Oryzias melastigma (Indian medaka): 112162668
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Entry
112162668 CDS
T07439
Name
(RefSeq) uncharacterized protein LOC112162668 isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112162668
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112162668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_1
C6_DPF
zf-C2H2_6
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF462
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
112162668
NCBI-ProteinID:
XP_024154294
Ensembl:
ENSOMEG00000010224
LinkDB
All DBs
Position
LG11:23705479..23734647
Genome browser
AA seq
1285 aa
AA seq
DB search
MKSLYEVKMMDCDDQKFDGLRDSPETNVKKEKPKLLEVVKTFVNLMEIKKESDTSAVEII
AVPIPLSNCKPVKHNTEKQEFSQSSGSSLGFTVNGRAVSMPSGGAELKLCSHPGGSASGF
TSIQMPVTLTVHSPAGTHVFNTTASLTSSAPSSSNSAPAEPSPKPDAIPIITGVVSGEAA
QKVLNDHNVNFTSSVSSPPQSVPPTFEKKKGLSSKPAANKQLRKGEVGPVAPPKCNTCGT
QYKLVTELRGFMCLCSPSIALSLKNMRRSINQKRRNKNKNRTPKNNRDPQSSNKSFSIWS
EPPAVKDTTPPQKPHKTSDDYIYEDFPSPSSPLAASSSQLENLSQTTTEIPKAKMVILLE
DFYYGKDPGRSASQANLTSGRSCGPFTCIVCSESLLNNIKLMQHMKQHMFLMSKENEEDE
PLPSCSLCYRNFPSPFKLQCHIEAAHSHLKTTALCKICELEFESEPAFMWHMKTTHKPGE
MPYICQVCDFRSSFYSDVWSHFQDTHANTKHLLCQFCLRVLRSNICFQQHFARHQRKHKL
SCDKCRLHFLYVKERVEHGALCHKTHIKPRQLCGLKPGTKVTVRTYAMVGGPRNQSGLKK
IVPCKVVNVSPLHPIQEAPKRKTVESLGPLLSGLNTDRASPPSLSCIECLASVPDFQLHF
PSVVHCSLCRFVTCCSASYANHMINNHTTSRRAPKFPAIFQPEPRLSEELKCGSCSFSTF
KGDVIANHLSENPSHGFAKIGNEVSDRTEEEPEKINFDSTPFSTILSPTGEGTFVPIQLA
PSIEASTQLTIKLLNTKSKPTFTPAMTVKIMASQPELEKEKSDAEQKPPKQGNKETEEQP
LIPTLTIHKLSVILSSMCHGVAQASRRFQTPATTIRSWIAYQQRGLNQRKWRWKTDKMAE
WVLNRREQQLTVGEDVLLLTARATLGGSCKLEEYYNWTVDVMLRHDLGLQTTNNHKLHNI
ELSSHIFLKSLFSQIQNRGVPPHCLGCMDELPVFINMDQFSNQNPLAFQLFNSHQEKPTI
DILLSALSDGSFLPPLLFFTGTALQVPEGFPDNVLLESRQQEFTENERLELWIQKVWCPN
VAFKYDQMSILMMDVHRGHLTSSFRGSLSSCKTQAAFIPAGCSCRLQPLDVCVTQVLRDQ
LLSRWNQLVSEGGLDGLGLDQLVLTLACWLSEVSFTLTSRKHFLFRSFNLTCSLDNSETP
GEAARMITALTNSLNLPTESVKAEPRAKRRKVMDEEKKPREEEAPERNEEEEEQEEEFLI
QSPSHLKQVFEGDSDEESFLGFPDC
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcctgtatgaggtgaagatgatggactgtgatgatcagaagtttgatggtttg
cgtgactcaccagagacgaatgtaaagaaggagaagccaaaactgcttgaagttgtcaaa
acttttgtcaatctgatggagatcaaaaaggaaagcgacacttcagcagtcgagatcatt
gctgttccaattcctctttctaactgtaaacccgtcaaacacaacacagaaaagcaggaa
ttctctcagtcttcaggttcatctctgggtttcactgtcaatggcagagccgtcagcatg
ccctctggaggtgcagagctgaagctgtgctctcatcctggaggatcagccagtggattc
acctccatccagatgccggtcactctgaccgtccacagccctgcagggacgcacgtcttc
aacaccaccgcctccttaacttcttctgccccctcctcgagtaattcggctcctgctgag
ccctcgcctaagcccgacgccattcctatcatcacaggtgtggtgtcaggtgaagcagct
cagaaggttctaaatgaccacaatgtgaacttcaccagtagtgtttccagccctcctcag
agcgtacccccaacgttcgagaagaaaaaagggctcagcagcaaaccggcggccaacaaa
caactacgaaaaggtgaggttggacctgtcgcccctcccaagtgtaatacctgcgggact
cagtacaaactcgtaacagaattgagaggattcatgtgtttgtgcagtccttccatcgct
ctgagcctgaagaacatgaggcgcagcatcaatcagaaaaggaggaacaaaaacaagaac
cggactccgaaaaacaacagagaccctcagagctccaacaagagcttctcgatttggtcg
gaacctccagccgttaaagataccaccccacctcagaagcctcacaaaacttctgatgat
tatatctatgaggacttccccagcccttcctctcctttggcggcgtcctcctcgcagcta
gagaatctctcccagaccaccacagagatccccaaggccaaaatggtgatcctgttggaa
gatttttattatggaaaggatcctggacgaagtgcaagccaagctaacctcacaagtgga
aggtcatgtggacctttcacctgcatcgtctgctccgagtccctcctgaacaacatcaag
ttgatgcagcacatgaagcagcacatgttcttgatgtctaaggagaacgaggaggatgaa
ccgttgccctcctgctctctctgttatcgaaacttcccgtctccgtttaagctgcagtgc
cacatagaagcggctcacagccacttgaagaccacagcgttgtgtaaaatatgtgagctg
gagtttgagagtgaaccggccttcatgtggcacatgaaaaccacacacaaacccggagag
atgccgtacatctgccaggtgtgtgacttcaggtcgtccttctactccgacgtctggtct
cacttccaggacacgcacgctaacaccaagcatctgctgtgccagttctgcctgagagtt
ctgcgcagcaacatctgcttccagcagcactttgctcgccaccagaggaaacacaagctg
agctgcgacaagtgtcgtctccacttcctctacgtcaaagaacgtgtcgaacacggcgcg
ctgtgtcacaaaacacacatcaaaccccgtcagctctgcgggctcaagcctggaactaag
gtgactgtacggacgtacgctatggttggtggaccaagaaatcaaagcggtttaaaaaag
atcgtcccatgcaaggttgtaaatgtttccccgctgcatcccattcaggaagcccccaag
aggaaaacggtagaaagtttgggacctctgctgtcaggactgaacacagacagggcgtct
cctccgtctctgtcctgcatcgagtgtctcgcctccgttccagatttccagcttcacttt
ccatccgtggtccactgctccctctgcagattcgtcacctgttgctccgcctcctacgcc
aaccacatgatcaacaatcacaccaccagcaggagagccccaaagttcccagccatcttc
cagccagaaccgaggttgtcggaggaattaaaatgcggctcgtgctcgttctccaccttc
aaaggggacgtcatagcaaaccacctgagtgagaatccgtctcacggatttgcaaaaatc
ggaaacgaagtttcagatcggactgaagaagaacctgaaaagatcaattttgacagtact
cccttcagcaccatactgtctcccaccggagagggaacgtttgtcccgatccagctcgcc
ccctccattgaagcctccacccagctgaccatcaagctcctcaacaccaagtccaaaccc
actttcactccagccatgaccgtcaagatcatggcgtctcagccggagctggaaaaggaa
aagagtgatgcggagcagaaaccccccaaacagggtaacaaagagacggaggaacagccg
ttgatcccgacactgaccatccacaagctctccgtcatcctgtcttcaatgtgtcacggc
gtcgctcaggcctcccgccgcttccagacgcccgccaccacgatccgctcctggatcgct
taccagcagcgcgggctgaaccagagaaagtggcgctggaaaacggacaagatggcggag
tgggtgctgaaccggagggagcagcagctgacggtgggcgaggacgtcctgctgctgacc
gccagagccacgctgggagggagctgcaagctggaggagtattacaactggacggtggac
gtcatgctgaggcacgacctcggccttcagaccaccaacaaccacaagctgcacaacatc
gagctcagcagccacatcttcctgaagagcctgttctcacagatccagaatcgcggcgtt
cctcctcactgcttgggctgcatggacgagctcccagtcttcatcaacatggaccaattc
tccaaccaaaaccctttggccttccagctgttcaactctcatcaggagaagcccaccatc
gacatcctgctctccgctctatccgacggcagctttttgccccccctgctgttcttcacg
ggaactgcactgcaggttcctgaggggtttccggacaacgttctgctggagtctcgacag
caagaattcactgagaacgagcgcttggagctctggatccagaaggtgtggtgtcccaac
gtggcgttcaaatacgaccagatgtccatcctgatgatggacgtccaccgcggtcacctg
accagctcgttccggggaagtctgtcctcctgcaaaacccaggcggccttcatccctgca
ggatgcagctgccgcctgcagccgctcgacgtctgcgtgactcaagtcctgcgagatcaa
ctgctgtcccgatggaaccagctcgtctcagaaggaggtctggacggtctgggactggac
cagctggttctgacgctggcctgttggctcagtgaggtgtccttcacgctgacctcaagg
aaacactttctgttcagatccttcaacttgacctgcagtctggacaactctgagactccg
ggggaggcggcccggatgatcaccgctctgaccaattctctgaacctgcctaccgagagc
gtaaaggcggaaccgagagcgaaacgtcggaaggtgatggacgaggagaagaagccacga
gaagaagaggctcctgaaagaaacgaggaggaagaggagcaggaggaggagtttctcatc
caaagcccctcccatctgaagcaggtgtttgaaggtgacagtgatgaggagtcgtttctt
ggtttcccagactgctga
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