KEGG   Oryzias melastigma (Indian medaka): 112162643
Entry
112162643         CDS       T07439                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112162643 (ubap2l)
   03400 DNA repair and recombination proteins [BR:oml03400]
    112162643 (ubap2l)
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    112162643 (ubap2l)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112162643 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_8 UBA_4 UBA_RAD5A GIP1_N CUE
Other DBs
NCBI-GeneID: 112162643
NCBI-ProteinID: XP_036070034
Ensembl: ENSOMEG00000006074
LinkDB
Position
LG11:26774324..26797901
AA seq 1199 aa
MMTSMGGNRARGSWEQTQGQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLV
DITGKDQDESMIALHDCNGDLNRAINVLLEGNPDTDSWEMVGKKKGVSGQKEISQAETCE
EGKENREKGAEKDPARRRGGAPRRSRGTSRGRDFRSQENGLDGGKAAVTGRGAERGRRGR
GRGRGAVGLAGRRGGRFSAQGMGQIYKESRYDLTGEERTFNPADYAEPAQTEDSYGGGST
WNNTGSAELDEGSRLEYPGGEGTNYPPKFDSAPGAWRSATEEWGTEDWNEDLSETKIFTA
SSVASVPLPQENVTITKGQRIDLAVLLGKTPPSSSSETENAPMEPPHPPSLSQSLVFSNS
KQGAPLSQSSSSAPYSQHSMGSMLSKGFGDVDPKGGSTGTTGSQFLEQYKTAQALAQLAA
QHSQSGATSTAPSSWDTGSGPLGQFDMKAPAESGIHSPFTKRQPYQAATSASSMLDVFLQ
DKGLPASSSSLPQHSSSSPHSVPSPALSKMGSMTSAGHQVSPGSSEVQGSSPLPLQQHKL
KQQKKKTSLTTKIPVMAVEMPGSADISGLNLQFGALQFGSEPVLQEYESSPATTTPSNQG
QNSLYTAPSSDSTSALSGSNQMDIYDQRAPPPRRYPPSVSSSPQKDMQPKNGFSSMQAAQ
SVEAAAGPAAAVKSSDSVAQTCVSGMGSLADGGPASSLLTTSNQASLGVLGHAEDLPPSS
ISSQQNSAHPSQQNSLPSSSGRTSSSSILHPDADSTLHSSFPPVPAVPSSSVPSSSSSVA
AAQVSLGVPQGSSVGPATVSAPSGLGPVSGLAMGLGAASMGAPAAVPASVLVSTASSSIP
SSVTSSSTRSSAASSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTR
IPLDYYSIPFPTPTTALTGRDGSLTSNHYSGELAKFGRGDASSPAPATTLAQTQQSQTQT
HHTTQQPFLNPGLPPGYSYPSLPYYTGMPGLPNTFQYGPAVFPVAPTSSKQHGVNVGVNA
SATPFQQASGYGSHGYSTGYEDVGQASGSGDFCKGGYGTAVAAAASAQNKPASSVTGPGV
GVSVTSSNTGVPDISGSVYTKTQSFEKQGFHAGTPAASFSLPSALGSGGPINPPAAAGYA
PAPFMHILAPHQQPHSQILHHHLQQDGQSGSGQRSQNASLQQKSQINKSAYNSYSWGAN
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgatgacatccatgggcggaaaccgggcccggggcagctgggagcagacacaggggcaa
acacagagccagacacagcacaagcagaggcctcaggcgactgcagagcaaatccgactc
gcacagatgatttcagaccacaacgatgcagactttgaagagaaggtcaaacagctggtg
gacatcacagggaaggatcaggacgagtccatgatcgcgctgcacgactgtaacggagac
ctgaacagagccatcaacgtgctgctggaggggaaccccgacacggactcctgggagatg
gtgggtaagaagaaaggcgtgtcgggtcagaaggagatcagccaggcagaaacctgcgag
gagggaaaggagaaccgcgagaaaggagccgagaaagaccccgcccgccgtcgaggcggc
gcgccgcggagaagccgtggaaccagcagaggacgggatttccgcagtcaggagaacggg
ctggacggagggaaggctgcagtcaccggcagaggggcggagcgaggccgaagggggcgg
ggcagaggaagaggagcagtcgggctggctggacggcgaggaggccggttttcagcgcag
ggcatgggccagatttataaagagtccagatatgatttaacaggagaggagagaaccttc
aaccctgcagactatgcagagcctgcgcagacggaggacagctatggcggcggcagcacc
tggaacaacacggggagcgccgagctggacgagggatcacggttggagtaccccggggga
gaggggaccaactacccaccaaagtttgattctgcccccggtgcctggcgttctgccaca
gaggagtgggggaccgaagactggaatgaagatctttcagagactaaaatctttacagct
tccagcgtggcgtcggtgcctctgcctcaggagaacgtgaccatcaccaaaggacagagg
atcgatctcgcagtgcttctgggaaaaactcctccttcttcctcctcggagacagaaaat
gcccccatggagcccccccaccccccctccctgtcccagtcactggttttcagcaactcc
aagcagggcgcccccctgagccagtcgtcctccagcgccccctatagccagcacagcatg
ggcagcatgctgagcaaaggcttcggggacgtggacccgaaaggaggcagcaccggaacc
accggctcccagttcctggaacagtacaaaacggcccaggcgctggcccagctggccgct
cagcactcccagagcggggcgaccagcacggcgccgtcgtcctgggacaccggttccggt
ccgctgggacagtttgacatgaaagctccagcagagtctgggatccactccccctttacg
aagcggcagccgtaccaggccgccacgtccgcctcgtccatgttggacgtgttcctgcag
gacaaagggctgccggcgtcctcgtcctctctcccacagcattcctcgtcctcgccccac
tctgtgccatcgcccgctctctccaagatggggtcgatgacgtcggcgggtcaccaggtg
tctcccggatcctcggaggtccagggttcgagtccgctgcctctgcagcagcacaagctg
aagcagcagaagaagaagacgtctctgaccacgaagattccggtcatggccgtggagatg
cctggatcagctgacatctcgggcctcaacctgcaatttggagctctgcagtttggttct
gaaccggttctacaggaatacgagtccagcccggccacaaccaccccgagtaaccagggt
cagaacagcctctacaccgcccccagcagcgactcgacctccgccctctccggctccaac
cagatggacatctacgaccagagagctcctccaccacgccgttaccccccctccgtctcc
tcctccccccagaaggatatgcagcccaaaaacggtttcagctccatgcaggccgctcag
tctgtggaagctgcagcaggccctgcagcagcagtcaagagctccgactcggtcgctcag
acctgcgtctcaggcatgggctccctggcggacggcggccccgcctcctcgctgttaacc
acgtccaaccaggcgtctctcggtgttctggggcacgctgaagacctgccgccgagctcc
atcagctcccagcagaacagcgctcacccgtcacagcagaacagcctcccctcgtcttca
gggaggacgtccagctccagcatcctccatcccgacgccgactccaccctgcactcctcc
ttcccccctgtgccagcggtgccatcttcctcggtcccttcctcctcctcctctgtggcg
gctgcacaggtgtcgctgggcgtccctcagggctcctccgtgggccccgccacggtctcg
gccccctctggtctgggccccgtcagcggtttggccatggggctcggcgccgcctccatg
ggcgccccagcagcagtccccgcctccgttttagtttccacggcgtcgtcgagcattcct
tcttcagtgacatcttcctccacacgcagctctgcggcgtcctcagggaaagcccctccc
aacctgccgccgggggtgccccctctactgcccaacccgtacatcatggctcccggactg
ctgcacgcctatcccccccaggtgtacggctacgacgacctccagatgctgcagaccaga
atcccgctggattactacagcatcccgttcccgacccccaccaccgcgttgaccggaaga
gacgggagtctgaccagcaaccactattctggtgaactggccaagtttggccgaggcgac
gcctcctctcccgcccccgccaccacgttggcccagacgcagcagagccaaacccagacg
caccacaccacccagcagcccttcctcaacccgggactgccccccggctacagctacccc
agcctgccctactacaccggcatgccgggcctccccaacaccttccagtacggacctgct
gtgtttccggtggctcctacctcgtcgaagcagcacggcgtgaatgtcggcgtcaacgcc
tcggccacgcccttccaacaggccagcggctacggttcccacggctacagcactggctat
gaggatgtgggccaggcttcagggagtggggatttctgtaagggcggatacggcactgcc
gtggccgccgccgcttccgcacaaaacaagccagccagctccgtcaccgggcccggagtc
ggtgtttctgtgacatccagcaacacgggggttcctgacatttcaggatctgtttacaca
aagactcagtcatttgagaagcagggtttccacgcgggaacgccggcggcttccttcagc
ctgccctcagccctggggagcggggggcccatcaaccccccagccgccgcgggctacgcc
cccgccccctttatgcacatcctggccccccaccaacagccccactcccagattctgcac
caccacctgcagcaggacggccagagcggcagcggccagcgcagccagaacgcctccctc
cagcagaagtctcagatcaacaagtccgcgtacaacagctacagctggggggccaactaa

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