Oryzias melastigma (Indian medaka): 112162644
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Entry
112162644 CDS
T07439
Symbol
cgnb
Name
(RefSeq) cingulin isoform X1
KO
K06102
cingulin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112162644 (cgnb)
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GFIT
Motif
Pfam:
Myosin_tail_1
CCDC39
NOCA1_mid
Sos7
OVT1
LEKR1
Motif
Other DBs
NCBI-GeneID:
112162644
NCBI-ProteinID:
XP_024154248
Ensembl:
ENSOMEG00000006237
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Position
LG11:26724759..26743352
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AA seq
1160 aa
AA seq
DB search
MSTLSPDRKPHVDYGVQIRFIKDLHDTGGGFPDKSKGSGGATPPSNKYGVAVRVQGISGQ
PYVVLKDGDKGDSYGVQLTTPTPEGYHTLPKRKDPAEAPKRFGPAENAPRSPAPPTEEED
GEMFGSPLRRPPGDGQAGTQGEEERGGGRSRDGERPKSEQPKPAFNRTEQRPDRTAPEEY
NEAGLKPVRSSTLGPRKFTPSAPSLTSSLGRYRDNKLPPPSPELLPEPPGEPAAIDTKSL
APINKLISKFNSGTPGGDATPTRGRTGARQRLDFDQRTRSRSLDARKNSEPEVLLPPSSS
VDPDEEAPPPSFTPLRSSAPAKGSSGIGPSATTKVTAPVGLRAGLSPPEKSTVKETVSAT
KPVIPSKSFLQNADAADAGADADKDPLKRAVYGIRKDGDSDVSLKRKVDVVCDPADSLKS
GSDGFIPAPTLEEQLKFCKKELQQTQNELSAEHQAREAAESRLLLQEDQLAQLQEELRRL
SEISPQTGSMQTDVVVLQAKLAEVTVLQQRQEEVLRQRERELTALKGALKEEVECHDKEM
ESLREQYSQDMEALRRTMEQFSQSQEQIEEERERVNASVSMLEEELESSKDQGERWRAEL
QAVTEEKRIPRGRHPLKKSHLEQKKVEEELKDLQESQPSTDESRALKDELRRCHDDLKQT
RAHLDRQKAELEQRHEALDGLKKASGEKEAELQAEIRRLKEQSEKDKEELQRVKEASLDH
SAALELQETNLRLKERLARMSKLPRSSEPSEELEALEDENRALKSQLEDAKRGASRLTKE
RDELGRRLEERELEREALRKGKVDLEEQKRQLDRALEKITKEMEMMMSDSRQSVSALQTQ
LDDFRERSRKELLEAQRSGKDRQAELQRVQAGLKGQQEEVSRLKKELLTCSEDRDSAQLE
RDLLSNRLKHLESELESERSSQSDRTREIRGLEDKIKTLEIELDEERTSVELLNDRISRS
REQVDQLRSELMQERSARHDLEMDKSVLERQVKELKSRVADMEGQTRPSAGVSLLESKLQ
EMEDRLRSEEREKATIQASLRRTERKLKEVTTTLDQERSQHTEQRDQLSLRVKGLKRQVD
ESESEVERLEGVRRKILRELEEQQELQEALQAKVTSLENEQKRKSQHSYRPALTSTFSSE
EEDAPYDASISSILAESSSC
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctgtcccccgacaggaagccgcatgtggactatggcgtccagatccgcttc
atcaaagacctccacgacacaggtgggggcttccctgacaaatctaaggggagcggcggt
gcgaccccgccctccaacaagtacggcgtggccgtgcgggttcagggcatctcgggtcag
ccctacgtggtccttaaagatggagataaaggagactcgtatggcgtgcagctaaccacc
cccacccccgaggggtaccacacccttcccaaacgaaaggacccggcagaagcccccaaa
cggttcggcccggcggagaacgcgccgcgctccccggctccacccaccgaggaggaagac
ggggagatgttcgggagtcctctgaggcgacctccgggggatgggcaagcaggaacacaa
ggggaggaggaacgaggaggtgggaggagcagagacggggagcgccccaaatctgagcag
cccaaaccagcgttcaacagaaccgagcaaagaccggaccggaccgctccagaggaatac
aacgaagcaggactgaaaccggtccgctccagcactctcgggcccagaaagttcaccccc
agtgcccccagcctcaccagctctttggggcggtaccgggacaacaagctgcctcccccc
tccccggagctcctcccagaacctcctggagaacctgccgccatcgacaccaagtctctg
gctcccatcaacaaactcatcagcaagttcaacagcgggacgccggggggcgacgccacg
ccgacccgcggccgcaccggagcccggcagaggctggacttcgaccagcgcacccggtcc
agaagcctcgatgcaagaaagaactctgaaccggaagttctgctgcctccatcttcctct
gtggacccggacgaagaggctccgcccccatccttcactcctctgaggtcatcagctccg
gctaaaggaagctcaggaattggaccgtcagccacgaccaaggtgacggcgcctgtgggc
ctgagggcggggctcagtccgccagagaagtccaccgtcaaggagacggtttctgccaca
aaacctgtcattccttcaaagagtttcctccagaacgcagacgctgcagacgcaggcgca
gacgcagacaaggatccgctcaaacgggccgtctacggcatccggaaggacggcgacagc
gatgtatccctgaagagaaaggtggacgtcgtgtgtgatcccgccgacagtctgaagagc
ggatcggacggattcatcccagcgccgactctggaggagcagctgaagttctgcaagaag
gagctgcagcagacgcagaatgaactgtctgcagagcatcaggccagagaggcagccgag
tcgcggctgctcctgcaggaggaccagctggctcagcttcaggaggagctgaggagactc
tctgagatctcccctcagacgggctccatgcagacggacgtggtggtcctgcaggcgaag
ctcgccgaggtcaccgtgctgcagcagcgccaggaggaggtgctgcgccagcgggagcgg
gagctgacggccctgaagggagcgctgaaggaggaggtggagtgccacgacaaggagatg
gagagtctgagggagcagtacagccaggacatggaggcgctgaggagaaccatggagcag
ttctcacagtcccaggagcagatcgaggaggagcgcgagagggtgaacgcctcggtgtcc
atgctggaggaagagctggagagcagcaaagaccagggcgagcgctggagggcggagcta
caggccgtcacagaggagaagaggattcctcgcgggcgccatccactcaaaaagtctcat
ttggagcagaagaaagtggaggaagaactgaaagatctgcaggaatctcagccttcaaca
gatgagagccgggcgctgaaagacgagctccggcgttgccatgacgacctgaagcaaact
cgcgcccatctggaccgacaaaaggccgagctggagcagagacacgaggcactcgacggt
ctgaagaaggcgagcggagagaaggaggcggagctgcaggccgagatccgccgtctgaag
gagcagtcggagaaggacaaggaggagcttcagagggtgaaggaggcgtctctggaccac
agcgccgccctggagctccaggagaccaacctccggctcaaagagcggctggcccgcatg
tccaaactccctcggagctcggagcccagcgaggagctggaggccctggaggacgagaac
cgcgcgctcaagtctcagctggaggacgccaagcgaggcgccagccggctgaccaaggag
cgggacgagctgggccgccggctggaggagcgggagctggagcgggaggcgctgaggaag
gggaaggtggacctggaggagcagaagaggcagctggaccgagccctggagaagatcacc
aaggagatggagatgatgatgtcggactcccggcagtcggtcagcgccctgcagacgcag
ctggacgacttccgggaacgctccaggaaggagctcctggaagctcagcggagcgggaag
gaccggcaggcggagctgcagagggtccaggccggcctgaagggccagcaggaggaggtt
tctcgtctgaagaaggagctgctgacctgcagcgaggaccgagacagcgcccagctggag
agagatctgctcagcaaccggctgaagcatctggagagcgagctggagtccgagaggagc
tcccagtccgaccgaacccgggagatccgaggtctggaggataagatcaaaactctggag
atcgagctggacgaggagcggaccagcgtggagctcctgaacgaccggatcagccgcagc
cgagagcaggtcgaccagctccgctcggaactcatgcaggagcgatccgccaggcatgac
ctggaaatggacaagagcgtcctggagcggcaggtgaaggagctgaagtcccgcgtggcg
gacatggaggggcagacacgcccctcggctggagtctcgctgctggagtccaaactgcag
gagatggaggaccgcctgcgcagcgaggaaagagaaaaggcgacgatccaggcgtctctg
agacggactgagagaaaactgaaggaggtgacgaccacgctggaccaggagaggagccag
cacacggagcagcgggatcagctgtccctgcgtgttaagggtctgaagcggcaggtggat
gagagcgagagcgaggtggagcgcctggagggagtccgccgtaaaatcctgagggagctg
gaggagcagcaggagctgcaggaggcgctgcaggccaaagtcacgtcgctggagaacgag
cagaagaggaagtcgcagcactcgtaccggcccgccctgacctccaccttcagctcggag
gaggaggacgctccctacgacgcctccatctcctccatcctcgccgagagcagcagctgc
tag
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integrated database retrieval system