcccaatggccaggtcacctaccagctcctccac ctgccgcgaggagaatacgtcagactggaggacccttcaataggaaagattgtagccaac aagacggtggacttcgagcaagtgcagtggttgaatttcactatacaagctcaggaccaa ggttccccccccagaagtgttgagctgccggtttatctgcgaatagtggacgtcaatgac aacaaccctgtgtttttacaaccctcctaccaggagcctgtgtttgaaaatgtggacctg ggtaccaccatcattcgtgtcagagctacagatgctgactctggcctctttgctgctatt gagtacagcctggtcgatggggagggcaagtttgccattagcccaactacaggagagatc tacatcatttctcctctggacagagagacgaaagaccactacactttaactgctgttgct cgagacaaccccggtggaagctccaacaacagacgagaaaactctgtccaggtcttggtg acggttttggatgtcaacgattatcgtccgcgcttcacaaagcgactttacaacgtcagc gtgtttgagaacgagcccagtgggacgtcggtggtcacggtcacggcggttgatctggat gagggggagaacgctgctgtgctctacagcatgcttggatcccgtttagacgccttctcc ttggatccaaacaccggactgatccgttctcggcgtctacttcagtctacggaaagtttc aacttcacagtggtggcgacagatcagggtcgcccccccatgtggggcacggccaacctg atcatcaccgttatcgacgtcaatgacaacaggcctgtgtttgttaggcccgtcaatgga accatcattcacatctatgaggagcagcctccgggcgttttagtgtacgaggtctatgca acagactctgatgcgggagtgaacggagaggtccgctatgcctttttgcagacaggagac tgggagaacttccacatcgatcccctgtccggagtcatcaccaccacagtgaaactggac cgagagaaacaggctctctacagccttatcattgtggcccatgacttgggtcagccggtg ccttatgagaccacacagcctctgcaggtggcgctgttggacatagatgacaatgaacct gtcttccttaaaccacctcgtggcagcttgccttaccaagttctgtcagtgcctgagcag tccccccctggcaccagagtgggaaatgtaaccagggccgtggacgccgatgaaggctcc aacgccatcgtcttctatttcattgcaggaggaaacagtgaaggaaactttgccctgagt ctagaaggagagctgagggtgctaaaggaactggaccgagaggtgacgccattttactcc atcatcatcaaggcctccagcaacaggagctggacccctcccaagggtcagaggtcgtcc ggtaccaaagccttggatcccgctcttgatccaagtctgctggcagtccgaatcgagctg gaagacatcaacgaccagacacctcgcttcactaaagcagaatacacagcaggagttgca gcaaacgccaaagtgggctctgagctgatcaaagttctggccatagacaacgacattggg aacaacagcgtagtcctttatcacatcatcaccatccattacttccagtcccagagcaac ggcagtgaggacgttggaagtgtcttcactattggtttgacagacgggctcatccgcacg tacgacctcttcactgcctataatcctggttattttcagctcgagattttagctcgggac tacgctgggcacagcaccaccgccaatgtcaacatctacatcctccgggacgaccagcgc ctcaagatcgtctttaatgagattcctgattttgtccgtgagaataaagaagatttcata aatcttctgtcaaacatcaccggctccatcgtgaacctcgatgacatacagttccacgta gacaagaaaggcagagtgagctacagccagacggacatgctcatccacgtggtgaacaat cagaccaacaccatcctggacgttgaaagagtaatccagatgattgatgagaacaaggag cagctgagaaacctgttccgaacgtacaacgttgtggacgttcagcctgcggttggtgac aaagtgcctgatgacatttccacactgcagcttgttatcatcatcctggcggtgctgctg tgtttggctggaattctgtttgtaacgatgaactggcattatcgcagagtacaccaaaga aagctgaaagcgatcgttgcaggatcaacaggaaaccagggtctgatggacatcctcgac atgcccaacactaacaagtactcctttgagggggcgaatccggtgtggctcgacccattc tgtcgcaacctggagctggccgttcaagctgaccacgaggacgacctgccagagaacctg agcgagatcaccgacctgtggaacagccctgcgcgcactcatggcaccttcggtcgagag ccccaggcgaggccagaggatgaccgctacttgagagccgccattcaggagtatgataac attgctaaactgggtcagattatgagggagggacccataaagggttccctgttgaaagtg gtcctggacgactacctgaggctgaaaaagctctttgcagcgcggctggtcacagcttcc acagaccagggagatcactcatccgtcaccgagctgatccagagtgatttggatgaagat gaggacgagcatttgggcgtgggcggaggtcatggcacgttgcgattcaagcacaaactt cctgtggaactgaaaggccccgagggcgtgcatgtggtccacggcagcacaggcaccctc ctgacctctgacctcaacagcctgccagaggacgaccaacgggccctagcacgctcactg gaggctctgaatgcagacggaggcttgtactcagagcgcaacgcccgcactgagtctgca aagtccacgccgatgcatcgccagaaagatggcgacacgctgtcaggaagccccctagaa atcacagagttatga

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