Oryzias melastigma (Indian medaka): 112162355
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Entry
112162355 CDS
T07439
Symbol
grin2da
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04020
Calcium signaling pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112162355 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112162355 (grin2da)
04082 Neuroactive ligand signaling
112162355 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112162355 (grin2da)
Ion channels [BR:
oml04040
]
Ligand-gated channels
Glutamate (ionotropic)
112162355 (grin2da)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
112162355
NCBI-ProteinID:
XP_024153936
Ensembl:
ENSOMEG00000015715
UniProt:
A0A3B3C8H1
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Position
LG11:11933892..12181157
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AA seq
1970 aa
AA seq
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MVAPGPTLSLLLAVLACMGPVRPSPPLLLRPRERERDSGGINIAVVHSGSSLLPETAVAG
GAGVGEPGGASGLGNGPGGGGGRGVAETASLAELTGMGSLAASSSYLAALVGETVMTPSG
QANVIYLAVNESSPGTLLLQLCELLATTPLQGLVFEEERPPPPNRAPLAPMLEFVSAQTG
VPVVAVGGGASLGREPQESGSIYLQFTCSTILQLEVIFEVLEEYDWTAFSVVTTRHHGYE
DFLAMVEGMTDGSFIGWEKKSVVVLNVTDDPGGARTKRLLKDNESQVRLLYCSMEEAELI
FRAAWAAGQAGPSHMWFAVGPALSGLGLEGLPKVLFAIRPQGWRDEPRRRIAKGVSVLTH
GAMALRRDQGATSRAQYAGNCQSDGNNTHRVLDRIRYFTNISIGGRDYSFNSDGYLSNPL
IDVISYTNGRGWEEVGWWENGHLRLRYHPWSRYGSFLKPLDDSQHLRVVTLEERPFVIVE
PADPGTSSCIRDSVPCRMPMNSSLVVEGATPMKHCCKGFCIDVLKRLAKIVGFTYDLYLV
TNGRHGKNIDGEWNGMVGEVVSNRADMAIGSLTINEERSEVVEFSVPFVETGISVMVSRS
NGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKKTGGSKFT
IGKSVWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYID
TVSGLSDKKFQQPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYMIRNNQKGVEEAIDNL
KTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALL
QLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
VYWKLRHCVKRSGGMDFLLALSRGMYSCCQFEDETAPGGGTSTLPQYHTVTTMPTAPQQH
LVTATVNNTTAIAMVQQQQKHHQQPSGQTYTTMLPGSPPTTGHSAVALGPSNSPLLEGPM
PCSTFLPRHDRRLAVVDRWNRPKQEKAMSGGNSGGVGIGGIAGGITDLQAKQQYQQNLGQ
AWSMQRGAGIACDTSLDEYKRYYGPIDPEGLGSNTDQQVGGLQQTPKANPRGIKALGMPR
VPPKGMQQGQAHLISKPPPLMPSSPRRPPFWRRGSLAQARRKGSGGPLYENILPLGRRGG
GRYGANDGGRKRGRHPLPPPPLPVPLSSPTHTPTTPSSPCRFYSSCSSASSSSSSSSSSS
SSSSSVSLSRSNSPSSCSSDSSYNSSLSFRYRAGNRDFVVDDEGDSDFLTEESSLLLGSK
KKVRSRRMSSRSLPCSPPPPPIPPRKPRPQRDYGRDRTGSQLAQLQEWWASWADRERGRR
SSTSRGDGEVSREEKRHHKERERERKRRKKGRKKKKREDRERERERKRRKTKKKRKKEDK
TRKREQKRSEQEGGEPDKREELKSGTPEFPPYPSLRRQSFRKKSESSIRSYGWNIPGENE
RKEREEKERDDGEDSKGKERHHRRRNSKHYHSSSSKPSTSVKFWGGGNPSSDATPSAFLP
LLPTSSKRRKSKSSDRDAVGMEGERRPLLGRNDRAELHSKEGLSFHEWESAAENVVDESE
TEMRKTEHGKRHRGGRTTSDEERERDKVVGIYSDDDGSSGEFGKFERYWDDHEGRAVGGI
GGGGWFFSTYPSRDKTGSINSRDDLFLERGERWGTAESGWSSSAVGGGGEERGWGSGSHW
PPPPLTPPPPRRYWSVDKLHIQDEKKSKRKSKDKSKGHTTCSSCHSPRHHPHSSKWARSA
SRSQEELYRHCQSFGGPLKPKHDSSSSSKPDRSHNPSKTGSQSNLSIQQRTQRVDRDRER
GIQPSPPSSLIPNLPPPLPALPAPPSSSHSIHVPPQTSSSSVSSPSVVSSAPGAPHASSM
ASASAKLQYQRLRSVPQPQRFPQSPHLPLKAKSLCSRRDSAQFSSVESEV
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atggtggccccagggcccaccctctcactgctgttggctgttctggcctgcatggggccc
gtgcgcccctcgccccccctgctgctccggccccgggagagagagagggactcgggtggc
atcaacatagccgtagtccactctggctcctccctgctcccggagacggcggtggcggga
ggcgcgggggtcggcgagccaggtggtgcgtccggtctgggaaatggtcctggaggagga
ggaggaaggggagtcgcggaaacggcctcactggcagagctgaccggcatggggtctttg
gctgcgtcttcgtcatatctggcggctctggttggggagacggtgatgacgccatcgggt
caggccaacgtcatctacctggctgtgaatgagagcagtcctggaaccctgctgctgcag
ctgtgtgagctgctggccaccacgcccctgcagggcttggtgtttgaggaggagaggccg
ccgccgccaaaccgcgcccccctggctcccatgctcgagttcgtctctgcgcagacgggg
gttcccgtggttgctgttgggggaggagctagcctgggccgcgagccacaggagagcggc
tccatctacctccagttcacctgctccaccatactccagctcgaggtcatctttgaggtc
ctcgaggaatatgactggactgccttctctgtggtgaccacccgtcaccatggctacgag
gacttcttagccatggtggagggtatgacagacggttccttcattggatgggaaaagaag
agcgttgtggttctcaacgtgacagatgaccccggcggggcccgaaccaaacggctgctc
aaagacaatgagtcccaggtccgccttctctactgctccatggaagaagctgagctgatt
tttcgggcggcctgggcggcgggtcaggccgggcccagccacatgtggtttgccgtgggg
cccgccctctccgggttgggcctggagggcctgccgaaagtgctgtttgccatcagaccg
cagggctggcgggacgagccacgcaggcggattgctaagggagtgtctgtgctcacacac
ggggccatggctctgcggagagaccagggggccaccagccgggcgcagtacgccgggaac
tgccagagcgacggcaacaacacccaccgagtgctagacaggatcaggtacttcaccaac
atctccatcggtgggcgggactactccttcaacagtgacggatacttgtccaacccgctg
atcgatgtcatctcctacaccaacggccgaggctgggaggaggttggctggtgggaaaat
ggacacctgcgtctgcgctaccatccctggtctcgttacggatcttttttgaagcctctg
gatgactcgcagcacctccgcgtggtcactttggaggagaggcctttcgtcatcgtggag
cccgctgatcccggcaccagctcctgcatccgggattctgtgccctgcaggatgcccatg
aactccagtttggtggtggagggagcaactcccatgaagcactgctgcaaaggcttctgc
attgatgtgttgaaacgcctggctaagattgtgggcttcacctacgacctttacctggtg
actaacggccggcacgggaagaacattgacggggagtggaacggcatggtcggagaggtg
gtctccaacagagccgacatggccatcggctccctcaccatcaacgaggagcggtcggag
gttgtggagttctccgttccgttcgtggagaccggcatcagcgtcatggtttcccgcagt
aacggcaccgtttcaccgtctgctttcctggagccctacagcccggcggtgtgggtgatg
atgtttgtgatgtgcctgtcagtggtggctgtcaccgtcttcatctttgagttcttcagc
cccgtgggatacaaccgcagcctgcagagcgccaagaagacaggcggatcaaagttcacc
atcgggaagtccgtctggctgctgtgggctctggtttttaacaactctgtgccggtggaa
aatcccagaggaacgacaagcaagattatggtgctggtgtgggccttcttcgctgtcatc
ttcctggcctcctacactgccaacctggcagccttcatgatccaggaggagtacattgac
acagtgtcagggctgtcagataagaagtttcagcagccgacagagcagtacccgcctctg
cgcttcggcacggtgccgaacggaagcacagaggagaacatccgctccaactatcccaac
atgcaccagtacatgatccggaacaatcagaagggagtggaggaggccatcgacaacctg
aagacgggtaaactggatgccttcatttatgatgcagcagtgctgaactacatggcgcgg
aaagacgaaggctgcaaggtgatgaccatcgggtcgggaaaggtgttcgccacaacgggt
tacggaatcgccctgcacaagaactcccgctggaaaaggccgctggacctggctctgctg
cagttggtgggagacgatgagatcgatatgttggagcgcctctggctgtctggcatttgc
cacaacgataagatagaggtgatgagcagtaagctggacatcgacaacatggctggagtt
ttctacatgctcttggtagccatggggctgagtctgctggtgtttgcctgggagcatctg
gtgtactggaagctgcgacactgtgtcaaaagatccggggggatggacttcctcctggct
ttaagcaggggcatgtacagctgttgccagtttgaggatgagacagcaccaggagggggt
accagcactttgcctcaataccacactgtgaccaccatgcccactgccccgcaacagcac
cttgtcacagccacagttaacaacacaactgccattgccatggtccaacaacagcagaaa
catcatcaacagccatcagggcagacctataccaccatgctacctggctcaccgcccacc
acgggacattctgcagtggcattgggtccctcgaatagtcccttactagagggccccatg
ccttgctccaccttcttgcctcgtcatgaccgcagactggctgtggtggatcgctggaac
agaccaaagcaagagaaagccatgagtggaggcaacagtgggggagtgggtataggagga
attgcaggaggaatcactgacctacaggccaaacagcagtaccagcagaacctgggacag
gcctggagcatgcaaagaggagcagggatagcatgtgatacaagtctagatgaatacaag
cgttactatggtcctatagatccagaagggcttggaagtaacaccgaccaacaggttggg
ggccttcagcagactccaaaagccaatcctcgaggcattaaagccttagggatgccacgc
gtgccccctaaagggatgcagcaaggtcaagcgcacttaatttctaagcctcctccacta
atgccatcctcgcctagaaggcctcccttctggagacgaggaagccttgcacaggcaaga
agaaaaggctcagggggtcccttatatgagaatatccttcctttaggaaggcgaggaggt
ggaagatatggggcaaatgatggaggtagaaaaaggggacgccacccccttccacctcct
cctctcccagttcccctgtcatctccaactcataccccaacaactccctcctctccgtgc
cgtttctactcatcctgctccagtgcctcatcttcctcctcctcttcttcatcctcatct
tcttcttcatcttcagtatcactttctcgatcaaattccccctcttcttgctccagtgac
agctcctacaactcgtccttgagtttccgttatcgggcagggaaccgcgactttgtagta
gatgatgagggtgactcagatttccttacagaagaatccagcctcttgctgggatcaaag
aaaaaggttcgctcccgtcgaatgtcatcccgttcactgccatgcagccccccacctcca
ccgatccctccacgaaagccccgtcctcagagggattacggcagggacagaactggcagt
cagctggcccagcttcaagagtggtgggcctcttgggctgacagagaaagaggaaggagg
agttcaacaagccgaggtgatggggaggtgagtagggaggagaagaggcaccacaaagaa
agagagcgcgagagaaagagaaggaagaagggccgaaagaaaaagaagagagaagacagg
gaaagagaaagagagcgaaaacgacgcaaaacaaaaaagaaaagaaaaaaagaggacaag
actagaaagagggagcagaaaaggtctgagcaggagggaggagagccagataaaagagaa
gaactcaaatcagggacaccagaattcccaccatacccatctttgagacgacagtctttt
cggaaaaagagtgagagctcaatcagaagctatggatggaacatcccaggtgaaaatgaa
agaaaagaaagagaagaaaaggagcgtgatgatggagaagacagcaagggaaaggagaga
catcacagaagaaggaacagtaagcattatcatagttcaagtagtaagccttctacatct
gtgaaattttggggagggggcaacccttcttctgatgcaactccatctgcttttttgccg
ctattacccacctcttctaaaagacggaagagtaaaagttcagacagagatgctgtgggg
atggaaggagagagaaggccattgttaggaaggaatgaccgagctgaattgcactcaaag
gaagggttgtccttccatgagtgggagtctgcagcagagaatgtggtagacgaatcagaa
acagagatgaggaaaacagaacatgggaagagacacagaggaggaaggactacatctgat
gaagagcgagaacgtgataaggtggttggaatatattctgatgatgatggctcttcagga
gaatttgggaaatttgagaggtactgggatgatcatgaaggcagggcagtaggggggatt
ggaggcggaggttggttcttcagcacttatccttcaagagacaaaacaggaagcatcaac
agcagagatgatctgttcctggagagaggagaaaggtggggaacagcagaaagtgggtgg
agttcaagtgcagttggaggtggcggtgaagaaaggggctggggatcaggttcacactgg
cccccgcctcccctcacgccacctcctcctcgacgatattggtccgtggataagctccat
atacaggatgagaagaagagtaagcgcaagtcaaaggacaaaagcaaaggacacacaact
tgctcatcgtgccattcgcccagacatcacccgcactcctcaaaatgggcgcgttcggca
tcacgaagccaggaagagctgtaccgccactgtcaaagttttggtggtccgttaaagcca
aaacatgattcctcgtcctcatccaaacctgatcgatcccataatccctccaaaactggc
agccagtcaaacctcagtatccagcaaaggacacagagagtggacagggatcgcgagcga
ggaatacaaccatcgccaccttcgtctcttataccaaacttaccacccccactccctgcc
cttccagctcccccgtcctcatctcactcaatccacgttcctccccaaacctcgtcctcg
tctgtttcctcaccctcagtggtatcgtccgcaccgggagcaccacatgcctcctccatg
gcttcggcaagtgccaagttgcagtaccagagactgcgctccgtcccgcagccccagagg
tttcctcagtctcctcatttaccccttaaagccaagagcctttgctcacgaagggactca
gcacagttctcgagtgtggagagcgaagtctga
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integrated database retrieval system