Oryzias melastigma (Indian medaka): 112162579
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Entry
112162579 CDS
T07439
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112162579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112162579
03036 Chromosome and associated proteins [BR:
oml03036
]
112162579
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112162579
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112162579
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112162579
Noncanonical PRC1 (PRC1.1)
112162579
Noncanonical PRC1 (PRC1.3/1.5)
112162579
Noncanonical PRC1 (PRC1.6)
112162579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_5
zf-RING_6
RING_XB3-XBAT31
zf-RING_4
zf-rbx1
DUF6555
zf-UDP
TRAF3_RING
zf-C3HC4_5
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112162579
NCBI-ProteinID:
XP_024154161
Ensembl:
ENSOMEG00000011404
LinkDB
All DBs
Position
LG11:complement(22488074..22494302)
Genome browser
AA seq
396 aa
AA seq
DB search
MAAPINIQTPSKTWELSLYELHRTPQEVIVDGTEVAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSECIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QRSVLERLNRLHNKEALSSSIEEGLRQQARYRSERNHRVKKPTQESDNTTFSGGEDNGDS
RSHLSHDSAPSNAPHPRGQTPPEAGPSRKRGRASDDGSGPEADSGSPTPPLRRRKEGPAS
EIELVFRPHPQLVHAQDYNQTRYVKTTANATVDHLSKYLALRIALEDRRADGEAEDRARE
EAGGEERGGTEGKGETEGPSKSGEGTSLNNISEKQYTIYIMTRGGQFSTLNGSLTLELVN
EKYWKVRKPLELYYAPTMDQQQPQPQQKSPPPQKEG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacccataaacatccaaacccccagtaagacatgggagctgagtctgtacgag
ctgcaccgaacccctcaggaagtcatcgtggacgggacagaggtagcggtgtctcctcgc
tcgctgcacagtgaactgatgtgtcccatctgcctggacatgctgaagaacacaatgacc
accaaagagtgtctgcaccgcttctgctctgaatgcatcgtcacagcactgcgttctgga
aacaaagagtgtccgacctgcaggaagaagctggtctccagacgatcgcttcgcagagat
tccaacttcgacgcgctgatctcgaagatttacccgagccgcgacgagtacgaggcccac
cagcgcagcgtcctcgagcggctcaacaggctgcacaacaaggaagcgctgagctccagc
attgaggaaggcctccgccaacaggcccgctacaggtccgagaggaaccaccgtgtgaag
aaacccactcaggagagtgacaacaccacgttcagcggcggcgaggataacggagattct
cgttcccacctgtcccacgactccgccccttcaaatgcccctcacccccgcggccaaacc
cctccggaggccggaccgagccgcaagcgggggcgcgcctctgacgacggctcggggccg
gaggcagacagcggcagccccaccccccctctgagacggcgcaaagaagggccggcgtca
gagatcgagctggtcttcaggccacacccacagctggttcacgcccaggattacaaccag
accagatacgtgaagaccacggccaacgccaccgtggaccatctctcaaagtacctggcg
ctgcgcatcgctcttgaagacaggcgggctgacggagaggcagaggaccgagccagagag
gaagcaggaggggaagagagaggaggaacggagggcaaaggggaaacggagggaccctcc
aagagcggagagggaaccagtctgaacaacatcagcgagaaacagtacaccatctacatc
atgacgaggggcggacagttctctacactcaatggctctttgactctggagttggtcaat
gagaagtactggaaggtccgaaagcctctggagctctactatgctcccaccatggaccag
cagcagccccagccccagcagaagtccccacccccccagaaggaaggatga
DBGET
integrated database retrieval system
