Oryzias melastigma (Indian medaka): 112162778
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Entry
112162778 CDS
T07439
Symbol
ank1b
Name
(RefSeq) ankyrin-1 isoform X1
KO
K10380
ankyrin-1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112162778 (ank1b)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
112162778 (ank1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
UPA_2
ZU5
ANK_LRRK2
Death
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
112162778
NCBI-ProteinID:
XP_024154431
LinkDB
All DBs
Position
LG12:16948838..17036153
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AA seq
1901 aa
AA seq
DB search
MAQAAKQLRKTKDLAEAAAQEQREKEEEKLKKRNRSRDRRRKADAATSFLRAARSGNLDK
ALDHIKNGIDINIANQNGLNGLHLASKEGHVKMVLELLHSGIELEATTKKGNTALHIAAL
AGQEKVVAELVNYGANVNAQSHKGFSPLYMAAQENHLEVVKFLLENGANQSLPTEDGFTP
LAVALQQGHENVVALLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGF
TPLHIAAHYENMSVAQLLLNRGANVNFTPKNGITPLHIASRRGNVMMVRLLLDRGAQIDA
KTKDELTPLHCAARNGHVRIIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVRQLLQY
NAEIDDITLDHLTPLHVAAHCGHHRMAKVLLDKGAKANARALNGFTPLHIACKKNHMRSM
DLLLKHSASLEAVTESGLTPLHVAAFMGHLNIVKNLLQRGASPNASNVKVETPLHMASRA
GHCEVAQFLLQNAAQVDAKAKDDQTPLHCAARMGHKELVKLLLEHKANPDSATTAGHTPL
HIAAREGHIHTIRILLDAGAQQVKMTKKGFTPLHVASKYGKVDVAELLLERGANPNAAGK
NGLTPLHVAVHHNNLDVVKLLVSKGGSAHSTARNGYTPLHIAAKQNQIEVASCLLQNGAS
PNSESLQGITPLHLASQEGRPDMVAMLISKQANVNLGNKNGLTPLHLVAQEGHVGIADTL
VKQGASVYAASRMGYTPLHVACHYGNIKMVKFLLQQQAHVNAKTRMGYTPLHQAAQQGHT
DIVTLLLKHGALPNEITSNGTSPLGIAKRLGYISVIDVLKLVTEESVSTITTEKHRMSFP
ETVDEILDVSEDEGVAQLTLGDELLGLDGARYLKLDDFKDQDDDFLSPKKTLRDFEGGVG
TTPYSPAIPRIPCVSPETVQLDQHTPIPLPKEYDEDSLIPSSPATETSDNVSPVASPIHT
GFLVSFMVDARGGSMRGSRHHGLRVIIPPRTCAAPTRITCRLVKPQKLTTPPPLVEGEGL
ASRIISLGPSSMQFLGPVIVEIPHFASLGRGDRELVVLRSENGSVWKEHRNRYGDEVLET
ILNGMDEDLESQEELEKKRIRRIISTDFPLYFAVVSRIQQESDLIGPEGGRLTTKLVPHV
EAIFPETAVTKRVRLGLQAQPIPDELLTRQLGNQATFSPVVTIEPRRRKFHRPIGLRIPL
PPSWRESPRDAGEGDTTSLRLLCSVIGGTAPAQWEDITGTTKLMYAHNCASFTTNVSARF
WLADCPRTAEAVTFANLLYKELMAVPYMAKFVIFAKMNEAREGRLRCYCMTDDKMDKTLE
LHENFSEVARSRDIELMEGMPLHLECSGNLVPIRKATQQPRSFSFQAFRDNRLPVSVKVR
DSNKEATGFLSFLRKCTKYEDAQHVLCNLNITMPPCVKVAGSEERRRTLTPLALRERYSA
LNDPAAVTVNAMERTEIKINIISEQLGLSWAELARELQFGVDDINRIRVENPNSLLDQSS
TLLNLWASREGKKAKMESLYTALKNIDRADIVASLEGQPPPAGPESLEEGACRLSDRDST
LLSPSVINEITDTRPSRLVHKPRVIRAPFFRRGYGLVQEELLSPASMQYSLQSPLGVEPY
WQEVSSLECAPIATTEEDTLMEMSDVQVWPAGVSPSLVTVEDSSLEGSSRADDSEGATLS
LPCSLGRPSSGASGASGSIMELEEEEEEEEDEGEVEEEEVPHEPASALAERDRARASGAV
PKVNQNGQLGGQRSDARRGEAAGAGRKGAQGAGLGSVDRVSLVSGQQVYTHGSEMSGLSE
HNGDNRLVGGGAFQPYLPDTDSLQGWMGSAVSAERDSSIPGLHAAPEALLTPRELKEDFS
AEVQIVEERGNALSKKVRQVGVDVRKGVQSVQRSSLRRVKH
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagccgccaagcagctccgcaagaccaaggacctcgcggaggccgccgcccag
gagcagagggagaaggaggaggagaagctaaaaaagaggaatcgatccagggaccgcagg
cgcaaggccgatgcagccaccagctttctgcgagcagctcgttcagggaacctggacaag
gccctggaccacatcaagaatggtatcgacatcaacatagcaaatcaaaacggtctaaac
gggttacatctggcctctaaagaaggtcatgtcaaaatggtcctggagcttctacactcc
ggcatcgagctggaggcaaccaccaagaaagggaacacggcccttcatatcgcagctctg
gctggacaggagaaagtggtggctgagcttgtcaactacggtgccaatgtcaatgcccag
tcccataaaggttttagtccgctctacatggctgcacaagagaaccatttggaggtggtc
aagttcctgctcgagaatggcgccaatcagagtctcccaactgaggatggcttcacgccc
ctcgccgtggctctccagcagggccatgaaaatgtggtggcgctgctcatcaactacggc
accaagggcaaagtccgcctccccgctctacacatcgctgcacggaacgacgacacccgc
acagccgccgttctcctgcagaacgaccccaaccccgacgtcctcagcaagactggtttc
actcctcttcacatagcagcacactatgagaacatgagtgtggctcagctgctgctcaac
agaggagccaacgtgaacttcacccctaagaacggcatcacacccctacatatagcttcc
agaagaggaaacgttatgatggtcagactactactggacagaggagcacagattgatgca
aaaacaaaggacgagctgactcccctccactgtgcagccaggaatggtcatgttcgcatc
attgagattctgttggaacacggtgctcctatccaggctaaaacaaagaacgggttatcc
ccaatccacatggcagctcaaggggatcacatggactgtgtcaggcagctactgcaatac
aacgctgagatcgacgatatcacgctggaccacctaaccccgcttcatgtagcagcccac
tgtggtcaccaccgcatggccaaagttctcctggacaaaggagcaaaagccaatgctcgt
gctttgaacggcttcacgcctcttcatatcgcctgcaagaagaaccacatgcggtccatg
gacctgctgctaaagcactccgcttcactagaggccgtcacagagtctggcctcactcct
cttcatgtagcagcgtttatgggccatctgaacattgtcaagaacctcctccaacgagga
gcttcacctaatgcttccaatgtgaaagtggagactcctctccatatggcctccagagca
ggacactgtgaagtcgctcagttcttgctgcaaaacgcagcacaggtggatgcaaaggca
aaggatgaccagacgcccctacactgtgcagctcgaatgggccacaaggagcttgtcaag
ctgctcctggagcacaaggccaacccagactcagccacgaccgcaggacacacgccctta
catattgctgctcgcgagggacacatccacaccattcgaattttgctggacgctggagca
cagcaagtcaagatgacaaaaaaaggctttactcctctccatgtggcctctaaatatgga
aaggtggacgtggcggagctccttctggaaagaggagccaaccccaacgcggctggaaag
aacggcctgacaccgcttcatgtggccgtccatcacaacaacctggatgttgttaaactc
ctggtcagcaaaggaggatcagcacacagcactgcccgaaacggctacacgcctctccac
atagctgccaagcagaaccagatcgaggtggccagttgtctgctccagaatggagcctct
ccaaactcagaatctctccaaggcatcacgccactgcacctggcttcacaggagggacgg
ccagacatggttgccatgctcatctccaagcaggccaacgtgaatctaggaaacaagaac
ggactgacgcctcttcatcttgtagctcaggagggtcatgtgggaatagcggacacgctg
gtcaaacaaggagcttctgtttatgctgcctcacggatgggctacacgcctcttcacgtg
gcctgtcactatggcaacatcaaaatggtgaagttccttctgcagcagcaggctcatgtg
aacgccaagacaaggatgggctacacccctctccaccaggcggctcagcagggccacacc
gacattgtcacgctgttgctgaagcatggagcactgccaaatgagattacttcaaatggg
acatcccccctgggcattgctaaacgtctcggatacatatccgtgatcgatgtcctgaag
ctggttacagaagagtccgtttccacaatcaccacagaaaagcatcgcatgagctttccg
gagacagtcgatgagatcttggatgtttctgaagatgaaggggttgcacagctaacgtta
ggtgacgagcttctaggtttggacggagcccgatacttgaaactcgatgacttcaaggac
caggacgacgacttcctctctccgaaaaagacgcttcgagattttgaggggggtgtggga
accacgccatattctcctgctattccgaggatcccctgtgtgtctccagagacggttcag
ctggaccagcacacccccattcctttgccaaaagagtatgacgaagactcgctgatcccc
agcagtccagccacagagacttcggacaacgtcagccctgtggccagccctattcacaca
ggcttcctagtgagttttatggtggacgctcggggaggctccatgcggggcagcagacac
cacggcctgcgggtcatcatccctcctcgcacctgtgcagctccgacccgcatcacctgc
cgccttgtcaagcctcagaaactcaccacacctcctccactggtggaaggggaaggtctt
gctagtcggatcatctccttgggtccatccagtatgcagttcctcggacccgtgattgtg
gaaattcctcactttgcctcacttggtcgaggagatcgagagttggtcgtacttcgcagt
gaaaacggctcagtctggaaggagcatcgtaatcgctatggcgacgaagttctggaaaca
attttaaacggcatggatgaagacttggagagccaagaggaactggagaagaagagaatc
cgccggatcatttccaccgactttcccctttacttcgccgtggtctcccgcattcagcag
gaaagtgacctcatcggtccagaaggcgggcggctgaccactaaactggtgcctcacgtg
gaggccattttccctgaaactgccgtcaccaagagagttcggctgggactgcaggctcaa
ccaatcccggatgagctgctaacgaggcagctcggcaaccaggcgactttcagtccagtg
gtgaccattgaaccacgcagacgcaaattccatcgtccgatcggactgcgtattccttta
ccaccgtcctggcgggaaagtccccgtgatgccggcgaaggagacaccaccagcttacgc
ctcctctgcagcgtcataggtggaacggctccagctcagtgggaggacatcactggaacc
accaagctgatgtatgctcacaactgtgccagttttaccaccaacgtgtctgcaagattt
tggttggcagactgtccgcgtacggcagaagcagtgacttttgccaatttgctgtacaag
gagctgatggccgttccatacatggccaagtttgttattttcgcaaagatgaacgaagcg
cgggaaggccgattgcgatgttactgcatgacggacgacaagatggacaaaactctggaa
ctgcatgaaaacttcagcgaagtggcacgcagtcgggatattgagcttatggaggggatg
ccgcttcatctggagtgttctgggaatttggtgcccatccgaaaggcaactcagcagcct
cgcagcttcagcttccaggccttcagagataacagattaccagtgtctgtcaaggtcaga
gacagcaacaaggaagccacagggtttttgtctttcctacgaaagtgcaccaagtacgag
gacgcccagcatgtgctatgtaacctcaacataaccatgccaccttgtgtcaaggttgct
ggaagtgaagagcgcaggagaactttaacccctctcgccctaagagagcgttacagtgca
ctgaacgatcctgctgcagtaacagtcaacgccatggagaggacagagatcaaaatcaac
attatatctgagcagttgggtttgagttgggcagagttggccagagagcttcagtttggt
gttgatgacataaacaggatccgtgtagagaatccaaactcccttctggaccaaagctcc
actctgctcaacctgtgggccagccgagagggcaaaaaggccaaaatggagagcctttac
actgctctgaagaacattgaccgcgcagacattgtagcttcgctggagggtcagccccca
ccggcaggacccgagtctttggaggaaggggcatgccgcctcagcgaccgtgactccacc
ttactctcccccagtgtcattaatgagatcacggacacaaggccatcgcgcctcgtgcac
aagccacgagttattagagccccgtttttcagaaggggttatgggctggtgcaggaggag
cttctttctcccgcctccatgcagtacagcttgcagtctccactgggtgtggagccctac
tggcaggaggtctctagcctggagtgtgcgcccatcgccaccacagaggaggacactttg
atggagatgtcggatgttcaggtgtggcctgcaggggtcagcccctcactggtgactgtg
gaggactcgtctctggagggcagcagtcgggcggatgactcagagggggccacgctctcc
ctaccctgcagcctcggccgcccaagcagtggcgccagcggggccagcggttccattatg
gagttggaagaagaagaggaggaggaggaggatgaaggggaggttgaggaggaggaggtg
ccacatgagccagcgagcgcactggcagaaagggacagagcgagggccagtggcgctgtg
cccaaggtcaatcaaaacgggcagctgggaggtcagaggtcggacgccaggagaggggag
gcggcgggagcaggacgaaaaggagctcagggagcagggctgggctcagtggacagggtt
tctcttgtttcaggacaacaggtgtacacccacgggagtgagatgagtggtctgtcagaa
cacaacggagacaaccggttggtggggggaggagcgttccagccctacttacccgacacg
gactccctgcagggctggatgggctcagcagtgtcagctgaacgtgacagcagcattccg
ggcttgcacgcagccccagaggcgctgctgactccgagagagctgaaggaagacttctct
gctgaggttcagattgttgaagagcgtgggaatgctctgtctaaaaaggtgcgtcaggtg
ggggtggatgtgagaaagggtgttcagtcagtgcagcgctccagtctgcggagagttaaa
cactga
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integrated database retrieval system