Oryzias melastigma (Indian medaka): 112162477
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Entry
112162477 CDS
T07439
Symbol
snapin
Name
(RefSeq) SNARE-associated protein Snapin
KO
K20002
SNARE-associated protein Snapin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112162477 (snapin)
Membrane trafficking [BR:
oml04131
]
SNARE
SNARE associated proteins
Others
112162477 (snapin)
Endosome - Lysosome transport
Arf GTPases and associated proteins
BLOC-one-related complex (BORC)
112162477 (snapin)
Others
BLOC-1 complex
112162477 (snapin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snapin_Pallidin
Laminin_II
DUF3496
Methyltransf_32
WHD_E2F_TDP
PTRF_SDPR
DUF1664
SpmSyn_N
Motif
Other DBs
NCBI-GeneID:
112162477
NCBI-ProteinID:
XP_024154017
Ensembl:
ENSOMEG00000008619
LinkDB
All DBs
Position
LG11:complement(17387783..17389237)
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AA seq
133 aa
AA seq
DB search
MVTNMASVAVVETSSGKDVLAEGLLDLLKPAIQQLDLHVHSVRESQVELREHIDNLATEL
CRINEHQKVTLDLDPYVKKLLNARRRVVLVNNILQNAQERLRRLNHNVAKETARRKTMLE
ASGVFTPRSPSKP
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggtcacaaacatggcttccgtggctgtagtggaaacctcttcaggtaaagatgttctg
gcagaaggattgttggaccttctcaaaccagctatccagcagctcgatctacacgtgcac
tcagtcagggaaagtcaagtggaattacgagagcacatagataatttggccacagagctg
tgtaggataaatgagcaccagaaggtaaccctcgacctggacccatatgtgaagaagctg
ttgaacgccaggcggagagtagtgttggtgaacaacatcctgcagaatgctcaggagcgt
ctgaggagactcaaccataacgtggccaaggagacggcacggaggaagaccatgctggaa
gcctccggcgtgtttaccccccgctctccgagtaaaccctga
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integrated database retrieval system