Oryzias melastigma (Indian medaka): 112162341
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Entry
112162341 CDS
T07439
Symbol
tdrkh
Name
(RefSeq) tudor and KH domain-containing protein isoform X1
KO
K18406
tudor domain-containing protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112162341 (tdrkh)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112162341 (tdrkh)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TUDOR
KH_1
KH_Vigilin
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_PARP14_3
Yae1_N
Motif
Other DBs
NCBI-GeneID:
112162341
NCBI-ProteinID:
XP_024153909
Ensembl:
ENSOMEG00000015063
UniProt:
A0A3B3C706
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Position
LG19:20523633..20534674
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AA seq
585 aa
AA seq
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MRGLAFSASGLLLSASHETRLRGRSRGVKRGASSSWGRTSMDALKEGHKMSLSSGKVVAL
AAGFSVGLTVGYIFYRRISSNAGEDTDKEVCKMTLPVEVYRNLSRSQAKFLEIVNHKSGA
HVSVLSESAEPGCEAGVRFLLQGSKEQVLLAHCVLKNLISDYEPASEVLEVPQVSVGRII
GRGGESLKLITRTTGAKVIFSKEKTPIPGAKGSVTITGTRQEVKHAKEMILDKVRQDTLV
RSKISQSSALRQKRGGSQKPDPAALESPRGLNNNGPVFQTEKISPLHDCGDMQEPEEQKT
TDSMAESLSTESLNEISTFEIPSPDLSFQPDEHLEVYVSASENPNHFWIQILGVRSYQLD
KLTEEMNRFYSGANPTEQRVETVVVGDIVAAPYQDHSTWNRAKVLGVLGSGLVDLYYVDF
GDNGELPRDRLRRMRSDFLSLPFQAIECTLAGVKPKGEVWTEEALDVFEQLTHCASWRPL
QAKLCSYSHSEISSWPSVQLYDNSDGQAVDIGEELIRLGHAVSYQEVLNTSAEGDNRGSL
QQMLDDVIGASSELSMSCISLSDAASFSGSVDVPDDELLLDQSDK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagggggctcgctttttctgcttccggtctgctgctctcagcgtcgcacgagacacgt
ctccggggtcgatccagaggagtcaagaggggtgcatcctcctcctggggcagaaccagc
atggacgccctaaaggagggtcataagatgagcctgagctcagggaaagtggtggctctg
gctgcaggattctctgtgggactcacagtgggttacatcttctaccgtcgaatcagcagc
aatgcaggtgaagacacggacaaagaagtatgtaaaatgaccctgcctgtagaagtctac
agaaacctctccagatcccaggccaagtttttggaaatagtgaaccacaagagtggagct
catgtgagcgttttgtcagaatctgcagagcctggatgcgaggcgggcgtgcgtttcctg
cttcaaggctcaaaggagcaggtcctactggcccactgtgtcctgaagaacctgatcagt
gactatgaaccagcatcagaggttctggaggttcctcaggtctctgttggacgcatcata
ggacgtggtggtgaaagcctgaagctgatcaccaggaccacaggagccaaagtgatcttt
tccaaagagaagacccccatcccaggggcaaaaggcagcgtgaccatcacggggaccaga
caggaggtgaagcacgccaaggagatgattctggataaagtcagacaagacactttggtg
aggtccaagatctcacagtcatcagctcttcggcagaaacgcggtggaagccaaaagccc
gaccctgcagcgctggagtccccgcggggtctgaacaacaacggcccggtcttccagact
gagaagatctctcctcttcatgactgtggggacatgcaagaaccagaggagcagaaaacc
acagacagcatggcggagagtctctccaccgagtctctcaatgaaatatccacgtttgaa
attcccagcccagaccttagcttccagccggatgaacacctggaggtttatgtttctgca
tcggagaacccaaaccacttctggatccagatcctgggggttcgctcctaccaactggac
aagctgacagaggagatgaaccgcttctacagcggggctaaccccacagagcagagggtg
gagacggttgtggtgggggacattgtagcagctccataccaagaccactcaacgtggaac
agagccaaggttctgggagtcctgggctctggactggtcgacctctactatgtagacttc
ggggacaatggggagctgcccagagaccggctgcgccgcatgaggagcgacttcctcagc
ttacctttccaagctattgagtgtaccttagcaggagtgaagcccaaaggagaggtgtgg
acagaagaggctctggatgtctttgaacagctgacacactgcgcctcctggaggccgctg
caggccaaactctgcagttactcccactctgagatctcctcctggcccagtgttcagctc
tatgacaacagtgacggacaagctgtggatatcggcgaggagctgatacgtctgggtcat
gcagtgagctaccaggaggtgctgaacacgagtgctgagggggacaatcgtggctctttg
cagcagatgttggatgatgtcatcggagcctcgtcagagctcagcatgtcctgtatcagt
ttatcagatgcggcctcattctcaggaagtgttgatgttccagacgatgagctgctttta
gaccaaagcgacaaataa
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