Oryzias melastigma (Indian medaka): 112162735
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Entry
112162735 CDS
T07439
Symbol
pax8
Name
(RefSeq) paired box protein Pax-8 isoform X2
KO
K09293
paired box protein 8
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112162735 (pax8)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112162735 (pax8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
HTH_SB
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
112162735
NCBI-ProteinID:
XP_024154376
Ensembl:
ENSOMEG00000003907
LinkDB
All DBs
Position
LG12:complement(12167439..12178676)
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AA seq
461 aa
AA seq
DB search
MSNTGRGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKIL
GRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDTV
PSVSSINRIIRTKVQQPFNLPLDGKGLSPGHTLIPSSAVTPPESPQSDSVGSTYSINGLL
GIAQPNSDGKRSHDDSDQESCRHSVDSQGSGSVPRKQMRLDQFSTHLDCGFDRHHYPPES
FSSSSSNKTEQTLYPLSLVNGSLDEAKTTLSSTSVIGRNLSAHQSYTMVTEPLQTLPLCL
KQEMSPEVTSTSPSPNIAAPNLAFVDLQALQKPVSVSSSCNGSSSNSNHFSNTFNSFSHH
APAYGQFSSQSIISGRDMMSSTLPGYPPHIPSPAQSGYSSSAITGMVAAGADYSGQSYSH
SPYTSYSEAWRFTNSSILGSPYYYSSASRTGPPSAAAYDHL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacactggaagaggtcatgggggtcttaatcaactaggtggaatgtttgttaat
ggtcgcccacttccggaagtgatccggcaacgcattgtggacatggcccaccagggcgtc
cggccctgcgacatctcacggcagctccgggtcagtcacggctgcgtcagcaagatcctg
ggacgctactacgagactggcagcatcaagcccggcgtgattggaggctccaagccaaaa
gtggccacgccaaaagttgtggagaaaattgcagagtataagaggcagaatcccaccatg
ttcgcttgggaaatcagagaccggctgctggcggagggcgtatgcgacagcgacacggtg
cccagcgtaagctccattaacagaatcatccgaacaaaggtccagcagccgtttaacctc
ccgctggatgggaaaggcctgagtcctggtcataccttaatacccagctcagctgtcacc
cccccagagtctccacagtcggactcagtgggctccacctactccatcaacggcctgttg
ggtatcgctcaacccaactctgatggcaagaggagccacgacgacagtgatcaggaaagc
tgccggcacagtgtggactctcagggcagtggaagtgtacccaggaaacagatgagactg
gaccagttctcaacacatctggactgcggctttgatcgccaccactaccctccagaatcc
ttcagctcgtcctccagcaataagacagaacagactttgtacccactgtccctcgttaat
ggcagcctcgacgaggccaagacgaccctctcatccacgtccgtcattggacggaatctg
tcggcacatcagagttacaccatggtgactgagccccttcagaccctgccgctgtgtcta
aaacaggaaatgtccccagaagtgaccagcacaagcccctccccaaacattgcagcgccc
aacctggcgtttgtggacctgcaagcgctgcagaagcctgtttctgtcagtagcagctgc
aatggcagcagcagcaactccaaccatttttccaacaccttcaactcattctcccatcat
gcaccagcgtacgggcagttcagcagtcagtccataatctcaggacgggacatgatgagc
tccaccctgccaggttacccgccccacatcccctccccagcccagtcgggatactcctcc
tccgccatcacaggcatggtggcagcaggtgcagactactcgggtcagtcctacagtcac
tcgccctacacctcctacagcgaagcctggaggttcaccaactccagcattctgggatct
ccatactactacagctcggcctcccgcacaggtcctccttctgcagccgcctacgaccac
ctctag
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