Oryzias melastigma (Indian medaka): 112162461
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Entry
112162461 CDS
T07439
Symbol
celf3a
Name
(RefSeq) CUGBP Elav-like family member 3 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112162461 (celf3a)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112162461 (celf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_YTH1
RNA_bind
RRM_10
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
112162461
NCBI-ProteinID:
XP_024154011
Ensembl:
ENSOMEG00000007034
LinkDB
All DBs
Position
LG11:complement(26239827..26278010)
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AA seq
453 aa
AA seq
DB search
MKEPDAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES
ALKAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGS
IEECTVLRGPDGTSKGCAFVKFQNNAEAQAAINALHGSRTLPGASSSLVVKFADSEKERG
LRRMQQVASQLGVISPMTLHLGAYNAYTQALMQQQALVAQSAYLSPVATVAAVQMQQLAA
LNPSSIIATPIASITPSSGTSTPPSIAATPVPALPPPIAVNSYPSVPAPPSGQSATEALY
TNGVHAYQAQSPVLDPLQQAYTGMQHYTATYPAAYSLVGQPFPHQPALVAQQPQQPQQLQ
QREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPS
SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcccgacgcaatcaagctcttcatcgggcagataccccgaaacctggaggag
aaggacctgaagcccattttcgagcagtttggcaaaatctacgagctgacggtgataaag
gacaaatacacggggatgcacaaaggatgtgccttcctcacatactgcgcacgggagtcc
gccctcaaagcccagaatgcactgcacgagcagaagaccctaccggggatgaatcgacca
atccaagtgaagccggcggacagcgagagcagaggagaagacaggaagctgttcgtgggc
atgctgggaaagcagcagacggacgcagatgtgaggaagatgtttgagccgtttggcagc
atagaggagtgcacggtgctgcgagggcccgacgggaccagcaaaggttgtgcgttcgtg
aagttccagaacaacgcggaggcccaggccgccatcaacgctctgcacgggagccgcact
ctacctggcgcctcgtccagcctggtggtgaagttcgcagattcggagaaggagcggggg
ctcaggcggatgcagcaggtggcgtctcagctgggggtcatcagtcccatgaccctccac
ctcggggcctacaacgcctacacccaggcgctgatgcagcagcaggccttggtcgcccag
tcggcctatctctctcccgtcgccacggtggcagcggttcagatgcagcagctcgccgcc
ctcaaccccagcagcatcatcgccacgccgatcgcatccatcaccccgtcctcaggtacc
agcactcctccctccatcgccgccaccccagttcccgctctgcccccgcccatcgccgtg
aacagctacccgtctgtgccggctccccccagtggccaatcggcgacagaagccctctac
accaacggggtccacgcctatcaagctcagagtccggtcctggaccccctgcagcaggct
tacaccggcatgcagcactacacagccacctacccagcagcctacagcctggtggggcag
ccgttcccccaccaacccgctctggtggcgcagcagccgcagcagccgcagcagctccag
cagagagaaggtcccgagggctgcaacatcttcatctaccacctgccgcaggagttcacc
gactcggagatcctgcagatgttcctgccctttgggaacgtcatctctgccaaggtcttc
gtggaccgagccacaaaccaaagcaagtgcttcggttttgtgagcttcgataacccgtcc
agcgctcagacggccatccaggccatgaacggcttccagataggcatgaagaggctgaag
gtgcagctgaagaggcccaaggacgccaacagaccgtactga
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