Oryzias melastigma (Indian medaka): 112162556
Help
Entry
112162556 CDS
T07439
Name
(RefSeq) zinc fingers and homeoboxes protein 1
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112162556
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112162556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Homez
zf-C2H2_7th_ZNF462
HTH_72
zf-H2C2_5
zf-C2H2_ZNF462_11
LemA
Motif
Other DBs
NCBI-GeneID:
112162556
NCBI-ProteinID:
XP_024154130
Ensembl:
ENSOMEG00000012265
LinkDB
All DBs
Position
LG11:complement(22114514..22125635)
Genome browser
AA seq
942 aa
AA seq
DB search
MSSRRKSTTPCMVPPREAMESDLEMEDMLDEADPEDRNGLGTFSSEVPVLMEDQGEDSDF
RSDAVSDPYLDLNTAEGGYECKYCSFQTSELNQFTMHVDAEHPDVVLNTSYVCVECDYHT
KSYDTLLTHNARFHPGEDNFTRTMVKRNNETIFQQTVNDLTFDGSFIKDEEDELEDTSRK
VIPLSKTPIMRIKSRPEPKKFTITQKMALGDVIKVESDDEEEFEEDEDREPPSLSPAPMN
LSAAITPRLIPVSTPLQVQAVPQSIVVNTPNMLQIKGGSSGGGAVLPPETLAQVLSALQN
QQNSSQTQLLIPISSIPTYNTAMDNNVLLIGAYNRFPYPSVSEITGLSSQTKFSEEQIKV
WFSAQRLKHGVSWTPEEVEEARRKKFNGTVQSVPQTITVIPANIAAATNGLQSIFQTCQI
VGQPGLVLTQVAGNSSSVPVASPVTLAVAGVPGKQPKAAEPSVSEASTEMLASPTSASLS
LDASGSKPKKSKEQLAELKASYGRRQFATEAEISRLMQVTKLSKRAIKKWFSDTRYNQRN
SKEHHSLLLGEPVPSRTGRGRGSSSGLGENVGSDGTATIVIDSSDDASDASPTSNNAQGS
SGSTSSPRVKFRNALPDFTPQKFKEKTPEQLLVLEASFQSSDKPSDEELNRLRAETKLTR
REVDAWFTERRKLPLLKGSEPGREAERLRAAHAPSSSAHAPLSRKAIKKTPEQINVLKKA
FVRTQWPTPEEYDKMAEESGLPRSYIVTWFGDARYACKNNNLKWYYLYQCGKVEEAFNGG
TRTPKKPRKRFRLGSRRTRRPYACKRSPQGGAGVIKVKSGKEFLKDYYLKHRALSEKDLD
DLVTKSSMSYEQVRDWFSETARRVEAGKEAFSGEEEEAEEEEEEEEATAECAESEGEMEV
KEQGEETKETGEKEDGCEMEEEGQLQGGEDVCQSQPTAEEQT
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaggaggaaatccacaaccccctgcatggttcctcctcgggaagccatggaa
tcagatctggagatggaggacatgttggatgaagcagacccggaggacagaaacggactg
gggacgttttcctccgaggttcctgttctgatggaggaccaaggcgaggattctgacttc
cgatcggacgcggtgtcggacccctatttggacctaaacacggcggagggaggctacgaa
tgcaagtactgcagtttccagacgtcggagcttaaccagttcaccatgcacgtggacgca
gaacatcccgatgtggttctcaacacctcatacgtctgcgtggaatgtgactaccacacc
aaaagctatgacacccttctgacccacaatgcccgcttccacccgggtgaggacaacttc
acgcggaccatggtgaagcgaaacaacgagaccatcttccagcagacggtcaacgacctc
acttttgacggcagcttcatcaaggacgaggaggacgagctggaagacacgtcccgcaaa
gtcatccccctcagcaagacccccatcatgaggatcaagagccgaccggagcccaaaaag
ttcaccatcacgcaaaaaatggccttaggtgatgtcattaaagtggagagcgacgatgag
gaggagttcgaggaagatgaagacagagagccgccgtcgctatcgccagcgccgatgaac
ctctctgcggccatcacccctcgcctgattcccgtctccacgccgctgcaggtgcaggcc
gtcccacagagcattgtggtaaacacccccaacatgctgcagattaaaggcggctccagt
ggggggggtgccgtgctgcctccagagaccctggcccaggttctgtcggccctgcagaac
cagcagaacagctcgcagacgcagctcctcatccccatcagcagcatccccacctacaac
acggccatggacaacaacgttctgctgatcggtgcctacaaccggtttccatatccatcc
gtctcagagatcacaggtttgtcctcccagaccaagttcagcgaggagcagatcaaagtc
tggttttcagctcagaggctcaagcacggagtcagctggacgcccgaggaggtcgaagag
gcgaggaggaaaaagtttaacggaacagtccagtctgtccctcagaccatcaccgtcatc
ccggccaacatagctgcggccacaaacggcctgcagtccatcttccagacgtgtcagatc
gtgggccagccgggcctcgtcctcactcaggtggccgggaacagcagcagcgtgcccgtg
gcgtctccggtcactctagccgtcgctggagtgccaggaaaacaaccgaaagccgccgag
ccgtcggtctctgaagctagcacagagatgctggcctcgcccaccagcgcctctcttagt
ttagatgcttcagggtcgaaacccaagaagtccaaagagcagctggcggagctgaaggcg
agctacggcaggaggcagtttgccacggaagcagagatctccagactcatgcaagtcacc
aaattatccaagcgagcaataaagaagtggttcagcgacacgcgctacaaccagaggaac
tcaaaggagcaccacagcttgctgctgggcgaaccggtacccagcagaaccggaagaggg
cggggcagcagcagcggcctcggagagaacgtcggcagcgacggcaccgccaccatcgtg
atcgactcaagtgacgacgccagcgacgcctccccgacatccaacaacgctcagggctcg
tctggatctaccagcagcccgcgggtcaaattccgcaacgccctcccggactttacaccg
cagaagttcaaggagaagacgccggagcagctgctggttctggaagccagcttccagagt
tcggacaaaccttcagacgaggagctgaaccgtctgcgcgcggagaccaaactcacgagg
cgagaggtggacgcctggttcacggagagaagaaagctgcctctgctgaaaggcagcgag
cccgggagggaggcggagaggctccgagcggctcacgcgccgtcctcctccgctcacgcg
ccgctcagcaggaaggccatcaagaagacgccggaacagatcaacgtcttgaagaaggcc
ttcgttcgcacacagtggccgacgccggaggagtacgacaagatggcagaggagagcggc
ctgcccaggtcctacatcgtcacctggttcggggacgcgcgctacgcctgcaaaaacaac
aacctgaagtggtactacctctaccagtgcgggaaggtggaagaggcattcaatggaggc
actaggaccccgaagaaacccaggaagcggtttcgcctggggtccaggagaacgcgtcgg
ccttacgcctgcaaacgctcgccacaggggggcgctggtgtcatcaaggtaaaatctggt
aaggagtttctgaaggattactacctcaaacacagagctctgagcgagaaagatctggac
gatctggtgaccaagtccagcatgagctacgagcaggtgagggactggttctcagagacc
gccaggagggtggaggcgggcaaggaggctttcagcggcgaggaggaggaggccgaagag
gaggaggaggaggaggaagcgacggcagagtgtgcggagagcgaaggggagatggaggtg
aaggagcaaggagaagagacaaaagaaacgggtgagaaagaggacggctgtgaaatggag
gaggagggccagctccaaggaggagaagatgtctgccaatcccagccgacagcagaggag
cagacatga
DBGET
integrated database retrieval system
