Oryzias melastigma (Indian medaka): 112162540
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Entry
112162540 CDS
T07439
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112162540
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
112162540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
zf-CW
DAO
Pyr_redox_2
Thi4
HI0933_like
Pyr_redox_3
Pyr_redox
FAD_oxidored
FAD_binding_3
FAD_binding_2
Lycopene_cycl
AlaDh_PNT_C
GIDA
NAD_binding_9
2-Hacid_dh_C
TrkA_N
KARI_N
Attractin
MurD-like_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
112162540
NCBI-ProteinID:
XP_024154108
Ensembl:
ENSOMEG00000018643
LinkDB
All DBs
Position
LG11:13951240..13960916
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AA seq
829 aa
AA seq
DB search
MLSDADCPGNASGARRARKRSSGESPGEGQTLRSSRRQKRTNNPPPGQSKRKATDTEEED
DQSEKKYRKCEKAGCSAVYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSH
KDGYETFAEWKKVWTSNGKSEPSLKAFMADQQLPFWVQCTKPDCRKWRQMTKEAQLTPAL
AETYRCGMKYNNIKIEGPDQCSQPEDLRVAEVSDSWWHSMLILPPLLKESPASPFLAAYY
PDCVGMSPSGSSSSVSSSEVKADPHRTVHPQISGLSQYFQPFYQPNECGKALCVRPDMME
LDELYEFPEFSRDPTMYLALRNLILASWHRNCKKVLTAEKCSQHIIVRGLVRVRCVQELG
RVLHFMTKKGLVNTGVLRVERPLLPEGYRSKNVIIIGAGASGLAAARQLQNFGTAVVVLE
ARDRIGGRVWDDTSLGVMVGRGAQIVNGCVNNPIALMCEQMDIKMHKLGERCELFQKGGQ
ATDPAIDKRMDFHFNAILDVVSEWRKDKSQSQDTPLGEKVQEVKKNFLQESGIQFSELEE
KVLQFHLSNLEFACGSTLDKVSARSWDHNEFFAQFSGDHTLLTKGYYALLHKLAEGLDIC
TNCPVEAIDYSGETVKVISSNGSQWTAQKVLVTVPLILLQKNLIHFNPPLPERKLKAIHS
LGAGIIEKIALQFPCRFWDKKIQGADYFGNIPPVPEKRGMFSVFYDLDPQGKNAVLMSVI
SGDAVAAVRDMEEKDVVNECMKVLRELFKEQEVPEPVNYFVTHWSKDVWSQMSYSFVKTG
GSGEAYDILAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKMTAV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgctatcggatgcagactgccctgggaacgcctctggggctcggagggcgaggaagagg
agctccggggagtctccgggggagggccagaccctgcgctcctccaggagacagaaacgg
accaacaatcccccacctggtcagagtaaaagaaaagccacagacacggaggaagaagat
gatcagtctgagaagaagtacagaaaatgtgagaaggctggatgctccgccgtgtaccca
gtttgttttgcaagtgcatcggaaaggtgtgcaaaaaacggatacacatcgcgctggtat
catctgtcgtgcggcgagcatttctgcaacgagtgttttgatcactactatagaagccac
aaagatggctatgagacctttgccgaatggaagaaggtgtggactagtaacgggaagagt
gagcccagtctgaaagccttcatggccgatcaacagctgccattctgggttcagtgcact
aaaccagactgcaggaaatggcgccaaatgactaaggaggcccaacttaccccagctcta
gcagaaacgtaccgctgtggaatgaagtacaacaacattaaaattgagggaccagaccag
tgctcccagccagaagacttgagagtggctgaggtcagcgacagctggtggcattccatg
ctgattttaccgccgttgcttaaagaaagtcccgccagccccttccttgccgcctactat
cctgactgcgtgggaatgagtccgtccggctcttccagctctgtgtcgtcatccgaggtg
aaggcagacccccacagaactgtgcacccacagatttcaggcctgtctcagtactttcag
ccgttctaccaacctaacgagtgcggtaaggcgttgtgtgtgcgtccggacatgatggag
ctggatgagctgtatgagtttccagagttttccagggatcccaccatgtatctggctctg
cgtaatcttattctggcctcctggcataggaattgcaagaaagttctgactgctgagaaa
tgctctcagcacatcatcgttcggggtttggtgcgcgtgcgctgcgtgcaggagttgggc
cgggtgcttcatttcatgacgaaaaagggcctcgtcaacactggtgtgctgagagtggaa
cggcctctgcttcctgagggatatcgctcgaagaacgtcatcatcattggtgctggggcc
tcaggactggctgctgcgcggcagcttcaaaacttcggcactgcagtggtggtgcttgaa
gcaagggacaggattggaggccgggtatgggatgatacctctttgggcgtcatggtgggc
cgaggtgctcagatcgtcaatggatgtgtcaacaaccccattgcactcatgtgtgagcag
atggacatcaagatgcataaactgggggagcgatgtgagctgtttcaaaagggcggtcag
gccactgaccctgccatcgacaagcgcatggacttccacttcaacgccattctggatgtg
gtgtcagaatggaggaaagacaagtcgcagagccaggacactccacttggagaaaaggtt
caggaagtgaagaaaaactttctccaggaatctgggatccagttcagtgagctggaggag
aaagtgttacagtttcatctcagtaatctggagttcgcttgtggaagcacactagacaag
gtgtcagcacgatcctgggaccacaacgaattttttgctcagttctcaggtgaccacact
ttactcactaagggctactatgctttgctgcacaagctggccgagggcctggacatctgc
acaaactgtccggttgaggctatcgattactcgggtgaaactgttaaagttatatcctct
aatgggtcccagtggacagcgcagaaggttcttgttactgtcccgttgattttacttcag
aagaacctcattcatttcaatcctcctcttcctgagagaaaactcaaagcaatccacagt
ttaggagctggtatcatagaaaagattgctctccagtttccgtgtcgattttgggacaaa
aagattcaaggtgcagattactttgggaacatccccccagttcctgaaaagagaggcatg
ttcagtgtcttctatgacctggatcctcagggaaagaacgctgtactgatgtccgtcatt
tctggtgatgctgtcgccgccgtccgggacatggaggagaaggacgtggtcaatgagtgc
atgaaggttttgcgagaactcttcaaagagcaggaggttccagagcctgtaaattatttt
gtcacgcattggagcaaagacgtgtggtcccagatgtcctacagctttgtgaagacgggg
ggcagtggagaggcctacgatatcctggccgaagatgtgcagggtaaagtcttcttcgct
ggagaggccaccaaccgacactttcctcagactgtgacgggggcctacctcagcggagtc
cgagaagccagcaagatgactgccgtataa
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