Oryzias melastigma (Indian medaka): 112162891
Help
Entry
112162891 CDS
T07439
Symbol
vav2
Name
(RefSeq) guanine nucleotide exchange factor VAV2
KO
K05730
guanine nucleotide exchange factor VAV
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04517
IgSF CAM signaling
oml04519
Cadherin signaling
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112162891 (vav2)
04519 Cadherin signaling
112162891 (vav2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112162891 (vav2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112162891 (vav2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
CH
SH3_1
SH2
SH3_9
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
DUF7145
C1_2
SH2_2
DH_Alsin
CDC24
Syntaphilin
PH_10
Nup88
Motif
Other DBs
NCBI-GeneID:
112162891
NCBI-ProteinID:
XP_036070300
Ensembl:
ENSOMEG00000019216
LinkDB
All DBs
Position
LG12:20412327..20645007
Genome browser
AA seq
881 aa
AA seq
DB search
MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
SQNKGIRPFPSEDTALNEDDVYRSLEELADEHDLGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEEDKRHCCLVEIQETEAKYYKTLEDIEKNYMIPLKQILSPLEMEK
IFVNLEDIIRVHFGLLRAIDLTMVSGGSGLGKIFIDFKERLLIYGQYCSHMENAQKTLDE
LTATREDIKIKVEECTLKVQEGKFKLQDLLVVPMQRVLKYHLLLKELLSHSTDRPERQQL
KEALEAMEDLAMYINEVKRDNETLKKISEFQNSIENLQQVKLEEYGRPKIDGELKVSSII
NRAKQDRYIFLFDKVVIVCKRKGYNYELKEIIELQSYKMSDDLMNNRDMKKSSGKMWSYG
FYLIHLQGKQGFQFFCKTEDNKRIWMEQFEMAMSNIKPERATANQHNFQMYTFDKNTDCR
ACKKLLRGIFYQGYYCSRCGTGAHKECLEVITICKINPHDLEPGLSPGPKMVAVRNYHGT
SPPPGKMPLCFQTGDIIELLKGDPDTTWWEGRLIQTQKSGFFPSSCVKPCLDPKPFQSIS
FRQPSRESDYYGYPWFAGNMERQQADNLLKSHSSGTYLIRERTAEAERFAISIKFNDEVK
HIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSRERSLTRAS
TRSPAATSASYNFSFLSPQGLNFSSSQSSAPFWSVFTPRVVSTAVARYNFAARDMRELSL
REGDIVKIYSKIGGDQGWWKGEANGRIGWFPSTYVDEEGVQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtggagacagtgcgggcggtggttgatagactgcaaggtgctgccccccaac
caccgggtcgtgtggccctcagcggccgtctttgacttggcacaggctctgcgagacggg
gtgctgctgtgccagatgttgcacaacctctctcccgggtcagtggacctgaaggagatc
aatttcagaccccagatgtcacagtttctgtgtctgaaaaacatccggacctttctgaag
gtgtgtcacgataagtttggcctaaggaacagtgaattattcgatccttttgacctattt
gatgtcagagactttgggaaggtgatctccgctttgtcgaggatctcccatcacagcata
tctcaaaacaagggcatcaggcctttcccgtctgaggacacagctctgaatgaggatgat
gtgtaccggagcctggaggagctggcagatgagcatgacttgggtgaggatgacatctac
gactgtgtgccgtgcgaggacgatggcgacgacatctatgaggacatcattaaggtggaa
gtacgacaaccgatgatcagatatatgcagaaaatgggaatgacagaggaggacaagaga
cactgttgcttagttgagatccaagagacggaagccaagtactacaagactctagaagac
attgagaagaactacatgattccactgaagcaaatcttaagtccgctggaaatggagaag
atttttgtcaaccttgaggatattatcagagtccactttggtctcctgcgagccattgac
ctgaccatggttagtggaggaagtggcctcggaaagatcttcatcgacttcaaggaaagg
ctgttgatctatggtcagtactgcagccacatggagaacgcacagaagacactggatgag
ttaacagcaacacgggaggacatcaagattaaagtagaggaatgtacgctgaaagtgcaa
gaagggaagttcaagctgcaggacttgttggttgttcccatgcagagggtgctaaaatat
cacctactactgaaggaacttctgagtcattcaactgaccgacctgagagacaacagctc
aaagaggctctggaggccatggaggacttggcgatgtatataaatgaagtcaaaagggac
aatgagacactgaagaaaatcagtgaattccaaaattctatagaaaatcttcagcaggtg
aaactggaggagtacggcaggccaaagatagacggagagctgaaggtgtcttctatcatc
aatagagcaaaacaggaccggtatatcttcctctttgacaaagtagtcattgtgtgcaag
aggaaaggctataattatgagctgaaggagattattgaactgcagtcgtacaaaatgtca
gatgacctcatgaacaacagagacatgaaaaagtcgagtggaaaaatgtggtcctacggc
ttctacctgatccatctgcaagggaagcagggcttccagttcttctgtaaaacggaagac
aataagaggatttggatggagcagtttgaaatggctatgtccaacataaagccggagaga
gccaccgccaatcagcacaacttccaaatgtacacatttgataagaacaccgactgtcga
gcttgcaagaagctcttgagaggcattttctatcagggctactactgctctcgctgtgga
accggagctcacaaagagtgtctggaagtgatcaccatctgtaaaatcaatcctcatgat
ttggaacctggattgtcaccaggtccaaagatggtggcagtgaggaactaccatggcaca
tcgcctcctccagggaagatgccgctgtgcttccaaacaggagacattattgagctgctc
aagggagatccagacaccacgtggtgggagggaaggctcattcaaacacaaaaaagtgga
tttttccccagttcttgtgtaaaaccttgcttggatccaaagccctttcagtcaatatcc
ttcagacagccgtcaagggaatcagactactacggatatccttggtttgcgggaaacatg
gagcgccagcaggcagacaaccttttaaaatcccacagcagcggaacctaccttatcaga
gagaggacagctgaggcggagaggtttgccatcagcatcaaattcaacgacgaagtaaag
cacatcaaagtcattgaaaaggacagctggattcacatcacagaggctaaaaagtttgaa
agtcttctggagctggtggaatattatcagtcgcactcactgaaagaaagcttcaaactg
ttggatactacgctccgctacccctacaagtcaagagagcgctcgctaacacgggccagc
acacgctcaccagcagccacctccgcctcctacaacttctccttcctcagtccacaaggc
ctcaacttctcctcctctcagagctcagctcccttttggtcagtcttcactcctcgggtg
gtcagcaccgccgtggccaggtataactttgctgcacgggacatgcgagaactgtcgctg
cgagaaggagacatcgtcaaaatctacagcaagattggtggagaccagggctggtggaaa
ggggaggccaacggaagaatcggatggtttccctcaacctacgtggatgaagaaggagtg
cagtaa
DBGET
integrated database retrieval system
