KEGG   Oryzias melastigma (Indian medaka): 112162644
Entry
112162644         CDS       T07439                                 
Symbol
cgnb
Name
(RefSeq) cingulin isoform X1
  KO
K06102  cingulin
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112162644 (cgnb)
SSDB
Motif
Pfam: Myosin_tail_1 CCDC39 NOCA1_mid Sos7 OVT1 LEKR1
Other DBs
NCBI-GeneID: 112162644
NCBI-ProteinID: XP_024154248
Ensembl: ENSOMEG00000006237
LinkDB
Position
LG11:26724759..26743352
AA seq 1160 aa
MSTLSPDRKPHVDYGVQIRFIKDLHDTGGGFPDKSKGSGGATPPSNKYGVAVRVQGISGQ
PYVVLKDGDKGDSYGVQLTTPTPEGYHTLPKRKDPAEAPKRFGPAENAPRSPAPPTEEED
GEMFGSPLRRPPGDGQAGTQGEEERGGGRSRDGERPKSEQPKPAFNRTEQRPDRTAPEEY
NEAGLKPVRSSTLGPRKFTPSAPSLTSSLGRYRDNKLPPPSPELLPEPPGEPAAIDTKSL
APINKLISKFNSGTPGGDATPTRGRTGARQRLDFDQRTRSRSLDARKNSEPEVLLPPSSS
VDPDEEAPPPSFTPLRSSAPAKGSSGIGPSATTKVTAPVGLRAGLSPPEKSTVKETVSAT
KPVIPSKSFLQNADAADAGADADKDPLKRAVYGIRKDGDSDVSLKRKVDVVCDPADSLKS
GSDGFIPAPTLEEQLKFCKKELQQTQNELSAEHQAREAAESRLLLQEDQLAQLQEELRRL
SEISPQTGSMQTDVVVLQAKLAEVTVLQQRQEEVLRQRERELTALKGALKEEVECHDKEM
ESLREQYSQDMEALRRTMEQFSQSQEQIEEERERVNASVSMLEEELESSKDQGERWRAEL
QAVTEEKRIPRGRHPLKKSHLEQKKVEEELKDLQESQPSTDESRALKDELRRCHDDLKQT
RAHLDRQKAELEQRHEALDGLKKASGEKEAELQAEIRRLKEQSEKDKEELQRVKEASLDH
SAALELQETNLRLKERLARMSKLPRSSEPSEELEALEDENRALKSQLEDAKRGASRLTKE
RDELGRRLEERELEREALRKGKVDLEEQKRQLDRALEKITKEMEMMMSDSRQSVSALQTQ
LDDFRERSRKELLEAQRSGKDRQAELQRVQAGLKGQQEEVSRLKKELLTCSEDRDSAQLE
RDLLSNRLKHLESELESERSSQSDRTREIRGLEDKIKTLEIELDEERTSVELLNDRISRS
REQVDQLRSELMQERSARHDLEMDKSVLERQVKELKSRVADMEGQTRPSAGVSLLESKLQ
EMEDRLRSEEREKATIQASLRRTERKLKEVTTTLDQERSQHTEQRDQLSLRVKGLKRQVD
ESESEVERLEGVRRKILRELEEQQELQEALQAKVTSLENEQKRKSQHSYRPALTSTFSSE
EEDAPYDASISSILAESSSC
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgagcacgctgtcccccgacaggaagccgcatgtggactatggcgtccagatccgcttc
atcaaagacctccacgacacaggtgggggcttccctgacaaatctaaggggagcggcggt
gcgaccccgccctccaacaagtacggcgtggccgtgcgggttcagggcatctcgggtcag
ccctacgtggtccttaaagatggagataaaggagactcgtatggcgtgcagctaaccacc
cccacccccgaggggtaccacacccttcccaaacgaaaggacccggcagaagcccccaaa
cggttcggcccggcggagaacgcgccgcgctccccggctccacccaccgaggaggaagac
ggggagatgttcgggagtcctctgaggcgacctccgggggatgggcaagcaggaacacaa
ggggaggaggaacgaggaggtgggaggagcagagacggggagcgccccaaatctgagcag
cccaaaccagcgttcaacagaaccgagcaaagaccggaccggaccgctccagaggaatac
aacgaagcaggactgaaaccggtccgctccagcactctcgggcccagaaagttcaccccc
agtgcccccagcctcaccagctctttggggcggtaccgggacaacaagctgcctcccccc
tccccggagctcctcccagaacctcctggagaacctgccgccatcgacaccaagtctctg
gctcccatcaacaaactcatcagcaagttcaacagcgggacgccggggggcgacgccacg
ccgacccgcggccgcaccggagcccggcagaggctggacttcgaccagcgcacccggtcc
agaagcctcgatgcaagaaagaactctgaaccggaagttctgctgcctccatcttcctct
gtggacccggacgaagaggctccgcccccatccttcactcctctgaggtcatcagctccg
gctaaaggaagctcaggaattggaccgtcagccacgaccaaggtgacggcgcctgtgggc
ctgagggcggggctcagtccgccagagaagtccaccgtcaaggagacggtttctgccaca
aaacctgtcattccttcaaagagtttcctccagaacgcagacgctgcagacgcaggcgca
gacgcagacaaggatccgctcaaacgggccgtctacggcatccggaaggacggcgacagc
gatgtatccctgaagagaaaggtggacgtcgtgtgtgatcccgccgacagtctgaagagc
ggatcggacggattcatcccagcgccgactctggaggagcagctgaagttctgcaagaag
gagctgcagcagacgcagaatgaactgtctgcagagcatcaggccagagaggcagccgag
tcgcggctgctcctgcaggaggaccagctggctcagcttcaggaggagctgaggagactc
tctgagatctcccctcagacgggctccatgcagacggacgtggtggtcctgcaggcgaag
ctcgccgaggtcaccgtgctgcagcagcgccaggaggaggtgctgcgccagcgggagcgg
gagctgacggccctgaagggagcgctgaaggaggaggtggagtgccacgacaaggagatg
gagagtctgagggagcagtacagccaggacatggaggcgctgaggagaaccatggagcag
ttctcacagtcccaggagcagatcgaggaggagcgcgagagggtgaacgcctcggtgtcc
atgctggaggaagagctggagagcagcaaagaccagggcgagcgctggagggcggagcta
caggccgtcacagaggagaagaggattcctcgcgggcgccatccactcaaaaagtctcat
ttggagcagaagaaagtggaggaagaactgaaagatctgcaggaatctcagccttcaaca
gatgagagccgggcgctgaaagacgagctccggcgttgccatgacgacctgaagcaaact
cgcgcccatctggaccgacaaaaggccgagctggagcagagacacgaggcactcgacggt
ctgaagaaggcgagcggagagaaggaggcggagctgcaggccgagatccgccgtctgaag
gagcagtcggagaaggacaaggaggagcttcagagggtgaaggaggcgtctctggaccac
agcgccgccctggagctccaggagaccaacctccggctcaaagagcggctggcccgcatg
tccaaactccctcggagctcggagcccagcgaggagctggaggccctggaggacgagaac
cgcgcgctcaagtctcagctggaggacgccaagcgaggcgccagccggctgaccaaggag
cgggacgagctgggccgccggctggaggagcgggagctggagcgggaggcgctgaggaag
gggaaggtggacctggaggagcagaagaggcagctggaccgagccctggagaagatcacc
aaggagatggagatgatgatgtcggactcccggcagtcggtcagcgccctgcagacgcag
ctggacgacttccgggaacgctccaggaaggagctcctggaagctcagcggagcgggaag
gaccggcaggcggagctgcagagggtccaggccggcctgaagggccagcaggaggaggtt
tctcgtctgaagaaggagctgctgacctgcagcgaggaccgagacagcgcccagctggag
agagatctgctcagcaaccggctgaagcatctggagagcgagctggagtccgagaggagc
tcccagtccgaccgaacccgggagatccgaggtctggaggataagatcaaaactctggag
atcgagctggacgaggagcggaccagcgtggagctcctgaacgaccggatcagccgcagc
cgagagcaggtcgaccagctccgctcggaactcatgcaggagcgatccgccaggcatgac
ctggaaatggacaagagcgtcctggagcggcaggtgaaggagctgaagtcccgcgtggcg
gacatggaggggcagacacgcccctcggctggagtctcgctgctggagtccaaactgcag
gagatggaggaccgcctgcgcagcgaggaaagagaaaaggcgacgatccaggcgtctctg
agacggactgagagaaaactgaaggaggtgacgaccacgctggaccaggagaggagccag
cacacggagcagcgggatcagctgtccctgcgtgttaagggtctgaagcggcaggtggat
gagagcgagagcgaggtggagcgcctggagggagtccgccgtaaaatcctgagggagctg
gaggagcagcaggagctgcaggaggcgctgcaggccaaagtcacgtcgctggagaacgag
cagaagaggaagtcgcagcactcgtaccggcccgccctgacctccaccttcagctcggag
gaggaggacgctccctacgacgcctccatctcctccatcctcgccgagagcagcagctgc
tag

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