Oryzias melastigma (Indian medaka): 112162331
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Entry
112162331 CDS
T07439
Name
(RefSeq) caveolae-associated protein 1
KO
K19387
polymerase I and transcript release factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112162331
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
112162331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTRF_SDPR
Apolipoprotein
DUF1664
Rx_N
Calici_PP_N
Motif
Other DBs
NCBI-GeneID:
112162331
NCBI-ProteinID:
XP_024153894
Ensembl:
ENSOMEG00000014302
LinkDB
All DBs
Position
LG19:complement(20013460..20035997)
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AA seq
467 aa
AA seq
DB search
MAAMEPLESASALLEPQTLTEISDDEVNLPPSDDEDNALAAAKKDPPTTSSDGETQEAKD
EALKVDQQVNGVMVLSLLDKIIGAVDQIQQTQSGLESRQQDMERSVTSIQGELTKLSKSH
STTSNSVNKMMEKVRKVSVNVKTVRATLEKQGGQIKKLETNEAELLKRRNFKVMIYQDET
KLPSKLSISKSMRTSESVTGSRGGSMLELKEATEEPGEEAGEGEKEDKPHVDLSSDEEGL
EIEEVIEESRAERIKRSSLQRVQNLKTVFSREKMDRTRAKTKENLEKTRQKTKENIEKTK
QKTKENLEKTRQKTKENIEKTKQKTKENLEKTRHNIEKKMGKLGTRMSVNPERKQKMKTS
SEKMKKAFTPDHVVYARSKTAVYKVPPFTFHVKKIREGAVEVVHGTEMVEVSREAEPLDE
IEGEVDDVEVEVEMEIANGGGADEDELEEEEDEDALQDHDDKERDSE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatggaaccactggaatctgcaagtgctctgctggagcctcaaaccctcaca
gaaatctcagacgatgaggtcaacctgccaccctctgatgatgaagacaatgctctggca
gcagccaagaaagacccaccgaccacgagctcagatggagaaacccaagaagccaaagat
gaggccctgaaggtggaccagcaagtgaacggggtcatggttctctctctgcttgacaag
atcattggagcggtggaccagatccagcagacccagagcggtctggagagccgccagcag
gatatggaacgctcggtcaccagcattcaaggcgagctgaccaagctgtccaagagccac
agcaccacatccaacagcgtcaacaagatgatggagaaggtgcgcaaggtgagcgtcaac
gtcaagacggtgcgggccaccctggagaagcagggaggccaaatcaagaagctggagacc
aacgaggcagagctgctgaagagacgcaacttcaaagtcatgatctaccaggatgaaacg
aagcttccttctaaacttagcatttccaaatccatgaggacctcagagtctgtcacaggc
agcagaggaggcagcatgctggagctcaaggaggccacggaggagcctggagaggaagca
ggagaaggcgagaaggaagacaaaccccacgtggatctgtcatcagatgaggagggtttg
gagatcgaagaggtcatcgaggagtcccgtgctgagcgcatcaagcgcagcagtctgcag
cgagtgcaaaacctcaaaaccgttttctccagggagaaaatggatcgaacccgagcaaag
accaaagagaacctggagaagaccagacaaaaaaccaaggagaacattgagaaaacaaag
cagaagacaaaagagaacctggagaagaccaggcaaaagaccaaagagaacattgagaaa
acaaagcagaagacgaaggagaacctggagaagacgcgtcataacatcgagaagaagatg
gggaaactcggcactcgcatgagcgtcaatccagagcgcaaacagaagatgaagacatcc
agcgagaagatgaagaaggccttcacaccagaccacgtggtctacgcccgctctaagaca
gccgtctacaaagtgccccctttcaccttccacgtgaagaagatccgcgaaggggccgtc
gaggtcgtccatggaacagagatggtggaggtgtcgagggaggcagaacccctggatgaa
atagaaggggaggtcgatgacgtggaggtggaggtagagatggagatagcaaacggagga
ggtgcagatgaagatgagctggaggaggaggaggacgaggacgccctgcaggatcacgac
gacaaagaaagagacagcgaataa
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