Oryzias melastigma (Indian medaka): 112162766
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Entry
112162766 CDS
T07439
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112162766 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112162766 (myo5b)
04131 Membrane trafficking [BR:
oml04131
]
112162766 (myo5b)
03029 Mitochondrial biogenesis [BR:
oml03029
]
112162766 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112162766 (myo5b)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112162766 (myo5b)
mRNA cycle factors
P-body specific factors
112162766 (myo5b)
Membrane trafficking [BR:
oml04131
]
Others
Actin-binding proteins
Myosins
112162766 (myo5b)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112162766 (myo5b)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112162766 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_22
Myosin_N
AAA_16
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112162766
NCBI-ProteinID:
XP_024154418
Ensembl:
ENSOMEG00000005222
UniProt:
A0A3B3BGC9
LinkDB
All DBs
Position
LG12:complement(106953..135461)
Genome browser
AA seq
1805 aa
AA seq
DB search
MKAEYNLYCQFTRVWIPDPEEVWKGAEIIKDYKEGDPVLHLKLEDETTLEYQVGPKQNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNHIYTYCGIVLVAINPYESLQIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSTNDTSVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASGSLPEFRDLGLTSAEDFTYTSLGENIFIEGV
NDAEDFRKTREAFTLLGIKDSSQSSIFKIVASILHLGNIQICSERDGESCRISRDDAHLQ
SFCKLLGVELQQMEHWLCHRKLVTASETYVKSMAAKQAVNARDALAKHIYARLFDWIVEH
INKALQTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFHDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSSSAHFQ
KPRMSNVSFIVIHFADKVEYQCDGFLEKNRDTVYEEQINILKASQFQMVADLFLDKDDAP
PSSKPSRVNVRALKPSPKAPNKEHRKSVGLQFRSSLHLLMDTLNATTPHYVRCIKPNDFK
EAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYLEFFSRYRVLMKRSDMTAADKKLV
CKNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRADKFRSACIVIQKTVRGWLQRIRY
RKIRRSALTLQRYGRGYLARRYAEFLRLSRAALFCQKQYRMVRERRAYLRKRRAVVTIQA
FTRGTLTRRIYWEFLLHHKAMIIQKNVRGWLQRRTFRRARAAAVVIQGAFRCMRAKRQLK
QLKIEARSAQHLKKLNTGMEMKIVQLQRKMDDQTKELKVQNEQLVTVNTTLGSEVSKLQK
ELEEVRSHQSDGGRELQEELERLRQQLQEAIASRKKLEEEHVSEKMELSQRVEELQEENA
LLKSQKEELNQQIQQQTSNSKVELSSASLQSELDEERQRYQNLLKEFSRLEQRYDNLKEE
LSLNKFHPGHRRNPSNQSSLESDSNYPSVSTSEVGDTEDAVQLVDELGVEKAAMDIGLFL
KLQKRVRELEQERKRLQVNLDKMEELARRKGSEPRSPVSEQETADLAYDNLKRQELESEN
KKLKNDLNELRKALSERAAPDGPSGELQDGYNLLLRQLKSANEELDARKEEVLILRTQIV
SRAQQEENSQNTEPDGGPDRSRDHDYHGLTQSNKLLEAQLQSQSRKYQDELEALHTQNEL
LKEDLEKKQELLNYTAALSPEARVEYSVQQEITRLTNDNLDLKEMVEKLEKNERKLKKQL
RIYMKKVQELEAAAAAAAAQSVSARPELSRQVTVQRKEKDFEGMLEYSKEDEARLIKALI
TDVRPSSVSATVPCLPAYILFMCIRHADHVNDDQKVESLLTSTINAIKKVLKKNSEDFEM
ISFWLANTSRLLHCLKQYSGDEAFMTQNSDKQNEHCLKNFDLAEYRQVLSDLSIQIYQQL
IKVAEAIIQPMIVSAMLESESIPSLAGVKPMGYRNRSHSMDTEDGPTSYTLEALIRQLGQ
FHAVMQEHGLDPEIIGQVVRQLFSCVNAVTLNNLLLRKDVCSWSTGMQLRYNTSQMEEWL
RANNLFQSKAAATLEPIIQAAQLLQVKKKTTQDAEAICSLCTALTMQQIVKILNLYTPLN
EFEERVTVSFIRNIQNRLQERNDPPQLLVDTKFTYPVLFPYAPSALSLDALHIPASLGID
FLVRV
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggaatacaacctttactgccagttcacacgggtctggatcccggacccggag
gaggtctggaagggagcagagatcatcaaagactacaaagaaggagatcctgttctccat
ctgaagttggaggatgagacgactttggagtaccaggtgggtccgaagcagaacccgctc
ccgttcctacgaaacccggacatcctggtgggcgagaacgacctgacggctctcagctac
ctccatgagccggccgtcctgcacaacctgagggttcgattcctggagtccaaccacatc
tacacatactgtggcatcgttcttgtggccatcaacccgtacgagtccctgcagatctat
ggagaagaggtgatcaacgcctacagtgggcagaacatgggcgacatggacccacacatc
tttgctgtggctgaggaggcatacaaacaaatggccagagacgagcgaaaccaatcgatc
atcgtgagcggggaatctggagcaggtaagacggtttctgccaagtatgccatgaggttc
tttgccactgtgggcggctccaccaacgacaccagcgtggaggagaaggttctggcctct
agccccattatggaggccattggaaacgccaaaaccacacggaacgacaacagcagtcgc
tttgggaagtacatccagatcggcttcagcagacactaccacatcatcggtgctaacatg
aggacttacctgctggagaagtctcgcgttgtcttccaggctgaagatgagaggaactac
cacatcttctaccagctgtgtgcctcggggagtcttccagagttcagggacctcggcctt
accagtgcagaggacttcacgtacacctctctaggagagaacatcttcatcgaaggcgtg
aatgatgctgaagacttccgaaagaccagagaggccttcacactactagggatcaaggac
agcagtcagagcagcatcttcaagatcgtggcctccatccttcatcttgggaacatccag
atttgctcggagcgggacggagaatcctgccgcatctcgagagacgacgcccacctccag
agcttttgtaaactcctgggggtggagcttcagcagatggagcactggctctgccacagg
aaactggtgacggcatccgagacctacgtgaagagcatggcggccaagcaggcggtgaat
gcgcgcgacgcgctcgccaagcacatctacgctcggctgttcgactggatcgtggagcac
atcaacaaggcgttgcagacttctagcaagcagcactccttcatcggagtcctggacatc
tacgggttcgagaccttcgaggtgaacagctttgagcagttctgcatcaactacgctaac
gagaagctgcagcagcagttcaactctcatgtcttcaaactggagcaggaggagtacatg
aaggagcagatcccgtggactctgatcgacttccacgacaaccagccctgcatcgacctg
attgaggctcgcctcggaatcctagacctgctggacgaggagtgtaaggttccgaaggga
acggaccagaactgggcccagaagctctacaagcagcactccagcagcgcacacttccag
aaacctcgaatgtccaacgtctccttcatcgtcatccattttgctgacaaggtggagtac
cagtgtgacggcttcctggagaagaatcgagacacggtgtatgaagagcagatcaacatt
ctgaaagccagccagtttcagatggtggctgacctgtttctggacaaggatgacgccccc
ccctcgtccaagccctccagagtcaacgtcagagctctgaagcccagtcccaaagccccc
aacaaggagcacaggaagtctgtggggctccagttccgctcctctctgcaccttctcatg
gacacgctgaacgccaccacgccgcactacgtccgctgcatcaaacccaatgacttcaag
gaggccttctcgttcgattcccggcgagctgtgcagcagctccgggcctgtggagttctg
gagaccatccggatcagtgccgctgggtatccgtcaaggtggacgtacctggagttcttc
agccggtaccgggttctgatgaagcggtccgacatgaccgctgcagataagaagctggtg
tgtaaaaacctactggagacgctgatcaaggaacccgacatgttccagtttgggaagacg
aagatcttcttccgggccggtcaggtggcatacctggagaagctgcgggccgataagttc
cgctcagcctgcatcgtgatccagaagacggttcggggctggctgcagaggatccggtac
cgcaagatccgcagatctgccttgaccctgcaaagatacgggcggggctacctggcccgc
aggtacgcagagttcttacgccttagccgggccgccctgttctgccagaaacagtaccgc
atggtgagagagaggcgggcctacctgaggaagaggcgggccgtggtcaccatccaggcg
ttcacccgaggaacgctgacccgcaggatctactgggagttcctgctgcaccacaaggcc
atgatcatccagaagaacgtgcgcggctggctgcagagaaggacgttccgacgtgcgcgc
gccgccgccgtggtcattcagggtgcgttcaggtgcatgcgggccaaacggcaactgaag
cagctgaagatcgaagctcgttccgctcaacacctgaagaagctgaacacgggcatggag
atgaagatcgtgcagctgcagaggaagatggacgatcagaccaaagagctgaaggtccag
aacgagcagctggtgacggtgaacaccactctgggctccgaggtctccaagctgcagaag
gagctggaggaggtgcgcagccaccagagcgacggaggccgggagctgcaggaggagctg
gagcggctgcggcagcagctgcaggaggccatcgccagcaggaagaagctggaggaggag
cacgtcagcgagaagatggagctctcacagagggtggaggagctgcaggaggagaacgct
ctgctaaaaagccagaaggaggagctcaaccagcagatccagcagcagacctcgaacagc
aaagtggagctcagcagtgcgtctctgcagtcggagctggatgaggagcggcagcggtac
cagaacctcctgaaggagttctccaggctggagcagcgctacgacaacctgaaggaggag
ctgagcctgaacaagttccatcccggacaccgcaggaacccgtccaatcagagcagcctg
gagtccgactccaactacccgtccgtctccacctcagaggtgggagacacggaggacgcc
gtccagctggtggatgagctgggggtggagaaggccgccatggacatcggcctgttcctg
aaactgcagaagagggtccgggagctggagcaggagaggaagcggctgcaggtcaacctg
gacaagatggaggagctcgccaggcgcaagggctcggaaccaagaagtccagtttctgag
caggagaccgcagatctggcctacgacaacctgaagagacaggagctggaatcagagaac
aagaagctgaagaacgacctgaacgagctgaggaaggcgctgagcgagcgcgcggcgccg
gacggcccgtctggcgagctgcaggatggctataacctgctgctccgccagctgaagtct
gccaacgaggagctggacgcccgcaaggaagaggtgctcatcctgaggacccaaatcgtg
agcagggcccagcaggaggagaacagccagaacacggaacctgatgggggtccagaccgc
agcagagaccacgactaccacggactgacccaatccaacaagctgctggaggcacagctg
cagtctcagtccaggaagtatcaggatgagctggaggctcttcacacccagaacgagctg
ctgaaggaggacctggagaagaagcaggagctgctcaactacaccgccgcgctgtccccg
gaggcgcgggtggagtacagcgtccagcaggagatcaccaggctcaccaacgacaacctg
gatctgaaggagatggtggagaagctggagaagaacgagaggaagctgaagaagcagctg
aggatttacatgaagaaggtccaggaactggaagccgccgccgccgccgccgccgctcag
agcgtctccgccagacccgagctgagccggcaggtgacggtccagaggaaggagaaggac
tttgagggaatgctggagtacagcaaggaggatgaagcacgcctcatcaaggctctgatc
acagacgtgcggcccagctcggtgtccgccaccgtcccctgtctgcccgcctacatcctc
ttcatgtgcatccgccacgccgaccacgtcaacgacgaccagaaggtggagtctcttctc
acctccaccatcaacgccatcaagaaggtcctgaagaagaacagcgaggacttcgagatg
atctccttctggctggccaacaccagccggctgctgcactgcctgaagcagtacagcgga
gacgaggccttcatgacccagaactcggacaagcagaacgagcactgcctgaagaacttc
gacctggccgagtaccggcaggtgctgagcgacctgtccatccagatctaccagcagctc
atcaaggtggccgaggccatcatccagcccatgatcgtgtcggccatgttggagagcgag
agcatccccagcctggcgggcgtgaagccgatgggataccggaaccgctcgcacagcatg
gacaccgaggacggccccaccagctacaccttggaggcgctgatccggcagctggggcag
ttccacgccgtcatgcaggagcacgggctggaccccgagatcatcggccaggtggtgcgg
cagctgttcagctgcgtcaacgccgtcacgctcaacaacctgctgctgcgcaaggacgtc
tgctcctggagcaccggcatgcagctcaggtacaacaccagccagatggaggagtggctt
agagccaacaacctgttccagagcaaagccgccgccacgctggagcccatcatccaggcg
gcgcagctgctgcaggtcaagaagaagaccacccaggacgccgaggccatctgctcgctc
tgcacggcgctcaccatgcagcagatcgtgaagatcctgaacctgtacacgcctctgaac
gagttcgaggagcgggtgaccgtctccttcatcagaaacatccagaaccgtctccaggag
aggaacgacccaccccagctcctggtggacaccaagttcacctacccggttctgttcccg
tacgcgccgtccgctctgagtctggacgcgctgcacatccccgcctcgctcggcatcgac
ttcctggtcagggtgtga
DBGET
integrated database retrieval system
