KEGG   Oryzias melastigma (Indian medaka): 112162724
Entry
112162724         CDS       T07439                                 
Symbol
lin54
Name
(RefSeq) protein lin-54 homolog
  KO
K21776  protein lin-54
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    112162724 (lin54)
SSDB
Motif
Pfam: TCR
Other DBs
NCBI-GeneID: 112162724
NCBI-ProteinID: XP_024154363
Ensembl: ENSOMEG00000018289
UniProt: A0A3B3CFM5
LinkDB
Position
LG12:complement(2636481..2651656)
AA seq 795 aa
MDVVSPELNSLLPDEIMDTEAIEEAPQSESAAVQAEPCYDSTVPMETDVPPNPSASEDVT
STGNSQTLLTPADSTLSPSRHSSILISSGPSRLVTLKPGLATSTAPTKTTDSVTGTSMST
GGLQKLTAPFTISSANHQIILNKVASSQAAEAAKSVAPPPQVIKQEGQKLLVTTIGKSGQ
PIVLQLPHAGSKPTVVQTSGDGKAQTPQFKVVTIGGASELKPVVGSGGNQVTAVQTQQLK
TIQIPKKTPVSSTAPIKFIITKTVNSKNLSPQTSVTPVIAAGRVVTQTSPVMPPRTITLS
EPHNTNLQNISSKKIAISPLKTPSKVTVVSVASPPSNSSQKSVALPVNVALGQQILAVQQ
SSVSPVKAATSQPAAPSVKPVQSVAVGGVGGSQFKTIIPLATQQNVQQIQVPGSRFHYVR
LVTATTSSSPGQPSTSSVQTGKPMVGGTGAVRMSVPVVQAPTMKQVVPKPLTSAAQVVAA
PQTQQRLIMPAIQPNLTNLPLGTVLAPAPGGGNMGYAVLPAQYVTQLQQSPFVTLASSSG
FQASSGMQTQAKLPLNGVSAAETTTRPRKPCNCTKSQCLKLYCDCFANGEFCNMCNCNNC
FNNLEHETERLKAIKTCLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY
EAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQISDLLMRTT
PVISTGSGRLPYTFLTKEVVEATCECLLEKARKAEQTHQLTSEAERVILEEFGHCLMNII
TSAGKAKADSASINC
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggacgtggtgtcgcccgagctgaacagcctccttcctgatgaaatcatggacacggag
gccattgaagaggctcctcagtccgagagcgccgcagtccaggcggagccctgctacgac
tccaccgttcccatggaaacggacgttcccccaaatcccagcgcctctgaagatgtaact
tcgacggggaactcccaaaccctgctcacacccgcggactccacgctcagccccagcaga
cattcctccatcctcatttccagcggcccgtcgcgcctggttaccctcaaaccgggcttg
gccacctcgacggcccccaccaaaaccacggacagcgtgacggggacgagcatgtccacg
gggggcttgcagaaactcaccgcccccttcaccatttcctcggccaatcatcaaatcatc
ctcaacaaggtcgcctcgtcgcaagccgccgaagccgccaagtctgtggcgcccccgccg
caggtcatcaagcaggaagggcagaagctgctggtcacgaccatcggcaagtcggggcag
ccgatcgtgctgcagctgccgcacgccggcagcaaacccaccgtggtccagacctcagga
gacggcaaggctcagactccacagtttaaggtggtcactataggcggggcgtcggaactg
aagccggtggtcgggagtggagggaaccaggtgacggcggtgcagacccagcagctcaag
accatacagattcccaagaaaactccggtctcctccacggctcccatcaagttcatcatc
accaaaacggtcaacagcaaaaacctgagtcctcagacgtctgtcacacctgtgattgca
gcaggccgggtggtgacgcagacgtccccggtgatgccccccaggaccatcacgctgtcc
gagcctcacaacaccaacctgcagaacatctccagcaagaagatcgccatttctccactc
aagactcccagcaaggttaccgtggtttccgtagcctctccaccctccaactcctcgcag
aaatccgtggcgctgccggtcaacgtggcgctcggccagcagatcctcgccgtccagcag
tcctccgtttctccggtcaaagcggccaccagccagcctgcagcaccgagcgtcaaacct
gtccagtccgtggcagtgggaggagtcggaggctcccagttcaagaccatcatccctctg
gccacccagcagaacgtgcagcagatccaggttccaggaagcaggttccactacgtccgg
ctcgtcacggcgaccacatccagcagcccgggccagcccagcaccagctccgtgcagaca
gggaaacccatggtgggcggcacgggagcggtcaggatgtcggtccctgttgttcaggct
ccgaccatgaaacaggtggtgcccaaacctctgacatcagcagcacaggtggtggcggcc
cctcagacgcagcagcgcctcatcatgcccgccatccagcccaacctcaccaacctgccg
ctgggcaccgtcctggctccagcgcccgggggcgggaacatgggctacgccgtcctcccc
gctcagtatgtcacgcagctccagcagtccccgtttgtgactctcgccagcagctctggt
ttccaggcgtccagcgggatgcagactcaggccaaactgccccttaatggtgtttcagcg
gcagaaaccacaaccagaccgaggaaaccctgcaactgcacaaagtcacagtgtctcaaa
ctatactgcgactgcttcgcaaacggagagttctgcaacatgtgcaactgcaacaactgc
ttcaacaacctggagcacgagacggagcgtctcaaagccatcaagacgtgtctggaccga
aatccagaggccttcaaacccaaaatcggtaaagggaaggagggcgagtccgaccgccgc
cacagcaaaggctgcaactgcaagcggtccggctgcctgaagaactactgcgagtgctac
gaagcgaagatcatgtgctcgtccatatgcaaatgcatcggctgtaaaaacttcgaggag
agcccggagaggaagacgctgatgcacctggcggacgcagcagaagtacgggttcagcag
cagacggcggcgaagaccaaactgtcctcgcagatctcagacctgctcatgaggaccacg
ccggtgatttccaccggcagtgggaggcttccgtacacgttcctaacgaaggaggtggtg
gaggcgacgtgcgagtgtctgctggagaaggccaggaaagccgagcagacgcaccagctg
acgagcgaggcggagcgggtcatcctggaggagttcggacactgccttatgaacatcatc
acctcagcggggaaggcgaaagcggacagtgcctccatcaattgctag

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